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FFCP PHASE1:Mm9::chr15:80541722..80541770,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=213988|HGNC=|MCL_coexpression_id=123|UniProt=Q8BKI2,Q8BWL0,Q8BX83,Q8VD67|association_with_transcript=0bp_to_NM_144812,uc007wvt.1_5end|description=CAGE_peak_1_at_Tnrc6b_5end|id=chr15:80541722..80541770,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!5.84e-11!42;UBERON:0000065!1.05e-10!41;UBERON:0004177!2.34e-10!29;UBERON:0006562!2.53e-10!24;UBERON:0001557!2.53e-10!24;UBERON:0001042!2.53e-10!24;UBERON:0008814!2.53e-10!24;UBERON:0009145!2.53e-10!24;UBERON:0003408!2.88e-10!24;UBERON:0002370!4.83e-10!23;UBERON:0000974!4.83e-10!23;UBERON:0004807!4.83e-10!23;UBERON:0005058!4.83e-10!23;UBERON:0003351!4.83e-10!23;UBERON:0009113!4.83e-10!23;UBERON:0003295!4.83e-10!23;UBERON:0009722!4.83e-10!23;UBERON:0005562!4.83e-10!23;UBERON:0007690!4.83e-10!23;UBERON:0000072!1.32e-08!27;UBERON:0003104!2.01e-08!131;UBERON:0009142!2.01e-08!131;UBERON:0002390!8.81e-08!45;UBERON:0003061!8.81e-08!45;UBERON:0005057!1.14e-07!51;UBERON:0002193!2.85e-07!48;UBERON:0000926!3.30e-07!193;UBERON:0004120!3.30e-07!193;UBERON:0006603!3.30e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0001004,5.83e-11,42;UBERON:0000065,1.05e-10,41;UBERON:0004177,2.34e-10,29;UBERON:0005057,2.34e-10,29;UBERON:0006562,2.52e-10,24;UBERON:0001557,2.52e-10,24;UBERON:0001042,2.52e-10,24;UBERON:0008814,2.52e-10,24;UBERON:0009145,2.52e-10,24;UBERON:0003408,2.87e-10,24;UBERON:0002370,4.81e-10,23;UBERON:0000974,4.81e-10,23;UBERON:0004807,4.81e-10,23;UBERON:0005058,4.81e-10,23;UBERON:0003351,4.81e-10,23;UBERON:0009113,4.81e-10,23;UBERON:0003295,4.81e-10,23;UBERON:0009722,4.81e-10,23;UBERON:0005562,4.81e-10,23;UBERON:0007690,4.81e-10,23;UBERON:0007811,1.85e-09,36;UBERON:0000077,2.20e-09,35;UBERON:0000072,1.32e-08,27;UBERON:0001041,5.24e-08,80;UBERON:0002390,9.07e-08,45;UBERON:0003061,9.07e-08,45;UBERON:0002193,2.93e-07,48;UBERON:0002405,2.93e-07,48|phase1_expression=9.28863313207805,2.44282785347553,3.18499467572675,1.20985684522732,6.01074875935617,2.68606835059024,2.33612640595526,37.3166404746155,19.5696323790817,20.1295492636914,5.30775701499065,3.66951931378547,32.6993394168603,38.9020790764538,6.99530499812892,12.3509913107794,11.1929900500503,23.5019313191887,27.834230021965,24.6145998042858,8.67441559540912,9.03547655928056,5.22399578277871,2.87986361028132,2.06468352960453,0.57423196411502,2.58457197695445,2.80112602491656,1.71021077510736,3.52842181663903,1.33038306393183,1.90509202037889,0.61506478758457,0,4.62162591602039,0.997407872150954,3.26670970019791,17.996860121687,11.720030167857,15.1821885752402,18.8234076169925,30.7370468231301,15.0508209439658,9.06457089424156,8.51566222243922,7.15832333430558,3.12956537739216,0.872100625521786,1.5378032791413,1.74986909166855,2.93971485413261,0,20.6372605451016,35.5427449585559,51.0862574696545,1.80081605225163,3.43840127926508,0.515672092277442,2.02316460859598,0,0,2.37191172448392,0,0.449949858640699,0.988866362566974,1.4209602298922,2.09720077362883,2.68952813725088,2.28117147078651,2.8351247049655,2.3135745748652,1.99955689082663,3.97563373712904,1.71487118900936,2.68367318851062,2.75765635983006,11.0115880999389,6.38436690425939,8.60196586234964,0.923204014111357,1.37231465403614,1.04182674111352,4.4669279840221,5.6276261003168,5.80633341551878,2.65165726926301,2.42031857358475,1.3047961207771,1.96888102666279,3.77857800533928,12.7540375028738,12.0459342777394,3.39985666853875,5.39703191637817,18.8435161059824,14.7848872742121,7.02222100658759,6.81721290312231,5.45550609666024,6.36011234118612,4.92951969218382,19.2489716121477,71.3454671178608,35.5533351576666,2.59789249213457,3.04031838570118,5.05524445014783,12.6744106488157,32.3672354558965,4.30482203287992,1.56136794089522,3.04465478312141,4.61230994512117,3.61734337326294,9.