FFCP PHASE1:Mm9::chr15:57807711..57807727,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=0|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:57807711..57807727,+|id=chr15:57807711..57807727,+|ontology_enrichment_celltype=CL:0000542!1.73e-07!13;CL:0000051!1.73e-07!13;CL:0000838!8.01e-07!12|ontology_enrichment_celltype_v019_2=CL:0000838,5.95e-10,12;CL:0000542,3.31e-09,13;CL:0000051,3.31e-09,13;CL:0000624,8.10e-09,8;CL:0000213,8.81e-09,1;CL:0002078,8.81e-09,1;CL:0000115,8.81e-09,1;CL:0002262,8.81e-09,1;CL:1000398,8.81e-09,1;CL:0000815,1.24e-08,1;CL:0000792,1.24e-08,1;CL:0000945,2.44e-08,1;CL:0000236,2.44e-08,1;CL:0000826,2.44e-08,1;CL:0000791,6.74e-08,9;CL:0000789,6.74e-08,9;CL:0002420,6.74e-08,9;CL:0002419,6.74e-08,9;CL:0000790,6.74e-08,9;CL:0002031,2.96e-07,25;CL:0000738,4.26e-07,17;CL:0002087,4.26e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,8.81e-09,1;UBERON:0001281,8.81e-09,1;UBERON:0000353,8.81e-09,1;UBERON:0003497,8.81e-09,1;UBERON:0003909,8.81e-09,1;UBERON:0003928,8.81e-09,1;UBERON:0003835,8.81e-09,1;UBERON:0003513,8.81e-09,1;UBERON:0001280,8.81e-09,1;UBERON:0004647,8.81e-09,1;UBERON:0002294,8.81e-09,1;UBERON:0001173,8.81e-09,1;UBERON:0004912,8.81e-09,1;UBERON:0005171,8.81e-09,1|phase1_expression=0,0.348975407639361,0,0,1.00179145989269,0,0.233612640595526,1.42035655785734,0.563154888606667,1.17032263160997,0.34243593645101,0.319088635981346,0.856003649656029,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0,1.27316895539409,3.48677489619386,0.496454756004426,0,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,1.00669563634642,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0,2.02905142091174,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0.359445373517761,0,0.254140454146129,0.449371918214468,0,0,0,0,0.41557608911912,0.162241263067758,0,0.373220911830279,0,0,0,0.229902104433473,0.180062129805349,0,0.204109497453984,0,0.374806898238915,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0.348252166522167,0,0,0,0.772043721344145,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.439100230582101,0,0,0.205809224758569,0,0.264450566663544,0.639864751605702,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.597423819763102,0.379335801906163,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0.624075346229121,0,0.358794827043824,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,0,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0.551873492609465,0.160550589987792,0.35163505977661,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.885905678642318,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.18006109403131,0.517434735131018,0.857348140126369,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0.339956859987711,0.69975726161829,0.414599921413271,0,0.316335993581135,0,0,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0,0,31.0031116276305,0,0,0,0.516639293910924,0.337912250981556,0,0.13020438484395,0,16.4277202161684,16.1296803504405,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0,0.240390899039938,0.295379054349154,0.403865799792591,0.381034033274999,0,0.194915761479505,0.577271049841977,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0.798049746802062,0.512200817262403,0.486213434136588,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0,0,0,0,0|short_description=p@chr15:57807711..57807727,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:57807711..57807727,+ | |||
|id=chr15:57807711..57807727,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.73e-07!13;CL:0000051!1.73e-07!13;CL:0000838!8.01e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.95e-10,12;CL:0000542,3.31e-09,13;CL:0000051,3.31e-09,13;CL:0000624,8.10e-09,8;CL:0000213,8.81e-09,1;CL:0002078,8.81e-09,1;CL:0000115,8.81e-09,1;CL:0002262,8.81e-09,1;CL:1000398,8.81e-09,1;CL:0000815,1.24e-08,1;CL:0000792,1.24e-08,1;CL:0000945,2.44e-08,1;CL:0000236,2.44e-08,1;CL:0000826,2.44e-08,1;CL:0000791,6.74e-08,9;CL:0000789,6.74e-08,9;CL:0002420,6.74e-08,9;CL:0002419,6.74e-08,9;CL:0000790,6.74e-08,9;CL:0002031,2.96e-07,25;CL:0000738,4.26e-07,17;CL:0002087,4.26e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,8.81e-09,1;UBERON:0001281,8.81e-09,1;UBERON:0000353,8.81e-09,1;UBERON:0003497,8.81e-09,1;UBERON:0003909,8.81e-09,1;UBERON:0003928,8.81e-09,1;UBERON:0003835,8.81e-09,1;UBERON:0003513,8.81e-09,1;UBERON:0001280,8.81e-09,1;UBERON:0004647,8.81e-09,1;UBERON:0002294,8.81e-09,1;UBERON:0001173,8.81e-09,1;UBERON:0004912,8.81e-09,1;UBERON:0005171,8.81e-09,1 | |||
