FFCP PHASE1:Mm9::chr19:41444738..41444749,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:41444738..41444749,-|id=chr19:41444738..41444749,-|ontology_enrichment_celltype=CL:0000553!2.88e-12!6;CL:0000556!2.88e-12!6;CL:0000988!2.83e-08!32;CL:0002032!2.83e-08!32;CL:0000037!2.83e-08!32;CL:0000566!2.83e-08!32;CL:0000837!2.83e-08!32;CL:0000050!4.99e-08!9;CL:0002031!9.41e-08!25|ontology_enrichment_celltype_v019_2=CL:0000553,8.72e-30,6;CL:0000556,8.72e-30,6;CL:0000050,4.69e-20,9;CL:0000839,4.85e-14,13;CL:0000945,3.34e-12,1;CL:0000236,3.34e-12,1;CL:0000826,3.34e-12,1;CL:0000763,1.71e-11,16;CL:0002031,2.91e-11,25;CL:0000049,9.64e-10,19;CL:0000988,7.67e-09,32;CL:0002032,7.67e-09,32;CL:0000037,7.67e-09,32;CL:0000837,7.67e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!9.91e-08!6;UBERON:0004457!9.91e-08!6;UBERON:0000042!9.91e-08!6;UBERON:0004854!9.91e-08!6;UBERON:0009034!9.91e-08!6;UBERON:0002095!9.91e-08!6;UBERON:0004782!9.91e-08!6;UBERON:0003281!9.91e-08!6;UBERON:0009664!9.91e-08!6;UBERON:0002296!9.91e-08!6;UBERON:0005602!9.91e-08!6;UBERON:0001179!9.91e-08!6;UBERON:0006293!9.91e-08!6;UBERON:0000992!1.19e-07!3;UBERON:0003100!2.11e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.59e-12,1;UBERON:0001097,2.59e-12,1;UBERON:0003968,2.59e-12,1;UBERON:0001467,2.59e-12,1;UBERON:0002371,1.71e-11,16;UBERON:0002193,3.46e-11,48;UBERON:0002405,3.46e-11,48;UBERON:0002390,7.68e-09,45;UBERON:0003061,7.68e-09,45;UBERON:0001474,1.83e-08,22;UBERON:0004765,1.83e-08,22;UBERON:0001434,1.83e-08,22;UBERON:0002106,4.03e-08,6;UBERON:0004457,4.03e-08,6;UBERON:0000042,4.03e-08,6;UBERON:0004854,4.03e-08,6;UBERON:0009034,4.03e-08,6;UBERON:0002095,4.03e-08,6;UBERON:0004782,4.03e-08,6;UBERON:0003281,4.03e-08,6;UBERON:0009664,4.03e-08,6;UBERON:0002296,4.03e-08,6;UBERON:0005602,4.03e-08,6;UBERON:0001179,4.03e-08,6;UBERON:0006293,4.03e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0,7.41336088591859,6.03303507865251,4.66828616977833,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19456515144341,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,4.40194402200192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.05045056957423,0,0,0.753473828018764,1.50363650493128,0.686334519619568,0,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr19:41444738..41444749,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:41444738..41444749,- | |||
|id=chr19:41444738..41444749,- | |||
|ontology_enrichment_celltype=CL:0000553!2.88e-12!6;CL:0000556!2.88e-12!6;CL:0000988!2.83e-08!32;CL:0002032!2.83e-08!32;CL:0000037!2.83e-08!32;CL:0000566!2.83e-08!32;CL:0000837!2.83e-08!32;CL:0000050!4.99e-08!9;CL:0002031!9.41e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.72e-30,6;CL:0000556,8.72e-30,6;CL:0000050,4.69e-20,9;CL:0000839,4.85e-14,13;CL:0000945,3.34e-12,1;CL:0000236,3.34e-12,1;CL:0000826,3.34e-12,1;CL:0000763,1.71e-11,16;CL:0002031,2.91e-11,25;CL:0000049,9.64e-10,19;CL:0000988,7.67e-09,32;CL:0002032,7.67e-09,32;CL:0000037,7.67e-09,32;CL:0000837,7.67e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!9.91e-08!6;UBERON:0004457!9.91e-08!6;UBERON:0000042!9.91e-08!6;UBERON:0004854!9.91e-08!6;UBERON:0009034!9.91e-08!6;UBERON:0002095!9.91e-08!6;UBERON