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FFCP PHASE1:Mm9::chr15:78075450..78075481,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=17972|HGNC=|MCL_coexpression_id=165|UniProt=P97369|association_with_transcript=209bp_to_NM_008677,uc007wow.2_5end|description=CAGE_peak_3_at_Ncf4_5end|id=chr15:78075450..78075481,+|ontology_enrichment_celltype=CL:0000049!2.23e-07!19|ontology_enrichment_celltype_v019_2=CL:0000049,8.09e-13,19;CL:0000763,4.65e-10,16;CL:0000988,1.10e-08,32;CL:0002032,1.10e-08,32;CL:0000037,1.10e-08,32;CL:0000837,1.10e-08,32;CL:0000557,5.96e-08,7;CL:0000839,2.92e-07,13;CL:0000553,5.86e-07,6;CL:0000556,5.86e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.19e-11!70;UBERON:0002193!5.61e-11!48;UBERON:0002371!9.47e-11!16;UBERON:0001474!3.47e-10!22;UBERON:0004765!3.47e-10!22;UBERON:0001434!3.47e-10!22;UBERON:0002390!1.91e-09!45;UBERON:0003061!1.91e-09!45;UBERON:0002204!1.55e-08!32;UBERON:0000926!4.18e-07!193;UBERON:0004120!4.18e-07!193;UBERON:0006603!4.18e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0001474,7.38e-17,22;UBERON:0004765,7.38e-17,22;UBERON:0001434,7.38e-17,22;UBERON:0002371,2.13e-16,16;UBERON:0002204,4.98e-14,32;UBERON:0002193,1.01e-12,48;UBERON:0002405,1.01e-12,48;UBERON:0002390,1.62e-10,45;UBERON:0003061,1.62e-10,45|phase1_expression=0,1.04692622291808,0.909998478779072,0,0,1.00727563147134,0.934450562382103,0.516493293766305,0.281577444303333,0,0,0.0797721589953364,0.684802919724823,0.34968160967599,7.99463428357591,10.9336644390506,2.79824751251259,54.5749546069751,51.966370336575,45.8340823941873,0.510259740906419,12.8085327049142,12.015190300391,9.5995453676044,11.0116454912242,0.57423196411502,1.29228598847722,1.50829862880122,0,0.252030129759931,5.09980174507201,0,0,0,0,0,0,118.025919867808,120.325643056665,102.610653818864,66.4701581475046,71.7197759206368,96.1310499001684,0,0,0,0,0,0,0,0.139986421625363,0,38.5899993932794,0,0.336093799142464,0.514518872071894,0.286533439938757,0,0,0,0,0,0,22.9474427906757,20.7661936139065,23.4458437932213,4.19440154725767,3.45796474789399,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.569486723196412,0.186399445825301,0.151452386666368,0,0.289864488701678,0,0,0,0,0,3.93244376368905,0,0,0,0,0,0,0,0,0,0,1.1418387971906,41.4300613835475,1.1875371125186,0,1.52232739156071,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0,2.16899035379867,10.6153266233985,1.45590164952668,7.28777010919299,6.78825354389311,1.86391761218122,0,0,0.766371165625774,13.539109069169,25.1959147017231,16.9003402007176,0,0,0,0.173824320192276,0,0.20778804455956,0,0.203678727700633,8.08645308965605,0,0.420883711772948,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,35.812872552975,28.5656176897334,23.017243451043,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0,0.56748166682099,0.438599962275997,1.53685080703735,0.671032093801859,0,0.102904612379284,0.660837565967596,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,1.42358718463353,0.164698954724011,0.754005626400808,1.1937388322469,0.38992817423824,2.69645822596266,1.72910439899755,0.398282546508734,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.316182685621286,0,0.31399745568275,0.370191491765402,0.296452627087149,0.83422552858047,1.17935397067922,1.57403478669398,1.82574109249653,2.41177159752417,2.03700681425136,2.87696137450811,6.80967952455149,4.66754402419738,8.62609239164127,4.09355042435354,1.5601883655728,1.26289438973556,0,0.482443521363367,5.35784251483154,0,0.162964976442026,0.339490171550376,0.938760993154008,0.335012514883631,1.19021820443007,1.36593553500459,3.94087860265477,2.87904096543407,0.797273843287435,6.22680595919804,6.73471429276993,3.18227928879325,30.1582567878545,70.7077388964322,2.95058563811422,2.48343071674259,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,1.32745138339963,0,0.302323556964751,0,0.885905678642318,0.307435147943927,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,3.16255825724996,3.09406629744561,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.938686832254841,0,0.220528398054962,0.98931751764888,0.322928853391811,0.422190474497091,0.358117032009409,0.328281799490123,1.1659233465194,0.370850604021019,14.3531539870196,5.57244543500701,6.11141940320049,11.8672127912955,17.6335553760122,18.9885883761414,4.41943917984024,6.29781535456461,5.8043988997858,0.954670618015114,0,0,0.648032044930808,0.209088296014469,0.436725127492355,0.539457385539283,0.41326727862668,0,0.648074866458964,5.59205381778233,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,0.13020438484395,0,0,0,2.21207784439725,1.62180172232131,1.43795340030758,0.909445760844565,0.537080087002444,0.39736270956253,0.480781798079875,0.147689527174577,0.908698049533329,0.533447646584999,0.806609481094724,1.36441033035653,1.05833025804362,0.116876902181569,0,0,0,0,0.965947970160952,2.43987218086537,1.28206136987086,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.564656282491984,0.169229215783353,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.949080144993393,0.492522411877817,0,0.464810523557898,0.578719832943424,0.499621155875892,0.935726433781634,0.859484216193193,0.57386499620653,2.64709702943419,1.15933917810211|short_description=p3@Ncf4}}
