FFCP PHASE1:Hg19::chr5:5140200..5140232,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-33bp_to_ENST00000512155_5end|coexpression_cluster_id=C2822|description=CAGE_peak_1_at_ENST00000512155_5end|id=chr5:5140200..5140232,-|ontology_enrichment_celltype=CL:0002322!6.18e-18!5;CL:0000128!1.17e-16!7;CL:0000126!1.17e-16!7;CL:0000127!1.17e-16!7;CL:0002453!1.17e-16!7;CL:0002319!9.63e-13!25;CL:0000133!1.45e-11!59;CL:0002605!2.32e-11!3;CL:0000047!1.51e-10!8;CL:0000064!6.23e-10!3;CL:0005012!6.23e-10!3;CL:0000067!6.23e-10!3;CL:0002304!6.23e-10!3;CL:0000221!5.43e-09!71|ontology_enrichment_celltype_v019=CL:0002322;2.42e-66;5!CL:0002605;7.97e-40;3!CL:0002321;8.67e-32;15!CL:0000128;1.69e-17;7!CL:0000126;1.69e-17;7!CL:0000127;1.69e-17;7!CL:0000222;5.42e-15;1!CL:0000148;1.52e-12;10!CL:0000147;4.01e-09;14!CL:0002319;4.66e-08;25!CL:0000047;6.80e-08;2!CL:0000243;1.52e-07;15!CL:0000125;1.52e-07;15!CL:0000095;8.37e-07;17|ontology_enrichment_celltype_v019_2=CL:0002322,2.12e-66,5;CL:0002605,3.35e-40,3;CL:0000128,1.17e-17,7;CL:0000126,1.17e-17,7;CL:0000127,1.17e-17,7;CL:0002453,1.17e-17,7;CL:0000148,1.44e-12,10;CL:0000541,1.44e-12,10;CL:0000333,8.08e-11,41;CL:0000133,4.17e-10,59;CL:0000147,3.85e-09,14;CL:0000221,3.14e-08,72;CL:0002319,4.09e-08,25;CL:0000243,1.31e-07,15;CL:0000125,1.31e-07,15;CL:0000030,1.31e-07,15;CL:0000339,1.31e-07,15;CL:0000095,7.34e-07,17;CL:0000123,7.34e-07,17|ontology_enrichment_development_v019=UBERON:0006215;1.77e-18;3!CL:0000133;1.81e-08;59!CL:0000339;1.52e-07;15|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001778!6.23e-10!3;UBERON:0001775!6.23e-10!3;UBERON:0002037!3.66e-09!6;UBERON:0006215!3.66e-09!6;UBERON:0001017!3.71e-09!82;UBERON:0002680!6.31e-09!9;UBERON:0001895!6.31e-09!9;UBERON:0010092!6.31e-09!9;UBERON:0005743!1.53e-08!86;UBERON:0000488!1.50e-07!4;UBERON:0000073!2.39e-07!94;UBERON:0001016!2.39e-07!94|ontology_enrichment_uberon_v019=UBERON:0002037;1.01e-09;6!UBERON:0002680;9.10e-07;9!UBERON:0001895;9.10e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.06e-09,6;UBERON:0006215,1.06e-09,6;UBERON:0002680,9.37e-07,9;UBERON:0001895,9.37e-07,9;UBERON:0010092,9.37e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,1.71741592278634,1.50561867580173,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78118489001746,2.65059536642971,2.67246068599892,1.45125477021519,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10579259931225,1.47773809476774,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.803765742325096,0.687697182986169,0,0,0,0.0607495566580247,0,0,3.04236611182989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,3.78554694685953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0.476128862927481,0.0645889098360061,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0|short_description=p1@ENST00000512155}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-33bp_to_ENST00000512155_5end | |||
|coexpression_cluster_id=C2822 | |||
|description=CAGE_peak_1_at_ENST00000512155_5end | |||
|id=chr5:5140200..5140232,- | |||
|ontology_enrichment_celltype=CL:0002322!6.18e-18!5;CL:0000128!1.17e-16!7;CL:0000126!1.17e-16!7;CL:0000127!1.17e-16!7;CL:0002453!1.17e-16!7;CL:0002319!9.63e-13!25;CL:0000133!1.45e-11!59;CL:0002605!2.32e-11!3;CL:0000047!1.51e-10!8;CL:0000064!6.23e-10!3;CL:0005012!6.23e-10!3;CL:0000067!6.23e-10!3;CL:0002304!6.23e-10!3;CL:0000221!5.43e-09!