:0004782!9.91e-08!6;UBERON:0003281!9.91e-08!6;UBERON:0009664!9.91e-08!6;UBERON:0002296!9.91e-08!6;UBERON:0005602!9.91e-08!6;UBERON:0001179!9.91e-08!6;UBERON:0006293!9.91e-08!6;UBERON:0000992!1.19e-07!3;UBERON:0003100!2.11e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.59e-12,1;UBERON:0001097,2.59e-12,1;UBERON:0003968,2.59e-12,1;UBERON:0001467,2.59e-12,1;UBERON:0002371,1.71e-11,16;UBERON:0002193,3.46e-11,48;UBERON:0002405,3.46e-11,48;UBERON:0002390,7.68e-09,45;UBERON:0003061,7.68e-09,45;UBERON:0001474,1.83e-08,22;UBERON:0004765,1.83e-08,22;UBERON:0001434,1.83e-08,22;UBERON:0002106,4.03e-08,6;UBERON:0004457,4.03e-08,6;UBERON:0000042,4.03e-08,6;UBERON:0004854,4.03e-08,6;UBERON:0009034,4.03e-08,6;UBERON:0002095,4.03e-08,6;UBERON:0004782,4.03e-08,6;UBERON:0003281,4.03e-08,6;UBERON:0009664,4.03e-08,6;UBERON:0002296,4.03e-08,6;UBERON:0005602,4.03e-08,6;UBERON:0001179,4.03e-08,6;UBERON:0006293,4.03e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0,7.41336088591859,6.03303507865251,4.66828616977833,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19456515144341,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,4.40194402200192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,2.05045056957423,0,0,0.753473828018764,1.50363650493128,0.686334519619568,0,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240390899039938,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr19:41444738..41444749,- | |||
}} |
Revision as of 17:37, 13 September 2013
Short description: | p@chr19:41444738..41444749, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:41444738..41444749, - |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.72e-30 | 6 |
megakaryocyte | 8.72e-30 | 6 |
megakaryocyte-erythroid progenitor cell | 4.69e-20 | 9 |
myeloid lineage restricted progenitor cell | 4.85e-14 | 13 |
lymphocyte of B lineage | 3.34e-12 | 1 |
B cell | 3.34e-12 | 1 |
pro-B cell | 3.34e-12 | 1 |
myeloid cell | 1.71e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 2.91e-11 | 25 |
common myeloid progenitor | 9.64e-10 | 19 |
hematopoietic cell | 7.67e-09 | 32 |
hematopoietic oligopotent progenitor cell | 7.67e-09 | 32 |
hematopoietic stem cell | 7.67e-09 | 32 |
hematopoietic multipotent progenitor cell | 7.67e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.59e-12 | 1 |
axillary lymph node | 2.59e-12 | 1 |
peripheral lymph node | 2.59e-12 | 1 |
shoulder | 2.59e-12 | 1 |
bone marrow | 1.71e-11 | 16 |
hemolymphoid system | 3.46e-11 | 48 |
immune system | 3.46e-11 | 48 |
hematopoietic system | 7.68e-09 | 45 |
blood island | 7.68e-09 | 45 |
bone element | 1.83e-08 | 22 |
skeletal element | 1.83e-08 | 22 |
skeletal system | 1.83e-08 | 22 |
spleen | 4.03e-08 | 6 |
cavity lining | 4.03e-08 | 6 |
serous membrane | 4.03e-08 | 6 |
gastrointestinal system mesentery | 4.03e-08 | 6 |
stomach region | 4.03e-08 | 6 |
mesentery | 4.03e-08 | 6 |
gastrointestinal system serosa | 4.03e-08 | 6 |
mesentery of stomach | 4.03e-08 | 6 |
gut mesentery | 4.03e-08 | 6 |
dorsal mesentery | 4.03e-08 | 6 |
dorsal mesogastrium | 4.03e-08 | 6 |
peritoneal cavity | 4.03e-08 | 6 |
spleen primordium | 4.03e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.