|EntrezGene=17972
|HGNC=
|MCL_coexpression_id=165
|UniProt=P97369
|association_with_transcript=209bp_to_NM_008677,uc007wow.2_5end
|description=CAGE_peak_3_at_Ncf4_5end
|id=chr15:78075450..78075481,+
|ontology_enrichment_celltype=CL:0000049!2.23e-07!19
|ontology_enrichment_celltype_v019_2=CL:0000049,8.09e-13,19;CL:0000763,4.65e-10,16;CL:0000988,1.10e-08,32;CL:0002032,1.10e-08,32;CL:0000037,1.10e-08,32;CL:0000837,1.10e-08,32;CL:0000557,5.96e-08,7;CL:0000839,2.92e-07,13;CL:0000553,5.86e-07,6;CL:0000556,5.86e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002405!1.19e-11!70;UBERON:0002193!5.61e-11!48;UBERON:0002371!9.47e-11!16;UBERON:0001474!3.47e-10!22;UBERON:0004765!3.47e-10!22;UBERON:0001434!3.47e-10!22;UBERON:0002390!1.91e-09!45;UBERON:0003061!1.91e-09!45;UBERON:0002204!1.55e-08!32;UBERON:0000926!4.18e-07!193;UBERON:0004120!4.18e-07!193;UBERON:0006603!4.18e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0001474,7.38e-17,22;UBERON:0004765,7.38e-17,22;UBERON:0001434,7.38e-17,22;UBERON:0002371,2.13e-16,16;UBERON:0002204,4.98e-14,32;UBERON:0002193,1.01e-12,48;UBERON:0002405,1.01e-12,48;UBERON:0002390,1.62e-10,45;UBERON:0003061,1.62e-10,45
|phase1_expression=0,1.04692622291808,0.909998478779072,0,0,1.00727563147134,0.934450562382103,0.516493293766305,0.281577444303333,0,0,0.0797721589953364,0.684802919724823,0.34968160967599,7.99463428357591,10.9336644390506,2.79824751251259,54.5749546069751,51.966370336575,45.8340823941873,0.510259740906419,12.8085327049142,12.015190300391,9.5995453676044,11.0116454912242,0.57423196411502,1.29228598847722,1.50829862880122,0,0.252030129759931,5.09980174507201,0,0,0,0,0,0,118.025919867808,120.325643056665,102.610653818864,66.4701581475046,71.7197759206368,96.1310499001684,0,0,0,0,0,0,0,0.139986421625363,0,38.5899993932794,0,0.336093799142464,0.514518872071894,0.286533439938757,0,0,0,0,0,0,22.9474427906757,20.7661936139065,23.4458437932213,4.19440154725767,3.45796474789399,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0.569486723196412,0.186399445825301,0.151452386666368,0,0.289864488701678,0,0,0,0,0,3.93244376368905,0,0,0,0,0,0,0,0,0,0,1.1418387971906,41.4300613835475,1.1875371125186,0,1.52232739156071,0.691846491768175,0.60289056221049,0.352766121407114,0.125666591329675,0,2.16899035379867,10.6153266233985,1.45590164952668,7.28777010919299,6.78825354389311,1.86391761218122,0,0,0.766371165625774,13.539109069169,25.1959147017231,16.9003402007176,0,0,0,0.173824320192276,0,0.20778804455956,0,0.203678727700633,8.08645308965605,0,0.420883711772948,0,0.229902104433473,0,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,35.812872552975,28.5656176897334,23.017243451043,0,0.234526059981096,0,0,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.16455984991348,0,0.56748166682099,0.438599962275997,1.53685080703735,0.671032093801859,0,0.102904612379284,0.660837565967596,0,0.213288250535234,0,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,1.42358718463353,0.164698954724011,0.754005626400808,1.1937388322469,0.38992817423824,2.69645822596266,1.72910439899755,0.398282546508734,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.316182685621286,0,0.31399745568275,0.370191491765402,0.296452627087149,0.83422552858047,1.17935397067922,1.57403478669398,1.82574109249653,2.41177159752417,2.03700681425136,2.87696137450811,6.80967952455149,4.66754402419738,8.62609239164127,4.09355042435354,1.5601883655728,1.26289438973556,0,0.482443521363367,5.35784251483154,0,0.162964976442026,0.339490171550376,0.938760993154008,0.335012514883631,1.19021820443007,1.36593553500459,3.94087860265477,2.87904096543407,0.797273843287435,6.22680595919804,6.73471429276993,3.18227928879325,30.1582567878545,70.7077388964322,2.95058563811422,2.48343071674259,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.659880491890142,1.32745138339963,0,0.302323556964751,0,0.885905678642318,0.307435147943927,0.258428293168221,1.09060118843252,0.356497378384721,0.316036757935816,3.16255825724996,3.09406629744