FFCP PHASE1:Hg19::chr6:167504549..167504554,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C82|description=CAGE_peak_at_chr6:167504549..167504554,-|id=chr6:167504549..167504554,-|ontology_enrichment_celltype=CL:0002057!5.23e-60!42;CL:0000860!1.01e-55!45;CL:0002009!1.74e-44!65;CL:0000738!1.14e-41!140;CL:0000766!2.32e-41!76;CL:0000557!2.16e-40!71;CL:0002194!6.64e-38!63;CL:0000576!6.64e-38!63;CL:0000040!6.64e-38!63;CL:0000559!6.64e-38!63;CL:0002031!1.73e-35!124;CL:0000839!9.67e-34!70;CL:0000037!5.93e-33!172;CL:0000566!5.93e-33!172;CL:0002032!3.39e-32!165;CL:0000837!3.39e-32!165;CL:0000763!7.31e-32!112;CL:0000049!7.31e-32!112;CL:0002087!1.19e-31!119;CL:0000988!7.49e-31!182;CL:0000767!4.77e-20!3;CL:0000623!7.31e-18!3;CL:0000825!7.31e-18!3;CL:0001014!2.49e-13!2;CL:0001016!2.49e-13!2;CL:0000134!5.93e-13!358;CL:0002320!1.35e-12!365;CL:0000219!2.50e-11!390;CL:0000048!8.22e-10!430;CL:0000723!1.35e-09!436;CL:0000034!2.57e-09!444;CL:0000094!8.19e-08!8;CL:0002393!8.49e-07!9;CL:0002397!8.49e-07!9|ontology_enrichment_celltype_v019=CL:0000767;1.14e-74;3!CL:0000094;1.29e-28;8!CL:0000081;4.81e-21;11!CL:0002393;2.19e-17;6!CL:0002397;2.19e-17;6!CL:0000766;6.16e-09;69!CL:0000860;2.52e-07;33!CL:0002057;2.52e-07;33|ontology_enrichment_celltype_v019_2=CL:0000767,2.14e-74,3;CL:0000094,1.64e-28,8;CL:0000766,1.13e-21,72;CL:0000081,5.70e-21,11;CL:0000860,5.58e-15,42;CL:0002057,5.58e-15,42;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0000473,3.83e-13,48;CL:0000234,3.83e-13,48;CL:0002393,6.16e-12,9;CL:0002397,6.16e-12,9;CL:0000738,1.45e-11,136;CL:0002194,1.45e-10,59;CL:0000576,1.45e-10,59;CL:0000040,1.45e-10,59;CL:0000559,1.45e-10,59;CL:0002009,3.13e-10,61;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000839,1.75e-09,66;CL:0000037,2.31e-09,168;CL:0000557,2.40e-09,67;CL:0000988,6.97e-09,177|ontology_enrichment_development_v019=CL:0002057;8.49e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.18e-35!80;UBERON:0001474!1.26e-32!86;UBERON:0004765!3.85e-27!101;UBERON:0001434!3.85e-27!101;UBERON:0002390!7.84e-27!102;UBERON:0003061!7.84e-27!102;UBERON:0002193!4.82e-24!112;UBERON:0002405!2.67e-23!115;UBERON:0002204!1.24e-14!167;UBERON:0002384!4.18e-12!375;UBERON:0003081!2.89e-10!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.82e-08,76;UBERON:0001474,1.09e-07,82;UBERON:0004765,5.02e-07,90;UBERON:0002405,8.34e-07,93|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.15148819429164,2.32224184974114,0,0,0,0,0,0,1.66198622559563,1.20326668482085,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0.709446689665756,0.689491361473237,1.93645405075148,0,0.188242339542605,0,0.674170453335254,0.612167784741805,0.641858054152187,1.27867425159808,0,0.398927315243264,0.426224750532694,0.580418477257168,0.56738522469114,0,0,0.521482918420201,2.38907729175628,0.605399502633369,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:167504549..167504554,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr6:167504549..167504554,- | |||
|id=chr6:167504549..167504554,- | |||
