FFCP PHASE1:Mm9::chr17:54436510..54436520,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=218|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:54436510..54436520,-|id=chr17:54436510..54436520,-|ontology_enrichment_celltype=CL:0000540!1.86e-07!33;CL:0000047!1.86e-07!33;CL:0000031!1.86e-07!33;CL:0000404!1.86e-07!33;CL:0000117!3.00e-07!23;CL:0000337!3.00e-07!23;CL:0002611!4.31e-07!2|ontology_enrichment_celltype_v019_2=CL:0002614,1.59e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002240!7.46e-13!6;UBERON:0005174!7.46e-13!6;UBERON:0001137!7.46e-13!6;UBERON:0001017!2.06e-12!73;UBERON:0005743!2.06e-12!73;UBERON:0003076!4.22e-12!12;UBERON:0003057!4.22e-12!12;UBERON:0000073!5.76e-12!75;UBERON:0001016!5.76e-12!75;UBERON:0001948!5.77e-10!5;UBERON:0002315!5.77e-10!5;UBERON:0001049!5.77e-10!52;UBERON:0005068!5.77e-10!52;UBERON:0006241!5.77e-10!52;UBERON:0007135!5.77e-10!52;UBERON:0004121!9.95e-09!102;UBERON:0000924!9.95e-09!102;UBERON:0006601!9.95e-09!102;UBERON:0002298!1.29e-08!6;UBERON:0001896!1.31e-07!2;UBERON:0005290!1.31e-07!2;UBERON:0010096!1.31e-07!2;UBERON:0002346!1.44e-07!71;UBERON:0003075!1.44e-07!71;UBERON:0007284!1.44e-07!71;UBERON:0002256!4.31e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001896,7.52e-44,2;UBERON:0002298,7.52e-44,2;UBERON:0005290,7.52e-44,2;UBERON:0010096,7.52e-44,2;UBERON:0003076,3.40e-17,12;UBERON:0003057,3.40e-17,12;UBERON:0004733,1.87e-15,6;UBERON:0004732,1.87e-15,6;UBERON:0002028,1.87e-15,6;UBERON:0007277,1.87e-15,6;UBERON:0002038,1.59e-08,3;UBERON:0009663,1.59e-08,3;UBERON:0009661,1.59e-08,3;UBERON:0000125,1.59e-08,3;UBERON:0002308,1.59e-08,3;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,1.67509799400829,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.17211686592203,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:54436510..54436520,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=218 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:54436510..54436520,- | |||
|id=chr17:54436510..54436520,- | |||
|ontology_enrichment_celltype=CL:0000540!1.86e-07!33;CL:0000047!1.86e-07!33;CL:0000031!1.86e-07!33;CL:0000404!1.86e-07!33;CL:0000117!3.00e-07!23;CL:0000337!3.00e-07!23;CL:0002611!4.31e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.59e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!7.46e-13!6;UBERON:0005174!7.46e-13!6;UBERON:0001137!7.46e-13!6;UBERON:0001017!2.06e-12!73;UBERON:0005743!2.06e-12!73;UBERON:0003076!4.22e-12!12;UBERON:0003057!4.22e-12!12;UBERON:0000073!5.76e-12!75;UBERON:0001016!5.76e-12!75;UBERON:0001948!5.77e-10!5;UBERON:0002315!5.77e-10!5;UBERON:0001049!5.77e-10!52;UBERON:0005068!5.77e-10!52;UBERON:0006241!5.77e-10!52;UBERON:0007135!5.77e-10!52;UBERON:0004121!9.95e-09!102;UBERON:0000924!9.95e-09!102;UBERON:0006601!9.95e-09!102;UBERON:0002298!1.29e-08!6;UBERON:0001896!1.31e-07!2;UBERON:0005290!1.31e-07!2;UBERON:0010096!1.31e-07!2;UBERON:0002346!1.44e-07!71;UBERON:0003075!1.44e-07!71;UBERON:0007284!1.44e-07!71;UBERON:0002256!4.31e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,7.52e-44,2;UBERON:0002298,7.52e-44,2;UBERON:0005290,7.52e-44,2;UBERON:0010096,7.52e-44,2;UBERON:0003076,3.40e-17,12;UBERON:0003057,3.40e-17,12;UBERON:0004733,1.87e-15,6;UBERON:0004732,1.87e-15,6;UBERON:0002028,1.87e-15,6;UBERON:0007277,1.87e-15,6;UBERON:0002038,1.59e-08,3;UBERON:0009663,1.59e-08,3;UBERON:0009661,1.59e-08,3;UBERON:0000125,1.59e-08,3;UBERON:0002308,1.59e-08,3;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.856952953211411,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,1.67509799400829,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0,0,0.41557608911912,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76605648986571,1.17211686592203,0,0,0,0,0,0,0.445597348164788,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,3.70850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0,0,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:54436510..54436520,- | |||
}} |
Revision as of 14:56, 13 September 2013
Short description: | p@chr17:54436510..54436520, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:54436510..54436520, - |
Coexpression cluster: | MCL_coexpression_mm9:218 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.59e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 7.52e-44 | 2 |
brainstem | 7.52e-44 | 2 |
myelencephalon | 7.52e-44 | 2 |
future myelencephalon | 7.52e-44 | 2 |
posterior neural tube | 3.40e-17 | 12 |
chordal neural plate | 3.40e-17 | 12 |
segmental subdivision of hindbrain | 1.87e-15 | 6 |
segmental subdivision of nervous system | 1.87e-15 | 6 |
hindbrain | 1.87e-15 | 6 |
presumptive hindbrain | 1.87e-15 | 6 |
substantia nigra | 1.59e-08 | 3 |
telencephalic nucleus | 1.59e-08 | 3 |
midbrain nucleus | 1.59e-08 | 3 |
neural nucleus | 1.59e-08 | 3 |
nucleus of brain | 1.59e-08 | 3 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.