52468527799209,2.51333182659351,5.19109432242185,5.63937491987655,7.07688441559899,6.63244084784378,10.3795513676385,7.27312879702833,1.86391761218122,4.09893115816166,8.16842156572475,3.83185582812887,8.98613433794402,6.59893004092748,8.76784566804146,4.6435098215495,3.20250421973039,2.1361239859187,3.47648640384553,6.90431734791892,4.77912502486988,5.02947915510049,6.92507674182151,10.9478134136882,4.54900965180614,6.52369753248069,3.90361328888111,1.37941262660084,2.88099407688559,3.91832526372859,11.2260223599691,8.71173297936978,8.80796210861451,10.6068382002996,1.5089759505299,2.45837904218165,4.39877810409872,1.7535658594206,4.17070873838397,2.78601733217733,5.14455341019859,5.57295947091781,2.80885274925294,4.63226232806487,6.53576048609863,1.65700618028402,3.28336483973535,2.52086886045421,2.60419209143731,3.14822770795846,4.47374627373397,3.72054311600653,4.02410102099429,7.00592054203017,2.63295759861569,3.447516745661,7.53939928776458,8.47959927066927,3.95190207523891,11.9443712696731,5.46753866266731,3.39585220851639,3.63460661282178,2.90895623329899,2.98603550749328,1.85789337488351,3.09281907173024,3.22693639397348,3.1132926138281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|EntrezGene=213988
|HGNC=
|MCL_coexpression_id=123
|UniProt=Q8BKI2,Q8BWL0,Q8BX83,Q8VD67
|association_with_transcript=0bp_to_NM_144812,uc007wvt.1_5end
|description=CAGE_peak_1_at_Tnrc6b_5end
|id=chr15:80541722..80541770,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!5.84e-11!42;UBERON:0000065!1.05e-10!41;UBERON:0004177!2.34e-10!29;UBERON:0006562!2.53e-10!24;UBERON:0001557!2.53e-10!24;UBERON:0001042!2.53e-10!24;UBERON:0008814!2.53e-10!24;UBERON:0009145!2.53e-10!24;UBERON:0003408!2.88e-10!24;UBERON:0002370!4.83e-10!23;UBERON:0000974!4.83e-10!23;UBERON:0004807!4.83e-10!23;UBERON:0005058!4.83e-10!23;UBERON:0003351!4.83e-10!23;UBERON:0009113!4.83e-10!23;UBERON:0003295!4.83e-10!23;UBERON:0009722!4.83e-10!23;UBERON:0005562!4.83e-10!23;UBERON:0007690!4.83e-10!23;UBERON:0000072!1.32e-08!27;UBERON:0003104!2.01e-08!131;UBERON:0009142!2.01e-08!131;UBERON:0002390!8.81e-08!45;UBERON:0003061!8.81e-08!45;UBERON:0005057!1.14e-07!51;UBERON:0002193!2.85e-07!48;UBERON:0000926!3.30e-07!193;UBERON:0004120!3.30e-07!193;UBERON:0006603!3.30e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0001004,5.83e-11,42;UBERON:0000065,1.05e-10,41;UBERON:0004177,2.34e-10,29;UBERON:0005057,2.34e-10,29;UBERON:0006562,2.52e-10,24;UBERON:0001557,2.52e-10,24;UBERON:0001042,2.52e-10,24;UBERON:0008814,2.52e-10,24;UBERON:0009145,2.52e-10,24;UBERON:0003408,2.87e-10,24;UBERON:0002370,4.81e-10,23;UBERON:0000974,4.81e-10,23;UBERON:0004807,4.81e-10,23;UBERON:0005058,4.81e-10,23;UBERON:0003351,4.81e-10,23;UBERON:0009113,4.81e-10,23;UBERON:0003295,4.81e-10,23;UBERON:0009722,4.81e-10,23;UBERON:0005562,4.81e-10,23;UBERON:0007690,4.81e-10,23;UBERON:0007811,1.85e-09,36;UBERON:0000077,2.20e-09,35;UBERON:0000072,1.32e-08,27;UBERON:0001041,5.24e-08,80;UBERON:0002390,9.07e-08,45;UBERON:0003061,9.07e-08,45;UBERON:0002193,2.93e-07,48;UBERON:0002405,2.93e-07,48
|phase1_expression=9.28863313207805,2.44282785347553,3.18499467572675,1.20985684522732,6.01074875935617,2.68606835059024,2.33612640595526,37.3166404746155,19.5696323790817,20.1295492636914,5.30775701499065,3.66951931378547,32.6993394168603,38.9020790764538,6.99530499812892,12.3509913107794,11.1929900500503,23.5019313191887,27.834230021965,24.6145998042858,8.67441559540912,9.03547655928056,5.22399578277871,2.87986361028132,2.06468352960453,0.57423196411502,2.58457197695445,2.80112602491656,1.71021077510736,3.52842181663903,1.33038306393183,1.90509202037889,0.61506478758457,0,4.62162591602039,0.997407872150954,3.26670970019791,17.996860121687,11.720030167857,15.1821885752402,18.8234076169925,30.7370468231301,15.0508209439658,9.06457089424156,8.51566222243922,7.15832333430558,3.12956537