FFCP PHASE1:Mm9::chr13:83871972..83871975,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=320203|HGNC=|MCL_coexpression_id=1049|UniProt=|association_with_transcript=-198bp_to_uc007rim.1_5end|description=CAGE_peak_2_at_C130071C03Rik_5end|id=chr13:83871972..83871975,+|ontology_enrichment_celltype=CL:0000540!2.86e-22!33;CL:0000047!2.86e-22!33;CL:0000031!2.86e-22!33;CL:0000404!2.86e-22!33;CL:0000221!1.46e-21!44;CL:0000133!1.46e-21!44;CL:0002319!9.49e-21!43;CL:0000393!1.76e-17!39;CL:0000211!1.76e-17!39;CL:0000055!1.84e-16!50;CL:0000117!1.02e-12!23;CL:0000337!1.02e-12!23;CL:0000107!1.35e-12!9;CL:0002321!6.17e-10!70;CL:0000220!6.17e-10!70|ontology_enrichment_celltype_v019_2=CL:0000540,1.72e-27,33;CL:0000047,1.72e-27,33;CL:0000031,1.72e-27,33;CL:0000404,1.72e-27,33;CL:0000107,2.16e-27,9;CL:0000393,7.86e-23,39;CL:0000211,7.86e-23,39;CL:0002319,1.92e-20,43;CL:0000221,6.48e-20,44;CL:0000133,6.48e-20,44;CL:0000120,4.29e-12,3;CL:0002321,1.90e-11,70;CL:0002609,2.26e-10,6;CL:0000117,1.43e-09,23;CL:0000337,1.43e-09,23;CL:0000723,3.92e-08,91;CL:0000048,3.92e-08,91;CL:0000034,1.90e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!4.57e-26!102;UBERON:0000924!4.57e-26!102;UBERON:0006601!4.57e-26!102;UBERON:0000073!9.17e-26!75;UBERON:0001016!9.17e-26!75;UBERON:0001017!4.76e-24!73;UBERON:0005743!4.76e-24!73;UBERON:0002346!2.94e-20!71;UBERON:0003075!2.94e-20!71;UBERON:0007284!2.94e-20!71;UBERON:0000010!3.25e-14!11;UBERON:0003056!4.67e-14!49;UBERON:0001049!8.25e-14!52;UBERON:0005068!8.25e-14!52;UBERON:0006241!8.25e-14!52;UBERON:0007135!8.25e-14!52;UBERON:0000033!1.24e-13!63;UBERON:0002410!1.35e-12!9;UBERON:0002020!3.49e-12!34;UBERON:0000955!3.16e-09!50;UBERON:0006238!3.16e-09!50;UBERON:0003080!5.63e-09!40;UBERON:0002616!1.29e-08!49;UBERON:0002791!1.75e-08!29;UBERON:0003528!1.75e-08!29;UBERON:0001893!1.75e-08!29;UBERON:0002780!2.74e-08!39;UBERON:0001890!2.74e-08!39;UBERON:0006240!2.74e-08!39;UBERON:0007811!1.86e-07!86;UBERON:0000970!4.71e-07!9;UBERON:0000019!4.71e-07!9;UBERON:0000047!4.71e-07!9;UBERON:0004088!4.71e-07!9;UBERON:0002104!4.71e-07!9;UBERON:0001456!4.71e-07!9;UBERON:0003072!4.71e-07!9;UBERON:0003071!4.71e-07!9;UBERON:0004128!4.71e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.16e-27,9;UBERON:0000010,3.20e-22,11;UBERON:0004121,1.12e-16,95;UBERON:0000924,1.12e-16,95;UBERON:0006601,1.12e-16,95;UBERON:0000970,1.29e-15,9;UBERON:0000019,1.29e-15,9;UBERON:0000047,1.29e-15,9;UBERON:0010312,1.29e-15,9;UBERON:0004088,1.29e-15,9;UBERON:0002104,1.29e-15,9;UBERON:0001456,1.29e-15,9;UBERON:0003072,1.29e-15,9;UBERON:0004128,1.29e-15,9;UBERON:0003071,1.29e-15,9;UBERON:0000013,4.54e-13,3;UBERON:0010313,7.86e-13,3;UBERON:0002342,7.86e-13,3;UBERON:0002005,7.86e-13,3;UBERON:0005428,7.86e-13,3;UBERON:0005062,7.86e-13,3;UBERON:0001444,1.10e-12,11;UBERON:0000020,1.39e-11,12;UBERON:0001032,1.39e-11,12;UBERON:0004456,1.39e-11,12;UBERON:0001017,7.38e-11,73;UBERON:0000033,1.19e-10,13;UBERON:0005085,1.19e-10,13;UBERON:0001016,1.72e-10,75;UBERON:0002346,1.35e-09,64;UBERON:0003075,1.35e-09,64;UBERON:0007284,1.35e-09,64;UBERON:0010371,4.24e-08,73;UBERON:0003056,7.98e-08,49|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.97010263386108,0.945041568321835,1.68259969081106,0.285650984403804,0.441737081903227,1.10241719293459,1.34183659425531,0,0,0,0,0.923204014111357,0.640413505216868,1.56274011167028,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0.745597783301202,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0,0.879580464790051,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0.130120442962