|phase1_expression=0,0.348975407639361,0,0,1.00179145989269,0,0.233612640595526,1.42035655785734,0.563154888606667,1.17032263160997,0.34243593645101,0.319088635981346,0.856003649656029,0.34968160967599,0,0.202475267389826,0,0.315462165358238,0,1.27316895539409,3.48677489619386,0.496454756004426,0,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0.61506478758457,0,0.288851619751275,0,0,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0,0.101376931219515,0,0,0.218025156380447,0,0,0,0,1.00669563634642,1.45072428402269,0.336093799142464,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0.122490799214954,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0.186399445825301,0,0,2.02905142091174,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0.517875767294343,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0.359445373517761,0,0.254140454146129,0.449371918214468,0,0,0,0,0.41557608911912,0.162241263067758,0,0.373220911830279,0,0,0,0.229902104433473,0.180062129805349,0,0.204109497453984,0,0.374806898238915,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0.348252166522167,0,0,0,0.772043721344145,0,0,0.234526059981096,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.233530684734339,0.329119699826961,0.32833492815819,0.0810688095458557,0,0.439100230582101,0,0,0.205809224758569,0,0.264450566663544,0.639864751605702,0.232236671860439,0,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0.597423819763102,0.379335801906163,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0.624075346229121,0,0.358794827043824,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0.469380496577004,0.167506257441816,0.476087281772027,0,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0.551873492609465,0.160550589987792,0.35163505977661,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.885905678642318,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.18006109403131,0.517434735131018,0.857348140126369,0,0.356737635204141,0.164549020602121,0.304464949114599,0,0,0,0,0,0.120625849856312,0.119372344003136,0,0.291480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0.339956859987711,0.69975726161829,0.414599921413271,0,0.316335993581135,0,0,0.209088296014469,0.436725127492355,0,0.0826534557253359,0,0,0,31.0031116276305,0,0,0,0.516639293910924,0.337912250981556,0,0.13020438484395,0,16.4277202161684,16.1296803504405,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0,0.240390899039938,0.295379054349154,0.403865799792591,0.381034033274999,0,0.194915761479505,0.577271049841977,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0,0.798049746802062,0.512200817262403,0.486213434136588,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0,0,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0.578719832943424,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr15:57807711..57807727,+ | |||
}} |
Revision as of 10:36, 13 September 2013
Short description: | p@chr15:57807711..57807727, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:57807711..57807727, + |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.95e-10 | 12 |
lymphocyte | 3.31e-09 | 13 |
common lymphoid progenitor | 3.31e-09 | 13 |
CD4-positive, alpha-beta T cell | 8.10e-09 | 8 |
lining cell | 8.81e-09 | 1 |
meso-epithelial cell | 8.81e-09 | 1 |
endothelial cell | 8.81e-09 | 1 |
endothelial cell of sinusoid | 8.81e-09 | 1 |
endothelial cell of hepatic sinusoid | 8.81e-09 | 1 |
regulatory T cell | 1.24e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.24e-08 | 1 |
lymphocyte of B lineage | 2.44e-08 | 1 |
B cell | 2.44e-08 | 1 |
pro-B cell | 2.44e-08 | 1 |
mature alpha-beta T cell | 6.74e-08 | 9 |
alpha-beta T cell | 6.74e-08 | 9 |
immature T cell | 6.74e-08 | 9 |
mature T cell | 6.74e-08 | 9 |
immature alpha-beta T cell | 6.74e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 2.96e-07 | 25 |
leukocyte | 4.26e-07 | 17 |
nongranular leukocyte | 4.26e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
bile duct | 8.81e-09 | 1 |
hepatic sinusoid | 8.81e-09 | 1 |
parenchyma | 8.81e-09 | 1 |
abdomen blood vessel | 8.81e-09 | 1 |
sinusoid | 8.81e-09 | 1 |
digestive system duct | 8.81e-09 | 1 |
abdominal segment blood vessel | 8.81e-09 | 1 |
trunk blood vessel | 8.81e-09 | 1 |
liver parenchyma | 8.81e-09 | 1 |
liver lobule | 8.81e-09 | 1 |
biliary system | 8.81e-09 | 1 |
biliary tree | 8.81e-09 | 1 |
biliary bud | 8.81e-09 | 1 |
hepatic duct | 8.81e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.