739216,0.872100625521786,1.5378032791413,1.74986909166855,2.93971485413261,0,20.6372605451016,35.5427449585559,51.0862574696545,1.80081605225163,3.43840127926508,0.515672092277442,2.02316460859598,0,0,2.37191172448392,0,0.449949858640699,0.988866362566974,1.4209602298922,2.09720077362883,2.68952813725088,2.28117147078651,2.8351247049655,2.3135745748652,1.99955689082663,3.97563373712904,1.71487118900936,2.68367318851062,2.75765635983006,11.0115880999389,6.38436690425939,8.60196586234964,0.923204014111357,1.37231465403614,1.04182674111352,4.4669279840221,5.6276261003168,5.80633341551878,2.65165726926301,2.42031857358475,1.3047961207771,1.96888102666279,3.77857800533928,12.7540375028738,12.0459342777394,3.39985666853875,5.39703191637817,18.8435161059824,14.7848872742121,7.02222100658759,6.81721290312231,5.45550609666024,6.36011234118612,4.92951969218382,19.2489716121477,71.3454671178608,35.5533351576666,2.59789249213457,3.04031838570118,5.05524445014783,12.6744106488157,32.3672354558965,4.30482203287992,1.56136794089522,3.04465478312141,4.61230994512117,3.61734337326294,9.52468527799209,2.51333182659351,5.19109432242185,5.63937491987655,7.07688441559899,6.63244084784378,10.3795513676385,7.27312879702833,1.86391761218122,4.09893115816166,8.16842156572475,3.83185582812887,8.98613433794402,6.59893004092748,8.76784566804146,4.6435098215495,3.20250421973039,2.1361239859187,3.47648640384553,6.90431734791892,4.77912502486988,5.02947915510049,6.92507674182151,10.9478134136882,4.54900965180614,6.52369753248069,3.90361328888111,1.37941262660084,2.88099407688559,3.91832526372859,11.2260223599691,8.71173297936978,8.80796210861451,10.6068382002996,1.5089759505299,2.45837904218165,4.39877810409872,1.7535658594206,4.17070873838397,2.78601733217733,5.14455341019859,5.57295947091781,2.80885274925294,4.63226232806487,6.53576048609863,1.65700618028402,3.28336483973535,2.52086886045421,2.60419209143731,3.14822770795846,4.47374627373397,3.72054311600653,4.02410102099429,7.00592054203017,2.63295759861569,3.447516745661,7.53939928776458,8.47959927066927,3.95190207523891,11.9443712696731,5.46753866266731,3.39585220851639,3.63460661282178,2.90895623329899,2.98603550749328,1.85789337488351,3.09281907173024,3.22693639397348,3.11329261382818,2.28270751335071,3.32170343081158,2.9645811850322,4.27269854960458,4.77495532898762,4.874102177978,6.29173586057955,3.45820879799511,6.37252074413975,0.948339504765408,5.25543158004753,4.50830942692322,5.09128319613286,4.65485969202302,10.8009162631091,6.19718063817721,7.38050739898011,7.37894020854462,5.42947521255922,2.96452627087149,1.83529616287703,0.786235980452812,2.02375901146368,2.23146133527353,3.85883455603867,4.07401362850272,3.74004978686054,16.5377931310536,3.84385978463314,7.18841032636773,9.30352369171258,4.05648975048929,3.78868316920668,5.9201146462231,13.0259750768109,13.1174765018289,3.03186258832776,2.28150967018836,5.09235257325564,5.16318546234705,9.04533790185805,9.52174563544055,12.6836871107569,11.5073655197519,8.63712289630222,11.6401981119966,10.651115456523,11.0518388394173,14.1756077409881,4.52373851817817,4.35124547054968,1.96705709207614,3.31124095565679,3.21101179975584,6.32943107597897,3.77050374366353,16.4106102682842,1.57754109708128,2.34263246577983,2.36965737506079,2.62865677747807,4.23317480756549,3.11384183867716,5.66734982344852,3.79932615284705,3.55759000151871,7.71171159412337,6.38730383437209,3.38324646967785,9.93610452056814,6.26886467295635,6.63725691699814,1.94224508923985,1.51161778482376,3.77210159511796,2.65771703592696,2.15204603560749,5.94385074286909,4.36240475373007,4.9909632973861,5.05658812697306,11.5960469432499,4.12542172992747,10.2131881726136,3.24109969256358,2.32845630808958,4.28674070063185,4.96552654198366,8.20496560969525,6.2528627828806,4.26250928760439,2.11204537257339,1.90648863777438,9.48272111636336,10.8