FFCP PHASE1:Hg19::chr3:58256724..58256748,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C63|description=CAGE_peak_at_chr3:58256724..58256748,+|id=chr3:58256724..58256748,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005754;4.06e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.02e-19;3!DOID:127;1.02e-19;3!DOID:0060072;6.13e-15;4!DOID:3571;1.04e-07;1!DOID:171;9.94e-07;10|ontology_enrichment_disease_v019_2=DOID:0060084,6.09e-20,3;DOID:127,6.09e-20,3;DOID:0060072,4.18e-15,4;DOID:3571,1.64e-07,1;DOID:171,9.96e-07,10|ontology_enrichment_uberon=UBERON:0001049!2.37e-12!57;UBERON:0005068!2.37e-12!57;UBERON:0006241!2.37e-12!57;UBERON:0007135!2.37e-12!57;UBERON:0005743!8.38e-11!86;UBERON:0000073!1.55e-10!94;UBERON:0001016!1.55e-10!94;UBERON:0002780!1.69e-10!41;UBERON:0001890!1.69e-10!41;UBERON:0006240!1.69e-10!41;UBERON:0001017!1.97e-10!82;UBERON:0002616!3.13e-10!59;UBERON:0003080!5.46e-10!42;UBERON:0002346!2.31e-09!90;UBERON:0002020!3.34e-09!34;UBERON:0003528!3.34e-09!34;UBERON:0001893!6.83e-09!34;UBERON:0002791!9.20e-09!33;UBERON:0000955!1.72e-08!69;UBERON:0006238!1.72e-08!69;UBERON:0003075!3.19e-08!86;UBERON:0007284!3.19e-08!86;UBERON:0007023!3.25e-08!115;UBERON:0003056!4.21e-08!61;UBERON:0001869!6.95e-08!32;UBERON:0000956!1.48e-07!25;UBERON:0000203!1.48e-07!25;UBERON:0000477!8.31e-07!286;UBERON:0002619!9.25e-07!22|ontology_enrichment_uberon_v019=UBERON:0006947;1.01e-09;3!UBERON:0004054;1.01e-09;3!UBERON:0000998;4.06e-08;1!UBERON:0006868;4.06e-08;1!UBERON:0002346;7.70e-08;4!UBERON:0000923;7.70e-08;4!UBERON:0010316;7.70e-08;4!UBERON:0005291;7.70e-08;4!UBERON:0002038;1.04e-07;1!UBERON:0001000;1.04e-07;1!UBERON:0009661;1.04e-07;1!UBERON:0002950;1.04e-07;1!UBERON:0005352;1.04e-07;1!UBERON:0001891;1.04e-07;1!UBERON:0004175;1.67e-07;21!UBERON:0005904;1.70e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.30e-10,3;UBERON:0004054,9.30e-10,3;UBERON:0004175,7.33e-09,25;UBERON:0000998,4.35e-08,1;UBERON:0006868,4.35e-08,1;UBERON:0001000,8.51e-08,1;UBERON:0005352,8.51e-08,1;UBERON:0005904,1.59e-07,4;UBERON:0002038,1.99e-07,1;UBERON:0009661,1.99e-07,1;UBERON:0002950,1.99e-07,1;UBERON:0001891,1.99e-07,1;UBERON:0009616,1.99e-07,1;UBERON:0010286,1.99e-07,1|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,2.00146596706261,0,0,2.53299878168311,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0,0.204000691244253,0,0.286235987131057,0.273748850145768,0.125542639594803,0.229240217243854,0.57470412614962,0.314843125254717,0,0,0,0.919421224478927,0,0,0,0.284338464974843,0,0,0,0,0.223915474239924,0,0.257575567634187,0,0.377875943688809,0,0,0.411167888021826,0,0.28769239232215,0,0.709446689665756,0.344745680736619,0,0,0,0.545812300115692,0,0.612167784741805,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0.425208599930087,0,0.22465726229299,0.150176892841506,0,0,0,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.261958150995425,0.364295288292542,0,0,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0,0,0,0.267899184852239,0.22452937262617,0,0,0,0.366403487860815,0,0,0.436094052142534,0,0.25326102332916,0,0,0,0.560677600142307,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.201504196455281,0,0.193260853163297,0,0,0.243947412259191,0,0,0,0,0.36497735907583,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0.241011029883482,0.661763836394364,0,0,0,0.196221465125346,0.38474715694639,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.491953754172454,0,0.109750285408626,0,0,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0.141775097242386,0,0,0,0.492663237895943,0.264145302039678,0,0.144119953416961,0.25248486685276,0,0,0,1.71072446022705,0.925447434329912,1.20137223137567,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,1.08524321078289,0.823240336780769,0,0.355391948742546,0,0,0,0,1.2162378064119,0,2.10833939483032,0,0,0,0,0.410952645100767,0,0,0,0,0.128343036279748,0.508189248444927,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0.234282829985426,0,0,0,0,0,0.08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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_at_chr3:58256724..58256748,+ | |||
