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FFCP PHASE1:Mm9::chr13:72101178..72101203,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=16371|HGNC=|MCL_coexpression_id=2082|UniProt=G5E8H6,P81068|association_with_transcript=-7bp_to_ENSMUST00000077337,NM_010573,uc007rdd.1_5end|description=CAGE_peak_1_at_Irx1_5end|id=chr13:72101178..72101203,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.88e-10!17;UBERON:0005181!1.88e-10!17;UBERON:0002224!1.88e-10!17;UBERON:0000915!1.88e-10!17;UBERON:0008947!1.88e-10!17;UBERON:0003258!1.88e-10!17;UBERON:0005153!1.86e-09!17;UBERON:0002048!1.89e-08!14;UBERON:0000117!1.89e-08!14;UBERON:0000171!1.89e-08!14;UBERON:0000170!1.89e-08!14;UBERON:0005597!1.89e-08!14;UBERON:0000118!1.89e-08!14;UBERON:0003103!9.13e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.30e-11,17;UBERON:0005181,1.30e-11,17;UBERON:0002224,1.30e-11,17;UBERON:0000915,1.30e-11,17;UBERON:0008947,1.30e-11,17;UBERON:0003258,1.30e-11,17;UBERON:0005153,7.14e-10,17;UBERON:0002048,2.37e-09,14;UBERON:0000117,2.37e-09,14;UBERON:0000171,2.37e-09,14;UBERON:0000170,2.37e-09,14;UBERON:0005597,2.37e-09,14;UBERON:0000118,2.37e-09,14;UBERON:0003103,1.01e-08,43;UBERON:0000489,2.60e-07,21;UBERON:0002113,2.67e-07,14;UBERON:0003918,2.67e-07,14;UBERON:0011143,2.67e-07,14;UBERON:0005095,2.67e-07,14;UBERON:0007687,2.67e-07,14;UBERON:0005157,2.68e-07,20|phase1_expression=20.4990524294136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68688044031483,7.90740063512214,3.85448179539531,1.56478268869608,0,0.439372365468944,1.36100929351998,2.65974201088189,27.3129872293446,0,0,0,0,0.286533439938757,0,32.9775831201144,23.2756030879694,23.4517619297286,1.69422266034566,2.66788438833342,0.449949858640699,0.988866362566974,0,6.89080254192331,17.6740420447915,0.103689612308478,0,0,6.56997264128748,5.30084498283872,0.367472397644862,0.0958454710182364,0,5.50579404996943,4.97980618532232,4.76180253094355,14.7712642257817,13.7231465403614,11.4600941522487,10.3297709630511,3.37657566019008,4.5839474333043,5.59794312399969,3.70166370077668,5.59198337475902,0.075726193333184,0.226714680320357,0,0,0.679971333707751,0,0,0,6.74133216632409,6.64678258054425,10.3914401841148,7.0667914902068,1.97180787687353,0,2.54805239706646,0,24.246996593256,23.3091076237091,29.3204178108574,3.88225191044804,0.258937883647172,0,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,0.587943535678524,0,0.494389935468748,0.289198713839823,0,0,0,0.484875253135222,0,2.04946557908083,1.25668024088073,0,0,0,0,7.48953197024113,0.915001205637253,0.251308704225729,0,0,3.53239675751252,1.94689515681309,4.58277137326423,1.8661045591514,6.57079171927554,247.05873881072,16.1349349273753,6.66716102857071,9.36323074987816,5.12396380641431,4.08218994907967,2.8185018462667,5.34099829990454,40.6164292060255,2.37124792226126,13.4265316919152,14.7798944297717,17.9740500590611,15.2925987074079,8.00979983000983,7.20237477427802,0,0,0,0,4.34964122324554,3.98694301967864,3.42117916775928,5.91861838963026,4.13204886669548,3.23960937063494,2.79040733700489,5.09719462659276,4.90414437942112,2.96207729844265,2.79084688934462,3.64809642956351,2.48539978623065,3.73235195994786,3.22095405024892,0,0.102904612379284,0,0,0.639864751605702,0.232236671860439,0.515469845288373,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,4.36236172192088,6.39791670614481,9.01661885384643,12.0154283428735,12.6069116658957,20.1289803085214,19.4768534342712,19.4845395333075,15.5428740562961,21.4711065223933,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0,0.50925170356284,0.863088412352432,0,0,0,0.372140947668503,0,0,0,0,21.0618636789929,7.20067364727842,10.2667935158476,8.65699937453459,15.7242466353296,14.4055381399962,20.4717531161972,46.4418081901561,10.0886492227962,15.0595988961167,12.9158362612565,17.6972379892997,12.6060036762104,19.0936757327595,0,0,79.6658122290839,88.5756955638191,4.65596710964597,4.57125577709592,20.1639982813311,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.488660878060728,0,0,3.39892890616974,1.81394134178851,0.754420319023592,1.77181135728464,1.84461088766356,0.775284879504663,1.45413491791002,1.06949213515416,0,0,1.03135543248187,0