824926941377,12.1098320021929,4.46315644468353,4.8942661041286,2.46211349617592,3.78925087618806,3.70850604021019,7.51831875510552,4.54051109519089,3.33350149265481,9.60679130723924,9.15851325730869,13.2691340459783,16.8278645693917,16.2343684695443,16.1693969351176,0.954670618015114,2.05618395827738,3.25311147402958,3.56417624711944,3.3454127362315,3.27543845619266,4.98998081623837,8.92657321833628,5.75863072364865,6.48074866458964,8.69875038321696,2.25477175473676,4.63501292736334,2.97825282822776,5.05573089694524,4.39143399824286,4.22390313726945,7.51086327332825,6.11960608766566,13.421996086491,9.18019659138823,8.06484017522023,29.0730230977924,2.43270258348197,4.31386020092274,8.83461596249006,12.8899220880587,19.6694541233452,26.2026079953532,23.3349452935832,33.7227942826813,35.5885787078849,37.5073408709047,41.6145150758743,49.5490984447697,61.2434967431421,9.06921534460846,0.887943813496259,0.62799699626633,0.671538465456314,11.9777548299958,3.56596703357246,5.67770035228522,3.85863082342319,4.51414893631827,3.95326289831947,2.76195141904306,0.572895513439397,4.64003592327956,2.05524755931193,4.5323633843382,4.72515750162264,3.15224842256954,1.81256963593682,2.5888015587591,1.14166082342594,5.1873233542134,2.73173769206615,3.16038732188782,2.93458427679175,3.12533964365024,4.88942801163553,4.53277125925567,4.49286893428541,3.28506375292937,6.08350319736575,5.09291121742406,7.49132059759059,7.55496798377458,5.97328877138378,9.0495801343784,5.67833197129792,6.75182271622968,5.76920261124629,5.2991611248383,5.82877729055206,6.21165321557681,5.96090474868302,4.36039249896986,6.11710972699649,6.43071019976741,3.65855945745545,5.78753365163254,5.70377278152619,4.48913817326191,4.38949567059444,6.10727790728493,2.45538625901814,5.57772628269478,4.43685205256625,1.74867404556562,7.48581147025307,7.95022899978704,6.88637995447836,5.07360263974886,4.63735671240843
|short_description=p1@Tnrc6b
}}

Revision as of 11:15, 13 September 2013

Short description:p1@Tnrc6b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tnrc6b_5end
Coexpression cluster:MCL_coexpression_mm9:123
Association with transcript: 0bp_to_NM_144812, uc007wvt.1_5end
EntrezGene:Tnrc6b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tnrc6b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G79.29
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E937.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E719.57
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F220.13
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.67
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E432.70
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E838.90
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.35
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.19
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.50
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A427.83
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H29.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.06
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I12.58
GP2+ M cell, pool3.CNhs13240.11847-124I22.80
Ileum epithelium, pool1.CNhs13199.10252-104B91.71
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G818.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H111.72
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H230.74
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.16
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.87
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.64
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I935.54
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A151.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.28
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D311.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F93.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G312.75