|ontology_enrichment_celltype=CL:0002057!5.23e-60!42;CL:0000860!1.01e-55!45;CL:0002009!1.74e-44!65;CL:0000738!1.14e-41!140;CL:0000766!2.32e-41!76;CL:0000557!2.16e-40!71;CL:0002194!6.64e-38!63;CL:0000576!6.64e-38!63;CL:0000040!6.64e-38!63;CL:0000559!6.64e-38!63;CL:0002031!1.73e-35!124;CL:0000839!9.67e-34!70;CL:0000037!5.93e-33!172;CL:0000566!5.93e-33!172;CL:0002032!3.39e-32!165;CL:0000837!3.39e-32!165;CL:0000763!7.31e-32!112;CL:0000049!7.31e-32!112;CL:0002087!1.19e-31!119;CL:0000988!7.49e-31!182;CL:0000767!4.77e-20!3;CL:0000623!7.31e-18!3;CL:0000825!7.31e-18!3;CL:0001014!2.49e-13!2;CL:0001016!2.49e-13!2;CL:0000134!5.93e-13!358;CL:0002320!1.35e-12!365;CL:0000219!2.50e-11!390;CL:0000048!8.22e-10!430;CL:0000723!1.35e-09!436;CL:0000034!2.57e-09!444;CL:0000094!8.19e-08!8;CL:0002393!8.49e-07!9;CL:0002397!8.49e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000767;1.14e-74;3!CL:0000094;1.29e-28;8!CL:0000081;4.81e-21;11!CL:0002393;2.19e-17;6!CL:0002397;2.19e-17;6!CL:0000766;6.16e-09;69!CL:0000860;2.52e-07;33!CL:0002057;2.52e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.14e-74,3;CL:0000094,1.64e-28,8;CL:0000766,1.13e-21,72;CL:0000081,5.70e-21,11;CL:0000860,5.58e-15,42;CL:0002057,5.58e-15,42;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0000473,3.83e-13,48;CL:0000234,3.83e-13,48;CL:0002393,6.16e-12,9;CL:0002397,6.16e-12,9;CL:0000738,1.45e-11,136;CL:0002194,1.45e-10,59;CL:0000576,1.45e-10,59;CL:0000040,1.45e-10,59;CL:0000559,1.45e-10,59;CL:0002009,3.13e-10,61;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000839,1.75e-09,66;CL:0000037,2.31e-09,168;CL:0000557,2.40e-09,67;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.49e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.18e-35!80;UBERON:0001474!1.26e-32!86;UBERON:0004765!3.85e-27!101;UBERON:0001434!3.85e-27!101;UBERON:0002390!7.84e-27!102;UBERON:0003061!7.84e-27!102;UBERON:0002193!4.82e-24!112;UBERON:0002405!2.67e-23!115;UBERON:0002204!1.24e-14!167;UBERON:0002384!4.18e-12!375;UBERON:0003081!2.89e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.82e-08,76;UBERON:0001474,1.09e-07,82;UBERON:0004765,5.02e-07,90;UBERON:0002405,8.34e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.15148819429164,2.32224184974114,0,0,0,0,0,0,1.66198622559563,1.20326668482085,0.434021741431704,0,0,0,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0.709446689665756,0.689491361473237,1.93645405075148,0,0.188242339542605,0,0.674170453335254,0.612167784741805,0.641858054152187,1.27867425159808,0,0.398927315243264,0.426224750532694,0.580418477257168,0.56738522469114,0,0,0.521482918420201,2.38907729175628,0.605399502633369,0,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:167504549..167504554,- | |||
}} |
Revision as of 19:22, 13 September 2013
Short description: | p@chr6:167504549..167504554, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:167504549..167504554, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.14e-74 | 3 |
granulocyte | 1.64e-28 | 8 |
myeloid leukocyte | 1.13e-21 | 72 |
blood cell | 5.70e-21 | 11 |
classical monocyte | 5.58e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.58e-15 | 42 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
defensive cell | 3.83e-13 | 48 |
phagocyte | 3.83e-13 | 48 |
intermediate monocyte | 6.16e-12 | 9 |
CD14-positive, CD16-positive monocyte | 6.16e-12 | 9 |
leukocyte | 1.45e-11 | 136 |
monopoietic cell | 1.45e-10 | 59 |
monocyte | 1.45e-10 | 59 |
monoblast | 1.45e-10 | 59 |
promonocyte | 1.45e-10 | 59 |
macrophage dendritic cell progenitor | 3.13e-10 | 61 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
myeloid lineage restricted progenitor cell | 1.75e-09 | 66 |
hematopoietic stem cell | 2.31e-09 | 168 |
granulocyte monocyte progenitor cell | 2.40e-09 | 67 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.82e-08 | 76 |
bone element | 1.09e-07 | 82 |
skeletal element | 5.02e-07 | 90 |
immune system | 8.34e-07 | 93 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.