|id=chr3:58256724..58256748,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;4.06e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.02e-19;3!DOID:127;1.02e-19;3!DOID:0060072;6.13e-15;4!DOID:3571;1.04e-07;1!DOID:171;9.94e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.09e-20,3;DOID:127,6.09e-20,3;DOID:0060072,4.18e-15,4;DOID:3571,1.64e-07,1;DOID:171,9.96e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.37e-12!57;UBERON:0005068!2.37e-12!57;UBERON:0006241!2.37e-12!57;UBERON:0007135!2.37e-12!57;UBERON:0005743!8.38e-11!86;UBERON:0000073!1.55e-10!94;UBERON:0001016!1.55e-10!94;UBERON:0002780!1.69e-10!41;UBERON:0001890!1.69e-10!41;UBERON:0006240!1.69e-10!41;UBERON:0001017!1.97e-10!82;UBERON:0002616!3.13e-10!59;UBERON:0003080!5.46e-10!42;UBERON:0002346!2.31e-09!90;UBERON:0002020!3.34e-09!34;UBERON:0003528!3.34e-09!34;UBERON:0001893!6.83e-09!34;UBERON:0002791!9.20e-09!33;UBERON:0000955!1.72e-08!69;UBERON:0006238!1.72e-08!69;UBERON:0003075!3.19e-08!86;UBERON:0007284!3.19e-08!86;UBERON:0007023!3.25e-08!115;UBERON:0003056!4.21e-08!61;UBERON:0001869!6.95e-08!32;UBERON:0000956!1.48e-07!25;UBERON:0000203!1.48e-07!25;UBERON:0000477!8.31e-07!286;UBERON:0002619!9.25e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.01e-09;3!UBERON:0004054;1.01e-09;3!UBERON:0000998;4.06e-08;1!UBERON:0006868;4.06e-08;1!UBERON:0002346;7.70e-08;4!UBERON:0000923;7.70e-08;4!UBERON:0010316;7.70e-08;4!UBERON:0005291;7.70e-08;4!UBERON:0002038;1.04e-07;1!UBERON:0001000;1.04e-07;1!UBERON:0009661;1.04e-07;1!UBERON:0002950;1.04e-07;1!UBERON:0005352;1.04e-07;1!UBERON:0001891;1.04e-07;1!UBERON:0004175;1.67e-07;21!UBERON:0005904;1.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.30e-10,3;UBERON:0004054,9.30e-10,3;UBERON:0004175,7.33e-09,25;UBERON:0000998,4.35e-08,1;UBERON:0006868,4.35e-08,1;UBERON:0001000,8.51e-08,1;UBERON:0005352,8.51e-08,1;UBERON:0005904,1.59e-07,4;UBERON:0002038,1.99e-07,1;UBERON:0009661,1.99e-07,1;UBERON:0002950,1.99e-07,1;UBERON:0001891,1.99e-07,1;UBERON:0009616,1.99e-07,1;UBERON:0010286,1.99e-07,1 | |||
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| |||
|short_description=p@chr3:58256724..58256748,+ | |||
}} |
Revision as of 01:01, 13 September 2013
Short description: | p@chr3:58256724..58256748, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:58256724..58256748, + |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 9.30e-10 | 3 |
internal male genitalia | 9.30e-10 | 3 |
internal genitalia | 7.33e-09 | 25 |
seminal vesicle | 4.35e-08 | 1 |
seminal fluid secreting gland | 4.35e-08 | 1 |
vas deferens | 8.51e-08 | 1 |
spermatic cord | 8.51e-08 | 1 |
duct of male reproductive system | 1.59e-07 | 4 |
substantia nigra | 1.99e-07 | 1 |
midbrain nucleus | 1.99e-07 | 1 |
regional part of midbrain | 1.99e-07 | 1 |
midbrain | 1.99e-07 | 1 |
presumptive midbrain | 1.99e-07 | 1 |
midbrain neural tube | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.09e-20 | 3 |
leiomyoma | 6.09e-20 | 3 |
benign neoplasm | 4.18e-15 | 4 |
liver cancer | 1.64e-07 | 1 |
neuroectodermal tumor | 9.96e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.