561,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0.938686832254841,0,0.220528398054962,0.98931751764888,0.322928853391811,0.422190474497091,0.358117032009409,0.328281799490123,1.1659233465194,0.370850604021019,14.3531539870196,5.57244543500701,6.11141940320049,11.8672127912955,17.6335553760122,18.9885883761414,4.41943917984024,6.29781535456461,5.8043988997858,0.954670618015114,0,0,0.648032044930808,0.209088296014469,0.436725127492355,0.539457385539283,0.41326727862668,0,0.648074866458964,5.59205381778233,0,0.299033092087958,0,0.388902376688095,0.258319646955462,0.337912250981556,0.469428954583016,0.13020438484395,0,0,0,2.21207784439725,1.62180172232131,1.43795340030758,0.909445760844565,0.537080087002444,0.39736270956253,0.480781798079875,0.147689527174577,0.908698049533329,0.533447646584999,0.806609481094724,1.36441033035653,1.05833025804362,0.116876902181569,0,0,0,0,0.965947970160952,2.43987218086537,1.28206136987086,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0.320919209591815,0,0,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0.115884325944855,0,0,0.294397840268795,0,0.532427418478012,0.238436189947321,0.145346416632329,0.564656282491984,0.169229215783353,0.365855945745545,0.526139422875686,0.271608227691724,0.561142271657738,0.949080144993393,0.492522411877817,0,0.464810523557898,0.578719832943424,0.499621155875892,0.935726433781634,0.859484216193193,0.57386499620653,2.64709702943419,1.15933917810211
|short_description=p3@Ncf4
}}

Revision as of 11:04, 13 September 2013

Short description:p3@Ncf4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ncf4_5end
Coexpression cluster:MCL_coexpression_mm9:165
Association with transcript: 209bp_to_NM_008677, uc007wow.2_5end
EntrezGene:Ncf4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ncf4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.35
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.93
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A254.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A451.97
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A645.83
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.02
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D19.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D211.01
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8118.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1120.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3102.61
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G966.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H271.72
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H496.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A238.59
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E720.77
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D223.45
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H941.43
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H12.17
bone (os femoris), adult.CNhs10483.56-12G210.62
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D125.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.90
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.09
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C835.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D228.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D523.02
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F46.81
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H24.09
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B15.36
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E53.94
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A46.23
lung, neonate N25.CNhs11119.1359-25C76.73
lung, neonate N30.CNhs11133.1394-42H23.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A130.16
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A170.71
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.99
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G214.35
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F26.11
spleen, neonate N10.CNhs11116.752-24D111.87
spleen, neonate N20.CNhs11112.824-19H117.63
spleen, neonate N25.CNhs11099.1354-25G318.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.80
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
bone element7.38e-1722
skeletal element7.38e-1722
skeletal system7.38e-1722
bone marrow2.13e-1616
musculoskeletal system4.98e-1432
hemolymphoid system1.01e-1248
immune system1.01e-1248
hematopoietic system1.62e-1045
blood island1.62e-1045







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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