FFCP PHASE1:Mm9::chr18:36885854..36885880,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2237|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:36885854..36885880,-|id=chr18:36885854..36885880,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,7.25e-08,3;CL:0002202,7.25e-08,3;CL:0000069,7.25e-08,3;CL:0002632,7.25e-08,3;CL:0002368,7.25e-08,3;CL:0000307,7.25e-08,3;CL:0000377,7.25e-08,3;CL:0002092,3.39e-07,3;CL:0002540,3.39e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!1.73e-09!17;UBERON:0005181!1.73e-09!17;UBERON:0002224!1.73e-09!17;UBERON:0000915!1.73e-09!17;UBERON:0008947!1.73e-09!17;UBERON:0003258!1.73e-09!17;UBERON:0005153!5.05e-07!17;UBERON:0002048!5.34e-07!14;UBERON:0000117!5.34e-07!14;UBERON:0000171!5.34e-07!14;UBERON:0000170!5.34e-07!14;UBERON:0005597!5.34e-07!14;UBERON:0000118!5.34e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.27e-10,17;UBERON:0005181,1.27e-10,17;UBERON:0002224,1.27e-10,17;UBERON:0000915,1.27e-10,17;UBERON:0008947,1.27e-10,17;UBERON:0003258,1.27e-10,17;UBERON:0000474,4.60e-10,9;UBERON:0003134,2.90e-08,8;UBERON:0003100,4.99e-08,11;UBERON:0003126,7.25e-08,3;UBERON:0001005,7.25e-08,3;UBERON:0007196,7.25e-08,3;UBERON:0001558,7.25e-08,3|phase1_expression=0,0,0,0,0,1.6787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.639969691173627,0.45881856213434,1.72269589234506,1.29228598847722,0.646413698057667,0.190023419456374,0.252030129759931,2.66076612786366,0,0,0,3.75507105676657,1.16364251750945,0.408338712524738,2.09265815368454,2.3440060335714,0,1.17646297606203,1.36609096991689,0.485510353031154,1.25896817975577,1.52065396829272,2.0190142737785,0,0.218025156380447,0,0.58328969722285,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,3.5995988691256,3.9554654502679,2.1314403448383,0.898800331555214,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,1.28326477414318,0,0,14.5048997477513,11.4011939463794,17.1878311305026,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0.359445373517761,0,0.762421362438388,0,0,0,0,0.255715457330331,0,0,0.611036183101898,0,0.505445516867349,0,0.260240885925407,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0.432276099749388,0.995706366271836,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,4.24932337383191,0,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,1.6663054862021,1.17080188714679,1.41871629695572,0.664394068946325,0.637819074629948,1.63863314715738,2.59027472798843,4.05017364028232,10.5553898757491,4.89515115436839,0.491764273019036,0.551873492609465,0.160550589987792,0,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.955875191810208,1.33679204449436,1.13230612315533,0.404810701674894,0,1.58115111178609,0,1.56134093729095,1.42452482933804,1.95464351224291,6.43383479592888,1.32745138339963,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,1.06949213515416,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,1.27099242518292,0,0,0,0,0.358117032009409,0,0,0.18542530201051,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0,0,0,0.609958401380546,0.540026704109006,0.209088296014469,1.09181281873089,2.29269388854195,0.578574190077352,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,11.721703953105,1.2862102744744,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p@chr18:36885854..36885880,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2237 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:36885854..36885880,- | |||
|id=chr18:36885854..36885880,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.25e-08,3;CL:0002202,7.25e-08,3;CL:0000069,7.25e-08,3;CL:0002632,7.25e-08,3;CL:0002368,7.25e-08,3;CL:0000307,7.25e-08,3;CL:0000377,7.25e-08,3;CL:0002092,3.39e-07,3;CL:0002540,3.39e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.73e-09!17;UBERON:0005181!1.73e-09!17;UBERON:0002224!1.73e-09!17;UBERON:0000915!1.73e-09!17;UBERON:0008947!1.73e-09!17;UBERON:0003258!1.73e-09!17;UBERON:0005153!5.05e-07!17;UBERON:0002048!5.34e-07!14;UBERON:0000117!5.34e-07!14;UBERON:0000171!5.34e-07!14;UBERON:0000170!5.34e-07!14;UBERON:0005597!5.34e-07!14;UBERON:0000118!5.34e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,1.27e-10,17;UBERON:0005181,1.27e-10,17;UBERON:0002224,1.27e-10,17;UBERON:0000915,1.27e-10,17;UBERON:0008947,1.27e-10,17;UBERON:0003258,1.27e-10,17;UBERON:0000474,4.60e-10,9;UBERON:0003134,2.90e-08,8;UBERON:0003100,4.99e-08,11;UBERON:0003126,7.25e-08,3;UBERON:0001005,7.25e-08,3;UBERON:0007196,7.25e-08,3;UBERON:0001558,7.25e-08,3 | |||
