FFCP PHASE1:Hg19::chr3:52740108..52740179,+: Difference between revisions
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{{FFCP | 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0775453,178.536173629463,121.755441481076,131.330620281158,138.551294775045,127.556857408272,181.613807050807,126.056927620298,194.703085650892,60.8922960590836,166.634279742391,119.869852401905,364.259690469889,308.238774785658,244.99638188256,144.901131817613,134.611747509306,81.7325358372614,195.270778757199,123.515131148642,192.602948112847,144.84365413177,144.197114461746,113.360614868685,199.840711351072,123.44744680509,302.215142649285,165.519829432751,57.9902337890485,166.890710355554,128.007978850436,169.63396277966,374.345211380651,185.429939692847,234.030070121928,129.078363267481,153.648005006848,163.245322610294,93.4224320185352,152.705270946928,127.445130501245,436.413182418317,108.174036888866,78.0868324956715,216.557314849114,420.525941164455,185.628614664791,211.224030274348,116.107717589162,173.767943148609,95.4137416961852,118.841190540131,152.388141334057,162.327205153112,192.892348322636,186.868755178676,130.534013410405,124.749778393306,75.9537562580368,100.447459256045,177.492479981707,88.8618139469913,156.390678658524,310.65476066654,196.331767446764,93.8834670433929,79.369425108295,161.214175718843,150.40297831977,46.3143973415442,326.542565344591,203.05771325365,166.251352685117,214.657234446801,164.269624746084,155.413399217824,167.219314321051,138.477024565667,185.111340598348,124.356283481915,76.3966027881716,161.693920798589,205.287154346861,131.627679119027,224.114005996697,170.10291276297,155.071798373949,161.738789479791,141.603385568113,186.439111804842,194.093007641481,244.349588643424,215.405321733577,125.270792416246,97.3344139529715,157.439390626186,116.145142527891,158.495897843775,146.647099975586,135.994729316848,93.7862270015548,224.367895051465,95.1692492768155,204.679025595101,186.962384385762,105.168439907498,237.163039520148,122.555343594491,150.040755645719,171.066589320341,117.378335701562,141.779193258127,215.385115518549,212.138613541821,259.14331071215,204.011108958323,161.275984218415,373.633879482728,154.105121740134,132.807050416984,94.0084822241463,147.917448182501,208.618756194813,185.967106328388,194.025648833354,99.9162740025908,128.580091086291,141.648336720925,132.342676253977,97.5193761587928,288.178886832176,189.03206008615,154.41753236408,139.556435401952,145.79138626233,189.057212811947,175.575958801272,162.338253994455,103.056538061494,165.320658764581,75.2981900919066,208.753769695708,173.634297378556,99.9935013415847,135.496427379141,31.2905683867191,121.368097535389,246.196602088883|short_description=p1@SPCS1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=28972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23401 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000448693,ENST00000474945_5end | |||
|description=CAGE_peak_1_at_SPCS1_5end | |||
|id=chr3:52740108..52740179,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.07e-11!679;CL:0000004!1.07e-11!679;CL:0000255!1.07e-11!679;CL:0000055!1.12e-11!180;CL:0000012!3.64e-11!682;CL:0000183!1.74e-10!59;CL:0000680!1.31e-09!57;CL:0000056!1.31e-09!57;CL:0000355!1.31e-09!57;CL:0002371!1.51e-09!591;CL:0000144!2.17e-09!625;CL:0000187!3.83e-09!54;CL:0000393!4.23e-09!60;CL:0000211!4.23e-09!60;CL:0000192!4.75e-09!42;CL:0000514!4.75e-09!42;CL:0000359!9.91e-08!32;CL:0000220!1.39e-07!246;CL:0002321!3.03e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.27e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.27e-09,58;CL:0000056,3.27e-09,58;CL:0000355,3.27e-09,58;CL:0000187,9.53e-09,55;CL:0000393,9.89e-09,61;CL:0000211,9.89e-09,61;CL:0000192,1.38e-08,43;CL:0000514,1.38e-08,43;CL:0000359,9.91e-08,32;CL:0002321,3.32e-07,250 