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F712.05
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F418.84
Mouse hepatocyte, donor8.CNhs13091.11824-124F614.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.93
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I871.35
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.67
accessory axillary lymph node, adult.CNhs10475.1063-29H932.37
adrenal gland, adult.CNhs10508.49-24D74.30
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D63.04
adrenal gland, embryo E17.CNhs11043.1263-45I14.61
adrenal gland, embryo E18.CNhs11026.1262-18F53.62
adrenal gland, neonate N00.CNhs11191.1311-23C19.52
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A85.19
aorta, adult.CNhs10498.46-23H15.64
bone (os femoris), adult.CNhs10483.56-12G27.08
bone (os femoris), neonate N02.CNhs11227.1985-43F56.63
bone (os femoris), neonate N16.CNhs11225.1525-43A610.38
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I28.17
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.77
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F26.90
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.95
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C611.23
eyeball, neonate N01.CNhs11140.1532-43E78.71
eyeball, neonate N02.CNhs11205.1551-44G88.81
eyeball, neonate N16.CNhs11188.777-19A210.61
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.63
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.52
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C64.47
heart, embryo E17.CNhs11025.479-18E53.72
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E37.01
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G13.45
heart, neonate N16.CNhs11209.782-15G17.54
heart, neonate N20.CNhs11127.821-26I68.48
heart, neonate N25.CNhs11196.1351-25D33.95
heart, neonate N30.CNhs11202.1390-42D211.94
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G13.40
intestinal mucosa, adult.CNhs10506.860-29I33.63
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D33.11
intestine, embryo E18.CNhs10526.1289-20F72.28
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E92.96
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F24.77
intestine, neonate N10.CNhs11098.755-23A54.87
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E33.46
intestine, neonate N30.CNhs11131.1384-42G16.37
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F85.26
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G710.80
kidney, neonate N10.CNhs11206.758-6D56.20
kidney, neonate N20.CNhs11113.832-19I17.38
kidney, neonate N25.CNhs11122.1353-25F37.38
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F81.84
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D72.23
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A34.07
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F416.54
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H29.30
liver, neonate N10.CNhs11115.751-24B94.06
liver, neonate N20.CNhs11220.823-25A33.79
liver, neonate N25.CNhs11198.1368-26H15.92
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B113.12
lung, embryo E12.CNhs10522.354-16G23.03
lung, embryo E14.CNhs10604.404-26F82.28
lung, embryo E15.CNhs11020.432-17C55.09
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A69.05
lung, embryo E18.CNhs10583.1287-20I69.52
lung, neonate N00.CNhs11224.640-42C612.68
lung, neonate N06.CNhs11212.683-20E511.51
lung, neonate N07.CNhs11111.715-19A38.64
lung, neonate N10.CNhs11219.750-23E611.64
lung, neonate N20.CNhs11109.822-18A410.65
lung, neonate N25.CNhs11119.1359-25C711.05
lung, neonate N30.CNhs11133.1394-42H214.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A36.33
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.41
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.11
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I97.71
