FFCP PHASE1:Hg19::chr4:106157017..106157029,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54790|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=25941|TSSclassifier=S|UniProt=Q6N021|association_with_transcript=104bp_to_AK027819_5end|coexpression_cluster_id=C13|description=CAGE_peak_7_at_TET2_5end|id=chr4:106157017..106157029,+|ontology_enrichment_celltype=CL:0002057!1.59e-23!42;CL:0000860!8.88e-23!45;CL:0002009!3.76e-21!65;CL:0000766!1.36e-20!76;CL:0002194!3.86e-20!63;CL:0000576!3.86e-20!63;CL:0000040!3.86e-20!63;CL:0000559!3.86e-20!63;CL:0000557!6.36e-20!71;CL:0000738!2.39e-19!140;CL:0000839!6.37e-19!70;CL:0002087!1.45e-18!119;CL:0002031!2.13e-17!124;CL:0000763!2.18e-17!112;CL:0000049!2.18e-17!112;CL:0002032!2.25e-17!165;CL:0000837!2.25e-17!165;CL:0000037!4.94e-17!172;CL:0000566!4.94e-17!172;CL:0000988!1.23e-14!182|ontology_enrichment_celltype_v019=CL:0000860;8.97e-65;33!CL:0002057;8.97e-65;33!CL:0000473;1.08e-47;39!CL:0000234;1.08e-47;39!CL:0000576;4.96e-30;48!CL:0000766;4.08e-21;69!CL:0000763;9.33e-14;100!CL:0000775;2.00e-10;3!CL:0002087;1.03e-09;104!CL:0000738;4.57e-09;136!CL:0000988;6.12e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,6.24e-58,42;CL:0002057,6.24e-58,42;CL:0000473,3.69e-53,48;CL:0000234,3.69e-53,48;CL:0000766,2.54e-42,72;CL:0002009,9.66e-42,61;CL:0002194,1.01e-40,59;CL:0000576,1.01e-40,59;CL:0000040,1.01e-40,59;CL:0000559,1.01e-40,59;CL:0000557,3.02e-37,67;CL:0000839,1.57e-35,66;CL:0000763,8.40e-34,108;CL:0000049,8.40e-34,108;CL:0000738,7.92e-31,136;CL:0002087,1.15e-28,115;CL:0002032,1.77e-28,161;CL:0000837,1.77e-28,161;CL:0000037,3.20e-28,168;CL:0002031,5.28e-27,120;CL:0000988,3.61e-26,177;CL:0000775,1.89e-10,3;CL:0000134,2.08e-08,354;CL:0002320,5.06e-08,361|ontology_enrichment_development_v019=CL:0002057;1.73e-42;42!CL:0000049;3.67e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.22e-18!102;UBERON:0003061!9.22e-18!102;UBERON:0002371!1.26e-16!80;UBERON:0001474!2.55e-15!86;UBERON:0002193!9.80e-15!112;UBERON:0004765!3.28e-12!101;UBERON:0001434!3.28e-12!101;UBERON:0002405!3.54e-10!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.96e-32,76;UBERON:0002390,7.78e-30,98;UBERON:0003061,7.78e-30,98;UBERON:0001474,7.19e-29,82;UBERON:0002193,3.47e-26,108;UBERON:0004765,1.53e-25,90;UBERON:0002405,1.93e-24,93;UBERON:0001434,3.93e-22,100;UBERON:0002204,7.65e-11,167;UBERON:0003081,1.94e-10,203;UBERON:0002384,4.75e-08,371|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0.261185628199839,0,0,0,0.527533956456907,0,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0.273748850145768,0,0.534893840235659,0.246301768349837,0.629686250509434,0,0,0.928896739896456,0,0,0,0,0.284338464974843,0,0,1.40381113229099,0.217010870715852,0.447830948479849,0,0.515151135268373,2.4717700592526,2.64513160582167,2.18325655069035,2.55671940596253,4.93401465626191,6.50383378879718,3.74000110018796,4.35473201099471,1.89185783910868,3.44745680736619,1.93645405075148,6.77132432971709,5.08254316765033,1.91034305040492,2.9214052977861,5.50951006267625,2.56743221660875,8.31138263538754,1.9791078011203,3.39088217956774,7.6720455095885,9.86711411337186,2.8369261234557,5.60540024096017,8.54245461872927,6.25779502104242,2.6062661364614,3.02699751316684,0.736555271975129,3.16462387440884,0.845021145247767,0.637812899895131,0.419317291016752,0.561643155732475,0.750884464207532,0.64290234678832,0.570025487482497,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,2.34894875748376,0,0,0,0,0,2.35806457649499,0.411202997999018,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0.541607727530031,0.25618263945135,1.04047478047903,0.986627427622057,0.276350017785848,0,0.296573126324121,0,0,0.226618685395132,0,0,0.253019692019503,0,1.30216690771284,0,0.150575119077773,0.127986611154418,0,0,0,0.80642697289893,1.06976078313403,1.01377082717959,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0.953962497221368,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,2.63560834872127,0,0,0,0.25326102332916,0,0.860509862246441,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0.323292113637624,0,0.302256294682921,0,0.193260853163297,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0,0.539325232640658,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0.201057944823262,0.0925884451585296,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54790 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=25941 | |||