,5.76195500900193,0.129358683782755,0.643011105094777,0,0.713475270408282,0.987294123612726,0.304464949114599,0.23467170806371,0.21183207086382,0.661585194164886,17.9726015706213,26.9645592582162,19.0588842772972,13.130957840345,11.9822856813895,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,1.08005340821801,0.836353184057875,1.74690050996942,2.56242258131159,2.64491058321075,1.30877970992015,0,17.3975007664339,0,0,0,0,0.516639293910924,0.168956125490778,0.234714477291508,1.5624526181274,0.209718688851422,0.483168241652012,0,0,0.810900861160657,0.410843828659309,0.129920822977795,0.358053391334963,0,0,0,0,0,0,0.292373642219257,0,0,1.13365191807606,3.7737612073591,23.4153165750732,6.71538465456314,0,0,0,5.57357785605571,32.1006146582633,1.12950368523413,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,8.40677515431831,9.97562183502578,9.04888110496911,8.0225216632537,4.19226325255965,5.33146174505041,4.66718128383392,4.53277125925567,5.13470735346904,7.32821914115013,4.30914809813408,6.03604292435444,5.24392441831341,7.61899313617944,4.47996657853783,10.0021675169445,4.86714168968393,6.94473193669338,8.24171801606613,4.85756436443511,6.51451579532289,5.50174999093946,5.48403236878838,6.39524233182245,7.43464105281112,5.16149108139227,4.39027134894654,5.78753365163254,4.34573164306758,6.17256498823512,6.64356101495375,5.41774653065599,5.32000356120596,5.88759996506671,8.29498427218908,12.4905288968973,9.35726433781634,6.66100267549725,2.48674831689496,2.20591419119516,0.463735671240843|short_description=p1@Irx1}}
|EntrezGene=16371
|HGNC=
|MCL_coexpression_id=2082
|UniProt=G5E8H6,P81068
|association_with_transcript=-7bp_to_ENSMUST00000077337,NM_010573,uc007rdd.1_5end
|description=CAGE_peak_1_at_Irx1_5end
|id=chr13:72101178..72101203,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!1.88e-10!17;UBERON:0005181!1.88e-10!17;UBERON:0002224!1.88e-10!17;UBERON:0000915!1.88e-10!17;UBERON:0008947!1.88e-10!17;UBERON:0003258!1.88e-10!17;UBERON:0005153!1.86e-09!17;UBERON:0002048!1.89e-08!14;UBERON:0000117!1.89e-08!14;UBERON:0000171!1.89e-08!14;UBERON:0000170!1.89e-08!14;UBERON:0005597!1.89e-08!14;UBERON:0000118!1.89e-08!14;UBERON:0003103!9.13e-08!43
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.30e-11,17;UBERON:0005181,1.30e-11,17;UBERON:0002224,1.30e-11,17;UBERON:0000915,1.30e-11,17;UBERON:0008947,1.30e-11,17;UBERON:0003258,1.30e-11,17;UBERON:0005153,7.14e-10,17;UBERON:0002048,2.37e-09,14;UBERON:0000117,2.37e-09,14;UBERON:0000171,2.37e-09,14;UBERON:0000170,2.37e-09,14;UBERON:0005597,2.37e-09,14;UBERON:0000118,2.37e-09,14;UBERON:0003103,1.01e-08,43;UBERON:0000489,2.60e-07,21;UBERON:0002113,2.67e-07,14;UBERON:0003918,2.67e-07,14;UBERON:0011143,2.67e-07,14;UBERON:0005095,2.67e-07,14;UBERON:0007687,2.67e-07,14;UBERON:0005157,2.68e-07,20
|phase1_expression=20.4990524294136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.3577272795174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.68688044031483,7.90740063512214,3.85448179539531,1.56478268869608,0,0.439372365468944,1.36100929351998,2.65974201088189,27.3129872293446,0,0,0,0,0.286533439938757,0,32.9775831201144,23.2756030879694,23.4517619297286,1.69422266034566,2.66788438833342,0.449949858640699,0.988866362566974,0,6.89080254192331,17.6740420447915,0.103689612308478,0,0,6.56997264128748,5.30084498283872,0.367472397644862,0.0958454710182364,0,5.50579404996943,4.97980618532232,4.76180253094355,14.7712642257817,13.7231465403614,11.4600941522487,10.3297709630511,3.37657566019008,4.5839474333043,5.59794312399969,3.70166370077668,5.59198337475902,0.075726193333184,0.226714680320357,0,0,0.679971333707751,0,0,0,6.74133216632409,6.64678258054425,10.3914401841148,7.0667914902068,1.97180787687353,0,2.54805239706646,0,24.246996593256,23.3091076237091,29.3204178108574,3.88225191044804,0.258937883647172,0,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,0.587943535678524,0,0.494389935468748,0.289198713839823,0,0,0,0.484875253135222,0,2.04946557908083,1.25668024088073,0,0,0,0,7.48953197024113,0.915001205637253,0.251308704225729,0,0,3.53239675751252,1.94689515681309,4.58277137326423,1.8661045591514,6.57079171927554,247.05873881072,16.1349