|phase1_expression=0,0,0,0,0,1.6787927191189,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.639969691173627,0.45881856213434,1.72269589234506,1.29228598847722,0.646413698057667,0.190023419456374,0.252030129759931,2.66076612786366,0,0,0,3.75507105676657,1.16364251750945,0.408338712524738,2.09265815368454,2.3440060335714,0,1.17646297606203,1.36609096991689,0.485510353031154,1.25896817975577,1.52065396829272,2.0190142737785,0,0.218025156380447,0,0.58328969722285,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,3.5995988691256,3.9554654502679,2.1314403448383,0.898800331555214,0.768436610643109,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,1.28326477414318,0,0,14.5048997477513,11.4011939463794,17.1878311305026,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0.144599356919912,0,0.161766849947409,0,0,0,0,0,0.510914110417183,0.359445373517761,0,0.762421362438388,0,0,0,0,0.255715457330331,0,0,0.611036183101898,0,0.505445516867349,0,0.260240885925407,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0.213288250535234,0,0.257734922644187,0,0,0.190225626112559,0,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0.432276099749388,0.995706366271836,0,0.114248512609729,0,0.203651327845314,0,0,0.0632365371242573,0.147610147979602,0,0.740382983530803,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0.372140947668503,0,0,0,0,4.24932337383191,0,0.162964976442026,0.169745085775188,0.234690248288502,0.335012514883631,1.6663054862021,1.17080188714679,1.41871629695572,0.664394068946325,0.637819074629948,1.63863314715738,2.59027472798843,4.05017364028232,10.5553898757491,4.89515115436839,0.491764273019036,0.551873492609465,0.160550589987792,0,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.955875191810208,1.33679204449436,1.13230612315533,0.404810701674894,0,1.58115111178609,0,1.56134093729095,1.42452482933804,1.95464351224291,6.43383479592888,1.32745138339963,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,1.06949213515416,0.632073515871632,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0,0,0,0,1.27099242518292,0,0,0,0,0.358117032009409,0,0,0.18542530201051,0,0,0,0,0,0,0.509935289981566,0.559805809294632,0,0,0,0.609958401380546,0.540026704109006,0.209088296014469,1.09181281873089,2.29269388854195,0.578574190077352,0,1.68499465279331,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.632022241256357,0,0,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0,0.100826185136841,0.194915761479505,0,0,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,11.721703953105,1.2862102744744,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr18:36885854..36885880,- | |||
}} |
Revision as of 16:04, 13 September 2013
Short description: | p@chr18:36885854..36885880, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:36885854..36885880, - |
Coexpression cluster: | MCL_coexpression_mm9:2237 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.25e-08 | 3 |
epithelial cell of tracheobronchial tree | 7.25e-08 | 3 |
branched duct epithelial cell | 7.25e-08 | 3 |
epithelial cell of lower respiratory tract | 7.25e-08 | 3 |
respiratory epithelial cell | 7.25e-08 | 3 |
tracheal epithelial cell | 7.25e-08 | 3 |
tracheoblast | 7.25e-08 | 3 |
bone marrow cell | 3.39e-07 | 3 |
mesenchymal stem cell of the bone marrow | 3.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 1.27e-10 | 17 |
thoracic segment organ | 1.27e-10 | 17 |
thoracic cavity | 1.27e-10 | 17 |
thoracic segment of trunk | 1.27e-10 | 17 |
respiratory primordium | 1.27e-10 | 17 |
endoderm of foregut | 1.27e-10 | 17 |
female reproductive system | 4.60e-10 | 9 |
female reproductive organ | 2.90e-08 | 8 |
female organism | 4.99e-08 | 11 |
trachea | 7.25e-08 | 3 |
respiratory airway | 7.25e-08 | 3 |
tracheobronchial tree | 7.25e-08 | 3 |
lower respiratory tract | 7.25e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.