FFCP PHASE1:Hg19::chr6:144980558..144980569,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7402|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12635|TSSclassifier=N|UniProt=Q5T098|association_with_transcript=-410bp_to_ENST00000367525_5end|coexpression_cluster_id=C92|description=CAGE_peak_30_at_UTRN_5end|id=chr6:144980558..144980569,+|ontology_enrichment_celltype=CL:0002057!1.86e-63!42;CL:0000860!1.07e-58!45;CL:0002194!6.48e-39!63;CL:0000576!6.48e-39!63;CL:0000040!6.48e-39!63;CL:0000559!6.48e-39!63;CL:0002009!1.70e-37!65;CL:0000766!5.85e-36!76;CL:0000839!2.65e-34!70;CL:0000557!1.02e-33!71;CL:0002393!1.01e-31!9;CL:0002397!1.01e-31!9;CL:0002087!2.25e-23!119;CL:0000738!4.62e-23!140;CL:0000763!6.97e-22!112;CL:0000049!6.97e-22!112;CL:0002031!1.70e-17!124;CL:0000037!4.16e-17!172;CL:0000566!4.16e-17!172;CL:0000988!1.11e-15!182;CL:0002032!2.16e-13!165;CL:0000837!2.16e-13!165;CL:0000875!4.80e-12!3;CL:0002396!4.80e-12!3;CL:0000842!4.33e-11!3;CL:0000224!2.05e-08!4;CL:0002320!3.21e-07!365|ontology_enrichment_celltype_v019=CL:0000875;2.20e-60;3!CL:0002396;2.20e-60;3!CL:0002393;1.77e-30;6!CL:0002397;1.77e-30;6!CL:0000576;8.97e-19;48!CL:0000766;4.63e-12;69!CL:0002087;7.11e-08;104!CL:0000226;7.50e-08;3!CL:0000842;7.50e-08;3!CL:0000763;2.60e-07;100|ontology_enrichment_celltype_v019_2=CL:0002393,3.09e-79,9;CL:0002397,3.09e-79,9;CL:0000875,2.43e-60,3;CL:0002396,2.43e-60,3;CL:0000860,9.50e-38,42;CL:0002057,9.50e-38,42;CL:0000473,5.23e-33,48;CL:0000234,5.23e-33,48;CL:0002194,2.32e-26,59;CL:0000576,2.32e-26,59;CL:0000040,2.32e-26,59;CL:0000559,2.32e-26,59;CL:0002009,1.67e-25,61;CL:0000839,1.40e-23,66;CL:0000557,3.14e-23,67;CL:0000766,1.28e-21,72;CL:0002087,1.17e-16,115;CL:0000763,2.31e-14,108;CL:0000049,2.31e-14,108;CL:0000738,4.83e-14,136;CL:0002031,6.76e-13,120;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0002032,1.64e-09,161;CL:0000837,1.64e-09,161;CL:0000226,8.29e-08,3;CL:0000842,8.29e-08,3|ontology_enrichment_development_v019=CL:0002057;3.43e-26;42!CL:0000049;3.19e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.12e-31!102;UBERON:0003061!7.12e-31!102;UBERON:0002193!3.94e-29!112;UBERON:0002371!4.21e-29!80;UBERON:0001474!1.47e-26!86;UBERON:0004765!3.40e-23!101;UBERON:0001434!3.40e-23!101;UBERON:0002405!1.04e-22!115;UBERON:0002204!4.39e-13!167;UBERON:0003081!5.60e-11!216;UBERON:0002384!8.98e-07!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.77e-20,76;UBERON:0002390,1.39e-19,98;UBERON:0003061,1.39e-19,98;UBERON:0001474,5.63e-19,82;UBERON:0002193,9.38e-18,108;UBERON:0004765,2.81e-17,90;UBERON:0002405,1.03e-16,93;UBERON:0001434,1.57e-15,100;UBERON:0003081,2.88e-09,203;UBERON:0002204,3.74e-09,167|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0.726991193897824,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,1.18241114944293,0,0,1.35426486594342,0,0.272906150057846,0.898893937780338,0.612167784741805,0,1.27867425159808,0.659702600373432,0.199463657621632,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,10.985274888221,5.74031609905618,8.38634582033504,0.786300418025466,0.600707571366025,0.803627933485401,6.27028036230747,10.7415005687509,13.3344832248183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7402 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12635 | |||
|TSSclassifier=N | |||
|UniProt=Q5T098 | |||
|association_with_transcript=-410bp_to_ENST00000367525_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_30_at_UTRN_5end | |||
|id=chr6:144980558..144980569,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.86e-63!42;CL:0000860!1.07e-58!45;CL:0002194!6.48e-39!63;CL:0000576!6.48e-39!63;CL:0000040!6.48e-39!63;CL:0000559!6.48e-39!63;CL:0002009!1.70e-37!65;CL:0000766!5.85e-36!76;CL:0000839!2.65e-34!70;CL:0000557!1.02e-33!71;CL:0002393!1.01e-31!9;CL:0002397!1.01e-31!9;CL:0002087!2.25e-23!119;CL:0000738!4.62e-23!140;CL:0000763!6.97e-22!112;CL:0000049!6.97e-22!112;CL:0002031!1.70e-17!124;CL:0000037!4.16e-17!172;CL:0000566!4.16e-17!172;CL:0000988!1.11e-15!182;CL:0002032!2.16e-13!165;CL:0000837!2.16e-13!165;CL:0000875!4.80e-12!3;CL:0002396!4.80e-12!3;CL:0000842!4.33e-11!3;CL:0000224!2.05e-08!4;CL:0002320!3.21e