704,1.37941262660084,1.44049703844279,2.26057226753573,2.58538696775046,2.69038812598185,1.68663104207512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,1.57754109708128,3.12350995437311,1.93881057959519,0.716906393857656,1.33679204449436,1.41538265394416,3.23848561339915,1.75353514746787,1.97643888973262,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,1.02440163452481,0,0.419226325255965,0,0,0.412070114477788,0,0.252697211763798,0,0,0,0.192075457214608,0,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0,0,0|short_description=p2@C130071C03Rik}} | ||
|EntrezGene=320203 | |||
|HGNC= | |||
|MCL_coexpression_id=1049 | |||
|UniProt= | |||
|association_with_transcript=-198bp_to_uc007rim.1_5end | |||
|description=CAGE_peak_2_at_C130071C03Rik_5end | |||
|id=chr13:83871972..83871975,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.86e-22!33;CL:0000047!2.86e-22!33;CL:0000031!2.86e-22!33;CL:0000404!2.86e-22!33;CL:0000221!1.46e-21!44;CL:0000133!1.46e-21!44;CL:0002319!9.49e-21!43;CL:0000393!1.76e-17!39;CL:0000211!1.76e-17!39;CL:0000055!1.84e-16!50;CL:0000117!1.02e-12!23;CL:0000337!1.02e-12!23;CL:0000107!1.35e-12!9;CL:0002321!6.17e-10!70;CL:0000220!6.17e-10!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.72e-27,33;CL:0000047,1.72e-27,33;CL:0000031,1.72e-27,33;CL:0000404,1.72e-27,33;CL:0000107,2.16e-27,9;CL:0000393,7.86e-23,39;CL:0000211,7.86e-23,39;CL:0002319,1.92e-20,43;CL:0000221,6.48e-20,44;CL:0000133,6.48e-20,44;CL:0000120,4.29e-12,3;CL:0002321,1.90e-11,70;CL:0002609,2.26e-10,6;CL:0000117,1.43e-09,23;CL:0000337,1.43e-09,23;CL:0000723,3.92e-08,91;CL:0000048,3.92e-08,91;CL:0000034,1.90e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.57e-26!102;UBERON:0000924!4.57e-26!102;UBERON:0006601!4.57e-26!102;UBERON:0000073!9.17e-26!75;UBERON:0001016!9.17e-26!75;UBERON:0001017!4.76e-24!73;UBERON:0005743!4.76e-24!73;UBERON:0002346!2.94e-20!71;UBERON:0003075!2.94e-20!71;UBERON:0007284!2.94e-20!71;UBERON:0000010!3.25e-14!11;UBERON:0003056!4.67e-14!49;UBERON:0001049!8.25e-14!52;UBERON:0005068!8.25e-14!52;UBERON:0006241!8.25e-14!52;UBERON:0007135!8.25e-14!52;UBERON:0000033!1.24e-13!63;UBERON:0002410!1.35e-12!9;UBERON:0002020!3.49e-12!34;UBERON:0000955!3.16e-09!50;UBERON:0006238!3.16e-09!50;UBERON:0003080!5.63e-09!40;UBERON:0002616!1.29e-08!49;UBERON:0002791!1.75e-08!29;UBERON:0003528!1.75e-08!29;UBERON:0001893!1.75e-08!29;UBERON:0002780!2.74e-08!39;UBERON:0001890!2.74e-08!39;UBERON:0006240!2.74e-08!39;UBERON:0007811!1.86e-07!86;UBERON:0000970!4.71e-07!9;UBERON:0000019!4.71e-07!9;UBERON:0000047!4.71e-07!9;UBERON:0004088!4.71e-07!9;UBERON:0002104!4.71e-07!9;UBERON:0001456!4.71e-07!9;UBERON:0003072!4.71e-07!9;UBERON:0003071!4.71e-07!9;UBERON:0004128!4.71e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,2.16e-27,9;UBERON:0000010,3.20e-22,11;UBERON:0004121,1.12e-16,95;UBERON:0000924,1.12e-16,95;UBERON:0006601,1.12e-16,95;UBERON:0000970,1.29e-15,9;UBERON:0000019,1.29e-15,9;UBERON:0000047,1.29e-15,9;UBERON:0010312,1.29e-15,9;UBERON:0004088,1.29e-15,9;UBERON:0002104,1.29e-15,9;UBERON:0001456,1.29e-15,9;UBERON:0003072,1.29e-15,9;UBERON:0004128,1.29e-15,9;UBERON:0003071,1.29e-15,9;UBERON:0000013,4.54e-13,3;UBERON:0010313,7.86e-13,3;UBERON:0002342,7.86e-13,3;UBERON:0002005,7.86e-13,3;UBERON:0005428,7.86e-13,3;UBERON:0005062,7.86e-13,3;UBERON:0001444,1.10e-12,11;UBERON:0000020,1.39e-11,12;UBERON:0001032,1.39e-11,12;UBERON:0004456,1.39e-11,12;UBERON:0001017,7.38e-11,73;UBERON:0000033,1.19e-10,13;UBERON:0005085,1.19e-10,13;UBERON:0001016,1.72e-10,75;UBERON:0002346,1.35e-09,64;UBERON:0