349273753,6.66716102857071,9.36323074987816,5.12396380641431,4.08218994907967,2.8185018462667,5.34099829990454,40.6164292060255,2.37124792226126,13.4265316919152,14.7798944297717,17.9740500590611,15.2925987074079,8.00979983000983,7.20237477427802,0,0,0,0,4.34964122324554,3.98694301967864,3.42117916775928,5.91861838963026,4.13204886669548,3.23960937063494,2.79040733700489,5.09719462659276,4.90414437942112,2.96207729844265,2.79084688934462,3.64809642956351,2.48539978623065,3.73235195994786,3.22095405024892,0,0.102904612379284,0,0,0.639864751605702,0.232236671860439,0.515469845288373,0,0,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0,0,4.36236172192088,6.39791670614481,9.01661885384643,12.0154283428735,12.6069116658957,20.1289803085214,19.4768534342712,19.4845395333075,15.5428740562961,21.4711065223933,0.296452627087149,0.333690211432188,0.196558995113203,0,0,0,0.50925170356284,0.863088412352432,0,0,0,0.372140947668503,0,0,0,0,21.0618636789929,7.20067364727842,10.2667935158476,8.65699937453459,15.7242466353296,14.4055381399962,20.4717531161972,46.4418081901561,10.0886492227962,15.0595988961167,12.9158362612565,17.6972379892997,12.6060036762104,19.0936757327595,0,0,79.6658122290839,88.5756955638191,4.65596710964597,4.57125577709592,20.1639982813311,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.488660878060728,0,0,3.39892890616974,1.81394134178851,0.754420319023592,1.77181135728464,1.84461088766356,0.775284879504663,1.45413491791002,1.06949213515416,0,0,1.03135543248187,0,5.76195500900193,0.129358683782755,0.643011105094777,0,0.713475270408282,0.987294123612726,0.304464949114599,0.23467170806371,0.21183207086382,0.661585194164886,17.9726015706213,26.9645592582162,19.0588842772972,13.130957840345,11.9822856813895,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0.316335993581135,0.609958401380546,1.08005340821801,0.836353184057875,1.74690050996942,2.56242258131159,2.64491058321075,1.30877970992015,0,17.3975007664339,0,0,0,0,0.516639293910924,0.168956125490778,0.234714477291508,1.5624526181274,0.209718688851422,0.483168241652012,0,0,0.810900861160657,0.410843828659309,0.129920822977795,0.358053391334963,0,0,0,0,0,0,0.292373642219257,0,0,1.13365191807606,3.7737612073591,23.4153165750732,6.71538465456314,0,0,0,5.57357785605571,32.1006146582633,1.12950368523413,0.460325236507177,0,0.171853182343688,0,0.755393897389701,0,0,0,0,8.40677515431831,9.97562183502578,9.04888110496911,8.0225216632537,4.19226325255965,5.33146174505041,4.66718128383392,4.53277125925567,5.13470735346904,7.32821914115013,4.30914809813408,6.03604292435444,5.24392441831341,7.61899313617944,4.47996657853783,10.0021675169445,4.86714168968393,6.94473193669338,8.24171801606613,4.85756436443511,6.51451579532289,5.50174999093946,5.48403236878838,6.39524233182245,7.43464105281112,5.16149108139227,4.39027134894654,5.78753365163254,4.34573164306758,6.17256498823512,6.64356101495375,5.41774653065599,5.32000356120596,5.88759996506671,8.29498427218908,12.4905288968973,9.35726433781634,6.66100267549725,2.48674831689496,2.20591419119516,0.463735671240843
|short_description=p1@Irx1
}}

Revision as of 01:04, 13 September 2013

Short description:p1@Irx1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Irx1_5end
Coexpression cluster:MCL_coexpression_mm9:2082
Association with transcript: -7bp_to_ENSMUST00000077337, NM_010573, uc007rdd.1_5end
EntrezGene:Irx1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Irx1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.50
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.36
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.69
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C332.98
Mouse Granule cells, donor2.CNhs12357.11731-123E323.28
Mouse Granule cells, donor3.CNhs12108.11636-122C723.45
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C86.89
Mouse Microglia, donor2.CNhs12634.11736-123E817.67
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I87.07
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G223.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G329.32
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.88
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.58