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.42e-66;5!CL:0002605;7.97e-40;3!CL:0002321;8.67e-32;15!CL:0000128;1.69e-17;7!CL:0000126;1.69e-17;7!CL:0000127;1.69e-17;7!CL:0000222;5.42e-15;1!CL:0000148;1.52e-12;10!CL:0000147;4.01e-09;14!CL:0002319;4.66e-08;25!CL:0000047;6.80e-08;2!CL:0000243;1.52e-07;15!CL:0000125;1.52e-07;15!CL:0000095;8.37e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.12e-66,5;CL:0002605,3.35e-40,3;CL:0000128,1.17e-17,7;CL:0000126,1.17e-17,7;CL:0000127,1.17e-17,7;CL:0002453,1.17e-17,7;CL:0000148,1.44e-12,10;CL:0000541,1.44e-12,10;CL:0000333,8.08e-11,41;CL:0000133,4.17e-10,59;CL:0000147,3.85e-09,14;CL:0000221,3.14e-08,72;CL:0002319,4.09e-08,25;CL:0000243,1.31e-07,15;CL:0000125,1.31e-07,15;CL:0000030,1.31e-07,15;CL:0000339,1.31e-07,15;CL:0000095,7.34e-07,17;CL:0000123,7.34e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.77e-18;3!CL:0000133;1.81e-08;59!CL:0000339;1.52e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!6.23e-10!3;UBERON:0001775!6.23e-10!3;UBERON:0002037!3.66e-09!6;UBERON:0006215!3.66e-09!6;UBERON:0001017!3.71e-09!82;UBERON:0002680!6.31e-09!9;UBERON:0001895!6.31e-09!9;UBERON:0010092!6.31e-09!9;UBERON:0005743!1.53e-08!86;UBERON:0000488!1.50e-07!4;UBERON:0000073!2.39e-07!94;UBERON:0001016!2.39e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.01e-09;6!UBERON:0002680;9.10e-07;9!UBERON:0001895;9.10e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.06e-09,6;UBERON:0006215,1.06e-09,6;UBERON:0002680,9.37e-07,9;UBERON:0001895,9.37e-07,9;UBERON:0010092,9.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,1.71741592278634,1.50561867580173,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78118489001746,2.65059536642971,2.67246068599892,1.45125477021519,1.26160425437814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,1.30139853857622,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10579259931225,1.47773809476774,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.803765742325096,0.687697182986169,0,0,0,0.0607495566580247,0,0,3.04236611182989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0.150257608997218,0,0,0.181848659202559,0,0,0,0,0,0,3.78554694685953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0.20170506870352,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0.109265571963696,0,0.203977659483963,0,0.18378979906969,0,0,0,0,0,0,0.476128862927481,0.0645889098360061,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p1@ENST00000512155 | |||
}} |
Revision as of 15:48, 13 September 2013
Short description: | p1@ENST00000512155 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000512155_5end |
Coexpression cluster: | C2822_Neural_Astrocyte_kidney_mesodermal_H9_cerebellum_Neurons |
Association with transcript: | -33bp_to_ENST00000512155_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.12e-66 | 5 |
astrocyte of the cerebral cortex | 3.35e-40 | 3 |
oligodendrocyte | 1.17e-17 | 7 |
macroglial cell | 1.17e-17 | 7 |
astrocyte | 1.17e-17 | 7 |
oligodendrocyte precursor cell | 1.17e-17 | 7 |
melanocyte | 1.44e-12 | 10 |
melanoblast | 1.44e-12 | 10 |
migratory neural crest cell | 8.08e-11 | 41 |
neurectodermal cell | 4.17e-10 | 59 |
pigment cell | 3.85e-09 | 14 |
ectodermal cell | 3.14e-08 | 72 |
neural cell | 4.09e-08 | 25 |
glial cell (sensu Vertebrata) | 1.31e-07 | 15 |
glial cell | 1.31e-07 | 15 |
glioblast | 1.31e-07 | 15 |
glioblast (sensu Vertebrata) | 1.31e-07 | 15 |
neuron associated cell | 7.34e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 7.34e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.06e-09 | 6 |
rhombic lip | 1.06e-09 | 6 |
regional part of metencephalon | 9.37e-07 | 9 |
metencephalon | 9.37e-07 | 9 |
future metencephalon | 9.37e-07 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.