003075,1.35e-09,64;UBERON:0007284,1.35e-09,64;UBERON:0010371,4.24e-08,73;UBERON:0003056,7.98e-08,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,1.41621522601718,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.97010263386108,0.945041568321835,1.68259969081106,0.285650984403804,0.441737081903227,1.10241719293459,1.34183659425531,0,0,0,0,0.923204014111357,0.640413505216868,1.56274011167028,0,0,0.15279824777681,0.294628585473668,0.284743361598206,0.745597783301202,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0,0.879580464790051,0.173824320192276,0.255715457330331,0.20778804455956,0.162241263067758,0,0,0,0,0.130120442962704,1.37941262660084,1.44049703844279,2.26057226753573,2.58538696775046,2.69038812598185,1.68663104207512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.117211686592203,0,0,1.57754109708128,3.12350995437311,1.93881057959519,0.716906393857656,1.33679204449436,1.41538265394416,3.23848561339915,1.75353514746787,1.97643888973262,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,1.02440163452481,0,0.419226325255965,0,0,0.412070114477788,0,0.252697211763798,0,0,0,0.192075457214608,0,0,0.115884325944855,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.169229215783353,0,0,0,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p2@C130071C03Rik | |||
}} |
Revision as of 01:12, 13 September 2013
Short description: | p2@C130071C03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C130071C03Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1049 |
Association with transcript: | -198bp_to_uc007rim.1_5end |
EntrezGene: | C130071C03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.72e-27 | 33 |
neuronal stem cell | 1.72e-27 | 33 |
neuroblast | 1.72e-27 | 33 |
electrically signaling cell | 1.72e-27 | 33 |
autonomic neuron | 2.16e-27 | 9 |
electrically responsive cell | 7.86e-23 | 39 |
electrically active cell | 7.86e-23 | 39 |
neural cell | 1.92e-20 | 43 |
ectodermal cell | 6.48e-20 | 44 |
neurectodermal cell | 6.48e-20 | 44 |
granule cell | 4.29e-12 | 3 |
embryonic cell | 1.90e-11 | 70 |
neuron of cerebral cortex | 2.26e-10 | 6 |
CNS neuron (sensu Vertebrata) | 1.43e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-09 | 23 |
somatic stem cell | 3.92e-08 | 91 |
multi fate stem cell | 3.92e-08 | 91 |
stem cell | 1.90e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 2.16e-27 | 9 |
peripheral nervous system | 3.20e-22 | 11 |
ectoderm-derived structure | 1.12e-16 | 95 |
ectoderm | 1.12e-16 | 95 |
presumptive ectoderm | 1.12e-16 | 95 |
eye | 1.29e-15 | 9 |
camera-type eye | 1.29e-15 | 9 |
simple eye | 1.29e-15 | 9 |
immature eye | 1.29e-15 | 9 |
ocular region | 1.29e-15 | 9 |
visual system | 1.29e-15 | 9 |
face | 1.29e-15 | 9 |
optic cup | 1.29e-15 | 9 |
optic vesicle | 1.29e-15 | 9 |
eye primordium | 1.29e-15 | 9 |
sympathetic nervous system | 4.54e-13 | 3 |
neural crest-derived structure | 7.86e-13 | 3 |
neural crest | 7.86e-13 | 3 |
enteric nervous system | 7.86e-13 | 3 |
vagal neural crest | 7.86e-13 | 3 |
neural fold | 7.86e-13 | 3 |
subdivision of head | 1.10e-12 | 11 |
sense organ | 1.39e-11 | 12 |
sensory system | 1.39e-11 | 12 |
entire sense organ system | 1.39e-11 | 12 |
central nervous system | 7.38e-11 | 73 |
head | 1.19e-10 | 13 |
ectodermal placode | 1.19e-10 | 13 |
nervous system | 1.72e-10 | 75 |
neurectoderm | 1.35e-09 | 64 |
neural plate | 1.35e-09 | 64 |
presumptive neural plate | 1.35e-09 | 64 |
ecto-epithelium | 4.24e-08 | 73 |
pre-chordal neural plate | 7.98e-08 | 49 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.