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G4247.06
eyeball, embryo E12.CNhs11016.345-16C616.13
eyeball, embryo E14.CNhs10521.399-16E26.67
eyeball, embryo E15.CNhs10593.426-16C99.36
eyeball, embryo E17.CNhs11023.1261-18D45.12
eyeball, neonate N00.CNhs11207.633-15C64.08
eyeball, neonate N01.CNhs11140.1532-43E72.82
eyeball, neonate N02.CNhs11205.1551-44G85.34
eyeball, neonate N16.CNhs11188.777-19A240.62
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H213.43
forelimb, embryo E13.CNhs10589.384-1E214.78
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E715.29
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.42
heart, embryo E14.CNhs10597.403-26D45.92
heart, embryo E15.CNhs11017.431-16C84.13
heart, embryo E16.CNhs11021.457-17C63.24
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E34.90
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G12.79
heart, neonate N16.CNhs11209.782-15G13.65
heart, neonate N20.CNhs11127.821-26I62.49
heart, neonate N25.CNhs11196.1351-25D33.73
heart, neonate N30.CNhs11202.1390-42D23.22
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I94.36
kidney, embryo E15.CNhs10997.434-16F86.40
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C712.61
kidney, neonate N00.CNhs11214.646-21G720.13
kidney, neonate N10.CNhs11206.758-6D519.48
kidney, neonate N20.CNhs11113.832-19I119.48
kidney, neonate N25.CNhs11122.1353-25F315.54
kidney, neonate N30.CNhs11203.1385-42H121.47
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B121.06
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F810.27
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B615.72
lung, embryo E17.CNhs10605.480-44A614.41
lung, embryo E18.CNhs10583.1287-20I620.47
lung, neonate N00.CNhs11224.640-42C646.44
lung, neonate N06.CNhs11212.683-20E510.09
lung, neonate N07.CNhs11111.715-19A315.06
lung, neonate N10.CNhs11219.750-23E612.92
lung, neonate N20.CNhs11109.822-18A417.70
lung, neonate N25.CNhs11119.1359-25C712.61
lung, neonate N30.CNhs11133.1394-42H219.09
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B679.67
mammary gland, adult pregnant day19.CNhs10476.588-5H288.58
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.84
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E65.76
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C317.97
skin, neonate N00.CNhs11124.650-25G426.96
skin, neonate N03.CNhs11215.662-22H319.06
skin, neonate N06.CNhs11097.693-20I513.13
skin, neonate N10.CNhs11108.762-6C411.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.48
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I41.56
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.13
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F723.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.72
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D55.57
vesicular gland, adult.CNhs10491.51-27F832.10
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I88.41
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H29.05
whole body, embryo E14.5.CNhs10578.420-27D28.02
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.31
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G55.50
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.35
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G56.64
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.42
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F98.29
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B39.36
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element1.30e-1117
thoracic segment organ1.30e-1117
thoracic cavity1.30e-1117
thoracic segment of trunk1.30e-1117
respiratory primordium1.30e-1117
endoderm of foregut1.30e-1117
epithelial bud7.14e-1017
lung2.37e-0914
respiratory tube2.37e-0914
respiration organ2.37e-0914
pair of lungs2.37e-0914
lung primordium2.37e-0914
lung bud2.37e-0914
compound organ1.01e-0843
cavitated compound organ2.60e-0721
kidney2.67e-0714
kidney mesenchyme2.67e-0714
upper urinary tract2.67e-0714
kidney rudiment2.67e-0714
kidney field2.67e-0714
epithelial fold2.68e-0720







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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