FFCP PHASE1:Mm9::chr18:70689873..70689938,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26447|HGNC=|UniProt=E0CZD6|association_with_transcript=0bp_to_ENSMUST00000160713_5end|description=CAGE_peak_1_at_Poli_5end|id=chr18:70689873..70689938,-|ontology_enrichment_celltype=CL:0000988!3.34e-09!32;CL:0002032!3.34e-09!32;CL:0000037!3.34e-09!32;CL:0000566!3.34e-09!32;CL:0000837!3.34e-09!32;CL:0002031!5.76e-09!25|ontology_enrichment_celltype_v019_2=CL:0000988,3.30e-09,32;CL:0002032,3.30e-09,32;CL:0000037,3.30e-09,32;CL:0000837,3.30e-09,32;CL:0002031,5.69e-09,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.35e-10!48;UBERON:0004177!6.24e-10!29;UBERON:0002390!2.23e-09!45;UBERON:0003061!2.23e-09!45;UBERON:0000949!4.28e-09!72;UBERON:0003408!4.57e-08!24;UBERON:0002370!5.92e-08!23;UBERON:0000974!5.92e-08!23;UBERON:0004807!5.92e-08!23;UBERON:0005058!5.92e-08!23;UBERON:0003351!5.92e-08!23;UBERON:0009113!5.92e-08!23;UBERON:0003295!5.92e-08!23;UBERON:0009722!5.92e-08!23;UBERON:0005562!5.92e-08!23;UBERON:0007690!5.92e-08!23;UBERON:0002405!1.01e-07!70;UBERON:0002530!1.23e-07!65;UBERON:0002553!3.39e-07!39;UBERON:0006562!4.59e-07!24;UBERON:0001557!4.59e-07!24;UBERON:0001042!4.59e-07!24;UBERON:0008814!4.59e-07!24;UBERON:0009145!4.59e-07!24;UBERON:0003886!4.74e-07!38;UBERON:0002323!9.13e-07!37;UBERON:0004458!9.13e-07!37;UBERON:0002368!9.33e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.34e-10,48;UBERON:0002405,2.34e-10,48;UBERON:0004177,6.01e-10,29;UBERON:0005057,6.01e-10,29;UBERON:0002390,2.22e-09,45;UBERON:0003061,2.22e-09,45;UBERON:0000949,4.07e-09,72;UBERON:0007811,1.61e-08,36;UBERON:0000077,3.19e-08,35;UBERON:0003408,4.40e-08,24;UBERON:0002370,5.71e-08,23;UBERON:0000974,5.71e-08,23;UBERON:0004807,5.71e-08,23;UBERON:0005058,5.71e-08,23;UBERON:0003351,5.71e-08,23;UBERON:0009113,5.71e-08,23;UBERON:0003295,5.71e-08,23;UBERON:0009722,5.71e-08,23;UBERON:0005562,5.71e-08,23;UBERON:0007690,5.71e-08,23;UBERON:0002530,1.18e-07,65;UBERON:0002553,3.39e-07,39;UBERON:0006562,4.44e-07,24;UBERON:0001557,4.44e-07,24;UBERON:0001042,4.44e-07,24;UBERON:0008814,4.44e-07,24;UBERON:0009145,4.44e-07,24;UBERON:0003886,4.74e-07,38;UBERON:0002368,8.93e-07,60;UBERON:0002323,9.13e-07,37;UBERON:0004458,9.13e-07,37|phase1_expression=5.2849119544582,1.04692622291808,0.909998478779072,0.30246421130683,1.50268718983904,3.69334398206158,4.20502753071946,15.6239221364307,2.25261955442667,6.78787126333781,6.67750076079469,11.1681022593471,17.8048759128454,15.3859908257435,7.32841475994458,8.50396123037269,6.99561878128147,13.7226041930833,13.7114433605739,12.3072999021429,4.5072943780067,14.3971879241284,12.7987896678078,5.75972722056264,5.96464130774642,0,2.58457197695445,1.939241094173,3.6104449696711,4.03248207615889,4.6563407237614,6.98533740805594,10.4561013889377,15.8481681015439,12.7094712690561,6.31691652362271,8.98345167554424,1.25559489221072,0,2.09409497589519,2.94115744015507,2.73218193983378,2.91306211818692,4.02869817521847,2.73717714292689,2.75320128242522,3.12956537739216,2.8343270329458,0.659058