|TSSclassifier=S | |||
|UniProt=Q6N021 | |||
|association_with_transcript=104bp_to_AK027819_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_7_at_TET2_5end | |||
|id=chr4:106157017..106157029,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.59e-23!42;CL:0000860!8.88e-23!45;CL:0002009!3.76e-21!65;CL:0000766!1.36e-20!76;CL:0002194!3.86e-20!63;CL:0000576!3.86e-20!63;CL:0000040!3.86e-20!63;CL:0000559!3.86e-20!63;CL:0000557!6.36e-20!71;CL:0000738!2.39e-19!140;CL:0000839!6.37e-19!70;CL:0002087!1.45e-18!119;CL:0002031!2.13e-17!124;CL:0000763!2.18e-17!112;CL:0000049!2.18e-17!112;CL:0002032!2.25e-17!165;CL:0000837!2.25e-17!165;CL:0000037!4.94e-17!172;CL:0000566!4.94e-17!172;CL:0000988!1.23e-14!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.97e-65;33!CL:0002057;8.97e-65;33!CL:0000473;1.08e-47;39!CL:0000234;1.08e-47;39!CL:0000576;4.96e-30;48!CL:0000766;4.08e-21;69!CL:0000763;9.33e-14;100!CL:0000775;2.00e-10;3!CL:0002087;1.03e-09;104!CL:0000738;4.57e-09;136!CL:0000988;6.12e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.24e-58,42;CL:0002057,6.24e-58,42;CL:0000473,3.69e-53,48;CL:0000234,3.69e-53,48;CL:0000766,2.54e-42,72;CL:0002009,9.66e-42,61;CL:0002194,1.01e-40,59;CL:0000576,1.01e-40,59;CL:0000040,1.01e-40,59;CL:0000559,1.01e-40,59;CL:0000557,3.02e-37,67;CL:0000839,1.57e-35,66;CL:0000763,8.40e-34,108;CL:0000049,8.40e-34,108;CL:0000738,7.92e-31,136;CL:0002087,1.15e-28,115;CL:0002032,1.77e-28,161;CL:0000837,1.77e-28,161;CL:0000037,3.20e-28,168;CL:0002031,5.28e-27,120;CL:0000988,3.61e-26,177;CL:0000775,1.89e-10,3;CL:0000134,2.08e-08,354;CL:0002320,5.06e-08,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-42;42!CL:0000049;3.67e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.22e-18!102;UBERON:0003061!9.22e-18!102;UBERON:0002371!1.26e-16!80;UBERON:0001474!2.55e-15!86;UBERON:0002193!9.80e-15!112;UBERON:0004765!3.28e-12!101;UBERON:0001434!3.28e-12!101;UBERON:0002405!3.54e-10!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.96e-32,76;UBERON:0002390,7.78e-30,98;UBERON:0003061,7.78e-30,98;UBERON:0001474,7.19e-29,82;UBERON:0002193,3.47e-26,108;UBERON:0004765,1.53e-25,90;UBERON:0002405,1.93e-24,93;UBERON:0001434,3.93e-22,100;UBERON:0002204,7.65e-11,167;UBERON:0003081,1.94e-10,203;UBERON:0002384,4.75e-08,371 | |||
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| |||
|short_description=p7@TET2 | |||
}} |
Revision as of 01:55, 13 September 2013
Short description: | p7@TET2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_TET2_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 104bp_to_AK027819_5end |
EntrezGene: | TET2 |
HGNC: | 25941 |
UniProt: | Q6N021 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.24e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.24e-58 | 42 |
defensive cell | 3.69e-53 | 48 |
phagocyte | 3.69e-53 | 48 |
myeloid leukocyte | 2.54e-42 | 72 |
macrophage dendritic cell progenitor | 9.66e-42 | 61 |
monopoietic cell | 1.01e-40 | 59 |
monocyte | 1.01e-40 | 59 |
monoblast | 1.01e-40 | 59 |
promonocyte | 1.01e-40 | 59 |
granulocyte monocyte progenitor cell | 3.02e-37 | 67 |
myeloid lineage restricted progenitor cell | 1.57e-35 | 66 |
myeloid cell | 8.40e-34 | 108 |
common myeloid progenitor | 8.40e-34 | 108 |
leukocyte | 7.92e-31 | 136 |
nongranular leukocyte | 1.15e-28 | 115 |
hematopoietic oligopotent progenitor cell | 1.77e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.77e-28 | 161 |
hematopoietic stem cell | 3.20e-28 | 168 |
hematopoietic lineage restricted progenitor cell | 5.28e-27 | 120 |
hematopoietic cell | 3.61e-26 | 177 |
neutrophil | 1.89e-10 | 3 |
mesenchymal cell | 2.08e-08 | 354 |
connective tissue cell | 5.06e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.96e-32 | 76 |
hematopoietic system | 7.78e-30 | 98 |
blood island | 7.78e-30 | 98 |
bone element | 7.19e-29 | 82 |
hemolymphoid system | 3.47e-26 | 108 |
skeletal element | 1.53e-25 | 90 |
immune system | 1.93e-24 | 93 |
skeletal system | 3.93e-22 | 100 |
musculoskeletal system | 7.65e-11 | 167 |
lateral plate mesoderm | 1.94e-10 | 203 |
connective tissue | 4.75e-08 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.