FFCP PHASE1:Mm9::chr18:33154628..33154632,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=113|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:33154628..33154632,+|id=chr18:33154628..33154632,+|ontology_enrichment_celltype=CL:0000791!4.29e-08!9;CL:0000789!4.29e-08!9;CL:0002420!4.29e-08!9;CL:0002419!4.29e-08!9;CL:0000790!4.29e-08!9|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.81e-22!29;UBERON:0002370!4.36e-19!23;UBERON:0000974!4.36e-19!23;UBERON:0004807!4.36e-19!23;UBERON:0005058!4.36e-19!23;UBERON:0003351!4.36e-19!23;UBERON:0009113!4.36e-19!23;UBERON:0003295!4.36e-19!23;UBERON:0009722!4.36e-19!23;UBERON:0005562!4.36e-19!23;UBERON:0007690!4.36e-19!23;UBERON:0006562!4.32e-18!24;UBERON:0003408!4.32e-18!24;UBERON:0001557!4.32e-18!24;UBERON:0001042!4.32e-18!24;UBERON:0008814!4.32e-18!24;UBERON:0009145!4.32e-18!24;UBERON:0000072!1.49e-15!27;UBERON:0000063!2.40e-14!35;UBERON:0002390!2.80e-12!45;UBERON:0003061!2.80e-12!45;UBERON:0007811!2.80e-12!86;UBERON:0000064!1.50e-11!99;UBERON:0002193!3.67e-11!48;UBERON:0000153!1.53e-10!94;UBERON:0005057!3.53e-10!51;UBERON:0000065!1.08e-08!41;UBERON:0001004!2.21e-08!42|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.03e-17,23;UBERON:0000974,3.03e-17,23;UBERON:0004807,3.03e-17,23;UBERON:0005058,3.03e-17,23;UBERON:0003351,3.03e-17,23;UBERON:0009113,3.03e-17,23;UBERON:0003295,3.03e-17,23;UBERON:0009722,3.03e-17,23;UBERON:0005562,3.03e-17,23;UBERON:0007690,3.03e-17,23;UBERON:0006562,1.56e-16,24;UBERON:0003408,1.56e-16,24;UBERON:0001557,1.56e-16,24;UBERON:0001042,1.56e-16,24;UBERON:0008814,1.56e-16,24;UBERON:0009145,1.56e-16,24;UBERON:0000072,1.03e-14,27;UBERON:0004177,1.05e-13,29;UBERON:0005057,1.05e-13,29;UBERON:0000077,2.25e-11,35;UBERON:0007811,4.64e-11,36;UBERON:0000065,1.02e-09,41;UBERON:0001004,1.74e-09,42;UBERON:0000153,2.88e-09,43;UBERON:0002390,7.43e-09,45;UBERON:0003061,7.43e-09,45;UBERON:0002193,2.66e-08,48;UBERON:0002405,2.66e-08,48;UBERON:0003929,3.05e-07,55|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,1.36960583944965,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.77952493786677,0.179026695667481,0.596044064343795,1.20195449519969,0.590758108698309,0.605798699688886,1.06689529317,2.11734988787365,0.877120926657772,1.44317762460494,1.63627663054197,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.68741272937475,0,1.5107877947794,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0|short_description=p@chr18:33154628..33154632,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=113 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:33154628..33154632,+ | |||
|id=chr18:33154628..33154632,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.29e-08!9;CL:0000789!4.29e-08!9;CL:0002420!4.29e-08!9;CL:0002419!4.29e-08!9;CL:0000790!4.29e-08!9 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.81e-22!29;UBERON:0002370!4.36e-19!23;UBERON:0000974!4.36e-19!23;UBERON:0004807!4.36e-19!23;UBERON:0005058!4.36e-19!23;UBERON:0003351!4.36e-19!23;UBERON:0009113!4.36e-19!23;UBERON:0003295!4.36e-19!23;UBERON:0009722!4.36e-19!23;UBERON:0005562!4.36e-19!23;UBERON:0007690!4.36e-19!23;UBERON:0006562!4.32e-18!24;UBERON:0003408!4.32e-18!24;UBERON:0001557!4.32e-18!24;UBERON:0001042!4.32e-18!24;UBERON:0008814!4.32e-18!24;UBERON:0009145!4.32e-18!24;UBERON:0000072!1.49e-15!27;UBERON:0000063!2.40e-14!35;UBERON:0002390!2.80e-12!45;UBERON:0003061!2.80e-12!45;UBERON:0007811!2.80e-12!86;UBERON:0000064!1.50e-11!99;UBERON:0002193!3.67e-11!48;UBERON:0000153!1.53e-10!94;UBERON:0005057!3.53e-10!51;UBERON:0000065!1.08e-08!41;UBERON:0001004!2.21e-08!