548203415,2.13872888981712,1.95980990275508,1.43752564364972,8.72469551500229,9.42970784614748,13.4437519656986,1.02903774414379,2.0057340795713,0.515672092277442,3.84401275633236,2.64495489636016,7.60597684207415,2.37191172448392,1.77858959222228,1.3498495759221,2.96659908770092,0.7104801149461,0.299600110518405,2.68952813725088,4.87341177849845,2.97013064329719,4.20649922702764,1.42825492201902,1.98781686856452,3.55223317723367,4.69642807989358,3.67687514644008,3.30347642998166,6.00130489000382,3.84016333140609,4.61602007055678,4.66586982372289,5.73004707612436,3.35019598801657,2.8138130501584,6.26472815884921,2.94628585473668,4.27115042397309,5.40558392893372,1.4387976733305,2.04043212288321,3.18850937571846,3.44169550792555,0,4.85732872474035,5.19821133958135,5.37632264516803,4.21333260395256,3.57903677413921,2.33807404142582,0.35333957451034,5.7745802108439,2.56652954828636,0,7.11066703153331,1.29894624606728,1.52015919285059,3.53867111510348,4.33898742932428,15.5362730188303,4.60170631100957,5.20455980298408,4.56698217468212,4.84292544237723,4.82312449768392,3.76283862834255,5.78066320116507,2.71914464507811,3.61498392299779,2.65383165584962,4.52947179852746,5.52103796150984,4.84875253135222,7.45567044872489,2.63502717310392,2.93225389538837,3.32094171771169,3.71426885968353,8.39863823390771,4.70159840170339,4.6435098215495,3.20250421973039,7.03664371832041,7.82209440865244,4.34716277461562,3.1168206683934,4.70499662896497,3.97173519016234,5.22509276562391,6.57079171927554,4.20883711772948,6.11566081924707,5.9774547152703,5.22180176435513,6.48030716693575,5.17077393550092,5.63700369253339,5.43470002446427,6.20888089773638,3.01795190105979,3.40390944302075,3.34307135911503,2.41115305670332,3.89266148915837,4.52727816478817,4.32142486456681,6.36909653819178,4.21327912387941,6.69104558498259,6.25159698670304,3.10688658803253,4.45599513964083,3.96136535214233,3.78791576936336,3.54175617145327,4.62801338662135,3.95307706075693,1.87791380979733,2.10177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| ||
|EntrezGene=26447 | |||
|HGNC= | |||
|UniProt=E0CZD6 | |||
|association_with_transcript=0bp_to_ENSMUST00000160713_5end | |||
|description=CAGE_peak_1_at_Poli_5end | |||
|id=chr18:70689873..70689938,- | |||
|ontology_enrichment_celltype=CL:0000988!3.34e-09!32;CL:0002032!3.34e-09!32;CL:0000037!3.34e-09!32;CL:0000566!3.34e-09!32;CL:0000837!3.34e-09!32;CL:0002031!5.76e-09!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.30e-09,32;CL:0002032,3.30e-09,32;CL:0000037,3.30e-09,32;CL:0000837,3.30e-09,32;CL:0002031,5.69e-09,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.35e-10!48;UBERON:0004177!6.24e-10!29;UBERON:0002390!2.23e-09!45;UBERON:0003061!2.23e-09!45;UBERON:0000949!4.28e-09!72;UBERON:0003408!4.57e-08!24;UBERON:0002370!5.92e-08!23;UBERON:0000974!5.92e-08!23;UBERON:0004807!5.92e-08!23;UBERON:0005058!5.92e-08!23;UBERON:0003351!5.92e-08!23;UBERON:0009113!5.92e-08!23;UBERON:0003295!5.92e-08!23;UBERON:0009722!5.92e-08!23;UBERON:0005562!5.92e-08!23;UBERON:0007690!5.92