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!4.90e-09!82;UBERON:0004290!6.73e-09!70;UBERON:0005256!1.74e-08!143;UBERON:0000914!3.31e-08!83;UBERON:0002329!3.31e-08!83;UBERON:0003077!3.31e-08!83;UBERON:0003059!3.31e-08!83;UBERON:0007282!3.31e-08!83;UBERON:0009618!3.31e-08!83;UBERON:0007285!3.31e-08!83;UBERON:0001134!3.59e-08!61;UBERON:0002036!3.59e-08!61;UBERON:0003082!3.59e-08!61;UBERON:0003104!6.77e-08!238;UBERON:0009142!6.77e-08!238;UBERON:0002385!9.75e-08!63;UBERON:0001015!9.75e-08!63;UBERON:0000383!9.75e-08!63;UBERON:0001737!6.75e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.75e-07;9!UBERON:0001557;6.75e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.22e-09,78;UBERON:0000486,9.82e-09,83;UBERON:0007524,1.21e-08,73;UBERON:0002329,1.44e-08,71;UBERON:0003059,1.44e-08,71;UBERON:0007282,1.44e-08,71;UBERON:0004290,1.44e-08,71;UBERON:0009618,1.44e-08,71;UBERON:0003077,2.89e-08,72;UBERON:0007285,2.89e-08,72;UBERON:0001134,7.79e-08,62;UBERON:0002036,7.79e-08,62;UBERON:0003082,7.79e-08,62;UBERON:0005256,1.23e-07,122;UBERON:0002385,2.02e-07,64;UBERON:0001015,2.02e-07,64;UBERON:0000383,2.02e-07,64;UBERON:0003104,4.42e-07,160;UBERON:0009142,4.42e-07,160;UBERON:0001737,6.75e-07,9;UBERON:0002100,9.16e-07,199 | |||
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1,229.208098382278,282.723518634199,145.677502765606,157.801954524402,203.60864744326,311.907420496005,231.502522633983,155.048139295947,145.294677371959,248.492342779754,141.305882517451,249.362392758499,164.263075555681,162.985576344098,182.405482727268,241.435841428139,178.17813600083,206.939362393546,127.749953709197,122.176124492805,171.968994934839,174.237205710616,213.749622780685,103.774277200131,15.3295905680367,127.640336101727,248.954324502511,102.217358865645,93.9557738447903,64.6085722119133,177.314952443104,202.594694720461,141.267532560705,105.47805180416,225.547727097545,73.3924482022959,171.826120612055,166.232786354813,163.858015109523,231.206154078145,292.715708951417,144.731803545293,99.8370966797849,203.513485956714,217.587388696824,228.492185916052,110.91212853489,142.379559638663,150.658900511901,206.292332873549,221.601648925345,143.830480666165,129.677213245831,197.216073266129,209.763310670154,212.979207259263,219.152442190958,151.798316979886,369.239729192525,379.393234637357,341.936966034551,86.205737924991,165.416429309918,215.540847558558,142.206674857758,305.70795945248,234.537193374632,142.986949735875,116.232456931825,191.27508475468,114.180033615301,125.902359417312,82.846668787524,181.022467186724,254.533169189531,347.99408377228,75.2678257993937,96.3895299232975,113.155703100851,134.369783196167,149.802987037333,132.460542806761,145.589147223967,142.656976974685,164.73545761765,96.6473985054179,241.97868058121,104.606095599252,152.695054832862,115.936156076561,168.973511564768,236.117676012346,302.022322890576,180.448883708498,160.63887269176,157.239316042745,220.747853469687,179.725535272516,255.765502152705,166.106435626253,183.141432475875,260.714687927785,254.927836194173,177.393873574279,223.363257237456,194.281667086379,122.499213948887,174.523607519479,157.902427143156,243.017837794741,201.50801963496,176.349830892366,194.583603651398,193.068242569579,114.33067603051,168.573707080773,137.055870786215,190.717875310061,181.531725246569,203.614132213545,241.407180743503,220.570915141677,65.6161470788985,185.300276851826,81.4878047224718,262.560257717003,146.905439731952,228.2811596833,231.520922463118,261.648796820053,188.368882768193,244.063147181101,166.44117548102,148.543809468604,132.957700793968,352.332088058427,276.344273384959,153.753137825755,98.7165234123358,157.252269233386,100.844413797843,151.461555080912,270.933344995983,360.303084232953,92.9773342777959,270.382959195865,250.725564781231,508.034189999406,77.1821696850897,139.920522191399,349.279130775453,178.536173629463,121.755441481076,131.330620281158,138.551294775045,127.556857408272,181.613807050807,126.056927620298,194.703085650892,60.8922960590836,166.634