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.03e-17,23;UBERON:0000974,3.03e-17,23;UBERON:0004807,3.03e-17,23;UBERON:0005058,3.03e-17,23;UBERON:0003351,3.03e-17,23;UBERON:0009113,3.03e-17,23;UBERON:0003295,3.03e-17,23;UBERON:0009722,3.03e-17,23;UBERON:0005562,3.03e-17,23;UBERON:0007690,3.03e-17,23;UBERON:0006562,1.56e-16,24;UBERON:0003408,1.56e-16,24;UBERON:0001557,1.56e-16,24;UBERON:0001042,1.56e-16,24;UBERON:0008814,1.56e-16,24;UBERON:0009145,1.56e-16,24;UBERON:0000072,1.03e-14,27;UBERON:0004177,1.05e-13,29;UBERON:0005057,1.05e-13,29;UBERON:0000077,2.25e-11,35;UBERON:0007811,4.64e-11,36;UBERON:0000065,1.02e-09,41;UBERON:0001004,1.74e-09,42;UBERON:0000153,2.88e-09,43;UBERON:0002390,7.43e-09,45;UBERON:0003061,7.43e-09,45;UBERON:0002193,2.66e-08,48;UBERON:0002405,2.66e-08,48;UBERON:0003929,3.05e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,1.36960583944965,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.77952493786677,0.179026695667481,0.596044064343795,1.20195449519969,0.590758108698309,0.605798699688886,1.06689529317,2.11734988787365,0.877120926657772,1.44317762460494,1.63627663054197,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.68741272937475,0,1.5107877947794,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p@chr18:33154628..33154632,+ | |||
}} |
Revision as of 15:55, 13 September 2013
Short description: | p@chr18:33154628..33154632, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:33154628..33154632, + |
Coexpression cluster: | MCL_coexpression_mm9:113 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.03e-17 | 23 |
neck | 3.03e-17 | 23 |
respiratory system epithelium | 3.03e-17 | 23 |
hemolymphoid system gland | 3.03e-17 | 23 |
pharyngeal epithelium | 3.03e-17 | 23 |
thymic region | 3.03e-17 | 23 |
pharyngeal gland | 3.03e-17 | 23 |
entire pharyngeal arch endoderm | 3.03e-17 | 23 |
thymus primordium | 3.03e-17 | 23 |
early pharyngeal endoderm | 3.03e-17 | 23 |
pharynx | 1.56e-16 | 24 |
gland of gut | 1.56e-16 | 24 |
upper respiratory tract | 1.56e-16 | 24 |
chordate pharynx | 1.56e-16 | 24 |
pharyngeal arch system | 1.56e-16 | 24 |
pharyngeal region of foregut | 1.56e-16 | 24 |
segment of respiratory tract | 1.03e-14 | 27 |
hemopoietic organ | 1.05e-13 | 29 |
immune organ | 1.05e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 2.25e-11 | 35 |
craniocervical region | 4.64e-11 | 36 |
respiratory tract | 1.02e-09 | 41 |
respiratory system | 1.74e-09 | 42 |
anterior region of body | 2.88e-09 | 43 |
hematopoietic system | 7.43e-09 | 45 |
blood island | 7.43e-09 | 45 |
hemolymphoid system | 2.66e-08 | 48 |
immune system | 2.66e-08 | 48 |
gut epithelium | 3.05e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.