e-08!23;UBERON:0002405!1.01e-07!70;UBERON:0002530!1.23e-07!65;UBERON:0002553!3.39e-07!39;UBERON:0006562!4.59e-07!24;UBERON:0001557!4.59e-07!24;UBERON:0001042!4.59e-07!24;UBERON:0008814!4.59e-07!24;UBERON:0009145!4.59e-07!24;UBERON:0003886!4.74e-07!38;UBERON:0002323!9.13e-07!37;UBERON:0004458!9.13e-07!37;UBERON:0002368!9.33e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.34e-10,48;UBERON:0002405,2.34e-10,48;UBERON:0004177,6.01e-10,29;UBERON:0005057,6.01e-10,29;UBERON:0002390,2.22e-09,45;UBERON:0003061,2.22e-09,45;UBERON:0000949,4.07e-09,72;UBERON:0007811,1.61e-08,36;UBERON:0000077,3.19e-08,35;UBERON:0003408,4.40e-08,24;UBERON:0002370,5.71e-08,23;UBERON:0000974,5.71e-08,23;UBERON:0004807,5.71e-08,23;UBERON:0005058,5.71e-08,23;UBERON:0003351,5.71e-08,23;UBERON:0009113,5.71e-08,23;UBERON:0003295,5.71e-08,23;UBERON:0009722,5.71e-08,23;UBERON:0005562,5.71e-08,23;UBERON:0007690,5.71e-08,23;UBERON:0002530,1.18e-07,65;UBERON:0002553,3.39e-07,39;UBERON:0006562,4.44e-07,24;UBERON:0001557,4.44e-07,24;UBERON:0001042,4.44e-07,24;UBERON:0008814,4.44e-07,24;UBERON:0009145,4.44e-07,24;UBERON:0003886,4.74e-07,38;UBERON:0002368,8.93e-07,60;UBERON:0002323,9.13e-07,37;UBERON:0004458,9.13e-07,37 | |||
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| |||
|short_description=p1@Poli | |||
}} |
Revision as of 16:42, 13 September 2013
Short description: | p1@Poli |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Poli_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000160713_5end |
EntrezGene: | Poli |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.30e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.30e-09 | 32 |
hematopoietic stem cell | 3.30e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.30e-09 | 32 |
hematopoietic lineage restricted progenitor cell | 5.69e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.34e-10 | 48 |
immune system | 2.34e-10 | 48 |
hemopoietic organ | 6.01e-10 | 29 |
immune organ | 6.01e-10 | 29 |
hematopoietic system | 2.22e-09 | 45 |
blood island | 2.22e-09 | 45 |
endocrine system | 4.07e-09 | 72 |
craniocervical region | 1.61e-08 | 36 |
mixed endoderm/mesoderm-derived structure | 3.19e-08 | 35 |
gland of gut | 4.40e-08 | 24 |
thymus | 5.71e-08 | 23 |
neck | 5.71e-08 | 23 |
respiratory system epithelium | 5.71e-08 | 23 |
hemolymphoid system gland | 5.71e-08 | 23 |
pharyngeal epithelium | 5.71e-08 | 23 |
thymic region | 5.71e-08 | 23 |
pharyngeal gland | 5.71e-08 | 23 |
entire pharyngeal arch endoderm | 5.71e-08 | 23 |
thymus primordium | 5.71e-08 | 23 |
early pharyngeal endoderm | 5.71e-08 | 23 |
gland | 1.18e-07 | 65 |
anatomical cavity | 3.39e-07 | 39 |
pharynx | 4.44e-07 | 24 |
upper respiratory tract | 4.44e-07 | 24 |
chordate pharynx | 4.44e-07 | 24 |
pharyngeal arch system | 4.44e-07 | 24 |
pharyngeal region of foregut | 4.44e-07 | 24 |
body cavity precursor | 4.74e-07 | 38 |
endocrine gland | 8.93e-07 | 60 |
body cavity | 9.13e-07 | 37 |
body cavity or lining | 9.13e-07 | 37 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.