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000875;2.20e-60;3!CL:0002396;2.20e-60;3!CL:0002393;1.77e-30;6!CL:0002397;1.77e-30;6!CL:0000576;8.97e-19;48!CL:0000766;4.63e-12;69!CL:0002087;7.11e-08;104!CL:0000226;7.50e-08;3!CL:0000842;7.50e-08;3!CL:0000763;2.60e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.09e-79,9;CL:0002397,3.09e-79,9;CL:0000875,2.43e-60,3;CL:0002396,2.43e-60,3;CL:0000860,9.50e-38,42;CL:0002057,9.50e-38,42;CL:0000473,5.23e-33,48;CL:0000234,5.23e-33,48;CL:0002194,2.32e-26,59;CL:0000576,2.32e-26,59;CL:0000040,2.32e-26,59;CL:0000559,2.32e-26,59;CL:0002009,1.67e-25,61;CL:0000839,1.40e-23,66;CL:0000557,3.14e-23,67;CL:0000766,1.28e-21,72;CL:0002087,1.17e-16,115;CL:0000763,2.31e-14,108;CL:0000049,2.31e-14,108;CL:0000738,4.83e-14,136;CL:0002031,6.76e-13,120;CL:0000037,2.70e-11,168;CL:0000988,1.07e-10,177;CL:0002032,1.64e-09,161;CL:0000837,1.64e-09,161;CL:0000226,8.29e-08,3;CL:0000842,8.29e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.43e-26;42!CL:0000049;3.19e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.12e-31!102;UBERON:0003061!7.12e-31!102;UBERON:0002193!3.94e-29!112;UBERON:0002371!4.21e-29!80;UBERON:0001474!1.47e-26!86;UBERON:0004765!3.40e-23!101;UBERON:0001434!3.40e-23!101;UBERON:0002405!1.04e-22!115;UBERON:0002204!4.39e-13!167;UBERON:0003081!5.60e-11!216;UBERON:0002384!8.98e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.77e-20,76;UBERON:0002390,1.39e-19,98;UBERON:0003061,1.39e-19,98;UBERON:0001474,5.63e-19,82;UBERON:0002193,9.38e-18,108;UBERON:0004765,2.81e-17,90;UBERON:0002405,1.03e-16,93;UBERON:0001434,1.57e-15,100;UBERON:0003081,2.88e-09,203;UBERON:0002204,3.74e-09,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0,0,0,0.726991193897824,0.377875943688809,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,1.18241114944293,0,0,1.35426486594342,0,0.272906150057846,0.898893937780338,0.612167784741805,0,1.27867425159808,0.659702600373432,0.199463657621632,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0,0,10.985274888221,5.74031609905618,8.38634582033504,0.786300418025466,0.600707571366025,0.803627933485401,6.27028036230747,10.7415005687509,13.3344832248183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.709036767709349,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p30@UTRN | |||
}} |
Revision as of 18:32, 13 September 2013
Short description: | p30@UTRN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_UTRN_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | -410bp_to_ENST00000367525_5end |
EntrezGene: | UTRN |
HGNC: | 12635 |
UniProt: | Q5T098 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.09e-79 | 9 |
CD14-positive, CD16-positive monocyte | 3.09e-79 | 9 |
non-classical monocyte | 2.43e-60 | 3 |
CD14-low, CD16-positive monocyte | 2.43e-60 | 3 |
classical monocyte | 9.50e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.50e-38 | 42 |
defensive cell | 5.23e-33 | 48 |
phagocyte | 5.23e-33 | 48 |
monopoietic cell | 2.32e-26 | 59 |
monocyte | 2.32e-26 | 59 |
monoblast | 2.32e-26 | 59 |
promonocyte | 2.32e-26 | 59 |
macrophage dendritic cell progenitor | 1.67e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.40e-23 | 66 |
granulocyte monocyte progenitor cell | 3.14e-23 | 67 |
myeloid leukocyte | 1.28e-21 | 72 |
nongranular leukocyte | 1.17e-16 | 115 |
myeloid cell | 2.31e-14 | 108 |
common myeloid progenitor | 2.31e-14 | 108 |
leukocyte | 4.83e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 6.76e-13 | 120 |
hematopoietic stem cell | 2.70e-11 | 168 |
hematopoietic cell | 1.07e-10 | 177 |
hematopoietic oligopotent progenitor cell | 1.64e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-09 | 161 |
single nucleate cell | 8.29e-08 | 3 |
mononuclear cell | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.77e-20 | 76 |
hematopoietic system | 1.39e-19 | 98 |
blood island | 1.39e-19 | 98 |
bone element | 5.63e-19 | 82 |
hemolymphoid system | 9.38e-18 | 108 |
skeletal element | 2.81e-17 | 90 |
immune system | 1.03e-16 | 93 |
skeletal system | 1.57e-15 | 100 |
lateral plate mesoderm | 2.88e-09 | 203 |
musculoskeletal system | 3.74e-09 | 167 |
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