ovary, adult.CNhs10507.91-2I76.39
ovary, embryo E18.CNhs11040.505-44H73.38
ovary, neonate N00.CNhs11217.1299-22I49.94
oviduct, adult pregnant day01.CNhs10500.988-6G66.27
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G32.66
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G95.94
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F68.20
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F89.48
skin, adult.CNhs10492.30-1C310.88
skin, neonate N00.CNhs11124.650-25G412.11
skin, neonate N03.CNhs11215.662-22H34.46
skin, neonate N06.CNhs11097.693-20I54.89
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G27.52
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D19.61
spleen, neonate N20.CNhs11112.824-19H19.16
spleen, neonate N25.CNhs11099.1354-25G313.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.17
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E32.06
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D43.56
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C63.28
stomach, neonate N03.CNhs11193.1340-24B84.99
stomach, neonate N07.CNhs11210.718-18A98.93
stomach, neonate N25.CNhs11104.1355-25E45.76
stomach, neonate N30.CNhs11134.1386-42I16.48
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F54.64
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B77.51
testis, neonate N07.CNhs11222.726-26I46.12
testis, neonate N10.CNhs11204.763-44D913.42
testis, neonate N20.CNhs11110.839-18H39.18
testis, neonate N30.CNhs11130.1391-42E28.06
thymus, adult.CNhs10471.38-12B529.07
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C58.83
thymus, embryo E17.CNhs10581.478-18C112.89
thymus, embryo E18.CNhs10595.1273-19G419.67
thymus, neonate N02.CNhs11181.1541-43F826.20
thymus, neonate N03.CNhs11137.2104-43C723.33
thymus, neonate N06.CNhs11197.681-26C433.72
thymus, neonate N07.CNhs11211.713-19D335.59
thymus, neonate N10.CNhs11194.748-24E437.51
thymus, neonate N20.CNhs11186.820-7A241.61
thymus, neonate N25.CNhs11125.1362-25G749.55
thymus, neonate N30.CNhs11132.1393-42G261.24
tongue, adult.CNhs10499.32-1B49.07
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.89
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E411.98
uterus, adult pregnant day19.CNhs10497.590-15F53.57
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D53.86
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H22.73
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.08
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G55.68
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.75
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.21
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.96
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.36
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.12
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.58
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C27.95
whole body, neonate N01.CNhs10576.659-23C66.89
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
respiratory system5.83e-1142
respiratory tract1.05e-1041
hemopoietic organ2.34e-1029
immune organ2.34e-1029
pharynx2.52e-1024
upper respiratory tract2.52e-1024
chordate pharynx2.52e-1024
pharyngeal arch system2.52e-1024
pharyngeal region of foregut2.52e-1024
gland of gut2.87e-1024
thymus4.81e-1023
neck4.81e-1023
respiratory system epithelium4.81e-1023
hemolymphoid system gland4.81e-1023
pharyngeal epithelium4.81e-1023
thymic region4.81e-1023
pharyngeal gland4.81e-1023
entire pharyngeal arch endoderm4.81e-1023
thymus primordium4.81e-1023
early pharyngeal endoderm4.81e-1023
craniocervical region1.85e-0936
mixed endoderm/mesoderm-derived structure2.20e-0935
segment of respiratory tract1.32e-0827
foregut5.24e-0880
hematopoietic system9.07e-0845
blood island9.07e-0845
hemolymphoid system2.93e-0748
immune system2.93e-0748







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