279742391,119.869852401905,364.259690469889,308.238774785658,244.99638188256,144.901131817613,134.611747509306,81.7325358372614,195.270778757199,123.515131148642,192.602948112847,144.84365413177,144.197114461746,113.360614868685,199.840711351072,123.44744680509,302.215142649285,165.519829432751,57.9902337890485,166.890710355554,128.007978850436,169.63396277966,374.345211380651,185.429939692847,234.030070121928,129.078363267481,153.648005006848,163.245322610294,93.4224320185352,152.705270946928,127.445130501245,436.413182418317,108.174036888866,78.0868324956715,216.557314849114,420.525941164455,185.628614664791,211.224030274348,116.107717589162,173.767943148609,95.4137416961852,118.841190540131,152.388141334057,162.327205153112,192.892348322636,186.868755178676,130.534013410405,124.749778393306,75.9537562580368,100.447459256045,177.492479981707,88.8618139469913,156.390678658524,310.65476066654,196.331767446764,93.8834670433929,79.369425108295,161.214175718843,150.40297831977,46.3143973415442,326.542565344591,203.05771325365,166.251352685117,214.657234446801,164.269624746084,155.413399217824,167.219314321051,138.477024565667,185.111340598348,124.356283481915,76.3966027881716,161.693920798589,205.287154346861,131.627679119027,224.114005996697,170.10291276297,155.071798373949,161.738789479791,141.603385568113,186.439111804842,194.093007641481,244.349588643424,215.405321733577,125.270792416246,97.3344139529715,157.439390626186,116.145142527891,158.495897843775,146.647099975586,135.994729316848,93.7862270015548,224.367895051465,95.1692492768155,204.679025595101,186.962384385762,105.168439907498,237.163039520148,122.555343594491,150.040755645719,171.066589320341,117.378335701562,141.779193258127,215.385115518549,212.138613541821,259.14331071215,204.011108958323,161.275984218415,373.633879482728,154.105121740134,132.807050416984,94.0084822241463,147.917448182501,208.618756194813,185.967106328388,194.025648833354,99.9162740025908,128.580091086291,141.648336720925,132.342676253977,97.5193761587928,288.178886832176,189.03206008615,154.41753236408,139.556435401952,145.79138626233,189.057212811947,175.575958801272,162.338253994455,103.056538061494,165.320658764581,75.2981900919066,208.753769695708,173.634297378556,99.9935013415847,135.496427379141,31.2905683867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| |||
|short_description=p1@SPCS1 | |||
}} |
Revision as of 00:51, 13 September 2013
Short description: | p1@SPCS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SPCS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000448693, ENST00000474945_5end |
EntrezGene: | SPCS1 |
HGNC: | 23401 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.27e-09 | 58 |
myoblast | 3.27e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.27e-09 | 58 |
muscle cell | 9.53e-09 | 55 |
electrically responsive cell | 9.89e-09 | 61 |
electrically active cell | 9.89e-09 | 61 |
smooth muscle cell | 1.38e-08 | 43 |
smooth muscle myoblast | 1.38e-08 | 43 |
vascular associated smooth muscle cell | 9.91e-08 | 32 |
embryonic cell | 3.32e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.22e-09 | 78 |
multilaminar epithelium | 9.82e-09 | 83 |
dense mesenchyme tissue | 1.21e-08 | 73 |
somite | 1.44e-08 | 71 |
presomitic mesoderm | 1.44e-08 | 71 |
presumptive segmental plate | 1.44e-08 | 71 |
dermomyotome | 1.44e-08 | 71 |
trunk paraxial mesoderm | 1.44e-08 | 71 |
paraxial mesoderm | 2.89e-08 | 72 |
presumptive paraxial mesoderm | 2.89e-08 | 72 |
skeletal muscle tissue | 7.79e-08 | 62 |
striated muscle tissue | 7.79e-08 | 62 |
myotome | 7.79e-08 | 62 |
trunk mesenchyme | 1.23e-07 | 122 |
muscle tissue | 2.02e-07 | 64 |
musculature | 2.02e-07 | 64 |
musculature of body | 2.02e-07 | 64 |
mesenchyme | 4.42e-07 | 160 |
entire embryonic mesenchyme | 4.42e-07 | 160 |
larynx | 6.75e-07 | 9 |
trunk | 9.16e-07 | 199 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.