FFCP PHASE1:Mm9::chr1:188528390..188528462,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:188528390..188528462,-|id=chr1:188528390..188528462,-|ontology_enrichment_celltype=CL:0000393!3.42e-08!39;CL:0000211!3.42e-08!39;CL:0000107!1.39e-07!9;CL:0000540!8.33e-07!33;CL:0000047!8.33e-07!33;CL:0000031!8.33e-07!33;CL:0000404!8.33e-07!33|ontology_enrichment_celltype_v019_2=CL:0000107,6.74e-08,9;CL:0000393,8.30e-08,39;CL:0000211,8.30e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.09e-08!102;UBERON:0000924!2.09e-08!102;UBERON:0006601!2.09e-08!102;UBERON:0001017!5.44e-08!73;UBERON:0005743!5.44e-08!73;UBERON:0002410!1.39e-07!9;UBERON:0000073!2.48e-07!75;UBERON:0001016!2.48e-07!75;UBERON:0004535!3.78e-07!23;UBERON:0001009!3.78e-07!23;UBERON:0007100!5.21e-07!18;UBERON:0000948!5.21e-07!18;UBERON:0005498!5.21e-07!18;UBERON:0004140!5.21e-07!18;UBERON:0009881!5.21e-07!18;UBERON:0004141!5.21e-07!18;UBERON:0003084!5.21e-07!18;UBERON:0007005!5.21e-07!18;UBERON:0004139!5.21e-07!18;UBERON:0004291!5.21e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.78e-10,92;UBERON:0004121,3.95e-09,95;UBERON:0000924,3.95e-09,95;UBERON:0006601,3.95e-09,95;UBERON:0002410,6.74e-08,9;UBERON:0005157,1.12e-07,20;UBERON:0001017,1.47e-07,73;UBERON:0004535,1.92e-07,23;UBERON:0001009,1.92e-07,23;UBERON:0007100,2.70e-07,18;UBERON:0000948,2.70e-07,18;UBERON:0005498,2.70e-07,18;UBERON:0004140,2.70e-07,18;UBERON:0009881,2.70e-07,18;UBERON:0004141,2.70e-07,18;UBERON:0003084,2.70e-07,18;UBERON:0007005,2.70e-07,18;UBERON:0004139,2.70e-07,18;UBERON:0004291,2.70e-07,18;UBERON:0002048,5.75e-07,14;UBERON:0000117,5.75e-07,14;UBERON:0000171,5.75e-07,14;UBERON:0000170,5.75e-07,14;UBERON:0005597,5.75e-07,14;UBERON:0000118,5.75e-07,14;UBERON:0001016,8.18e-07,75|phase1_expression=4.96461426024861,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.02051948181284,0.794327609607082,3.13439746966722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,2.63580021170738,2.20256102594018,0,3.70642765846759,2.85592037554813,3.30530828426282,3.91961980551015,2.87505128729943,0,0,0,4.88792928468299,5.73066879877513,5.67239301505187,1.61853168687678,3.1739458756322,1.26766280701236,1.0165335962074,0.889294796111139,0.449949858640699,0,0,1.49800055259202,0.768436610643109,1.8664130215526,2.02508907497536,1.68259969081106,4.85606673486466,3.75476519617743,0.979926393719632,0.670918297127655,0.919218786610021,3.30347642998166,6.51205424234457,4.91540906419979,1.58263545276233,1.28082701043374,2.6045668527838,2.23346399201105,1.68828783009504,3.36156145108982,5.89257170947335,7.40332740155335,4.10078780815661,0.075726193333184,0.453429360640713,5.50742528533188,0,0,0,0,0,1.12355536105401,4.94247935476367,4.41636207824877,4.24007489412408,2.53518155598025,3.84979432242953,5.09610479413291,0,0.649473123033642,0,0.505524445014783,0.68510327831436,0.517875767294343,0.148442139064825,1.73485326766136,1.21786191324856,0.230615497256059,0.753613202763113,1.64624189989987,0.125666591329675,2.22475470960936,1.59059292611903,1.76922110389975,4.69123864847487,2.65009822152472,1.45462575940567,0,2.63502717310392,3.14170060220183,0.766371165625774,0,0,0,1.79748767285787,4.11750542536764,1.7591609295801,2.25971616249959,0.767146371990992,3.32460871295296,2.92034273521964,4.9901288286655,1.8661045591514,2.0217820674694,0.631325567659422,7.93734702072493,6.66716102857071,6.48223667299257,6.48030716693575,5.8511389270142,8.83984669965463,5.99691037182265,3.62184719034622,2.15567992932842,4.16033376369202,3.69497360744293,3.72632745126877,3.61461423993277,3.48252166522167,4.32142486456681,4.97585667046233,0,0,0,6.00664740352955,6.80125573945179,6.12211008967451,8.04932100989715,8.06733350164356,6.63348585415727,7.20855228726264,5.90201483079162,4.55384835231961,3.78487654801005,2.95501435342371,2.26992666728396,2.63159977365598,1.75640092232841,2.68412837520744,10.5144974282064,4.73361216944708,0,0,4.69234151177515,3.94802342162745,1.80414445850931,1.00841762311671,0.22237804384487,1.52180500890047,0,0.329397909448022,0.251335208800269,0.994782360205754,0.974820435595601,0,0.432276099749388,0.199141273254367,2.27601481143698,2.62771579002376,0,2.03651327845314,3.87904974335251,2.87556861550306,2.90888070771584,0.885660887877613,1.41298855057237,0.740382983530803,0,0.333690211432188,0.589676985339609,0.449724224769707,0.405720242777006,0,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0.358794827043824,0.482443521363367,2.40179147216586,4.54779388249163,5.37784422258685,5.60158783058121,7.51008794523207,7.03526281255626,6.66522194480839,4.09780660501378,8.51229778173431,7.0868700687608,4.46473352240964,4.58817281204066,5.35323443784276,2.74833211304872,0,0,2.45882136509518,2.48343071674259,3.21101179975584,2.57865710502847,1.80328439914343,4.29200576247434,9.14973836307144,9.76096860741596,15.9413314322271,17.2057534525837,16.9326992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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:188528390..188528462,- | |||
|id=chr1:188528390..188528462,- | |||
|ontology_enrichment_celltype=CL:0000393!3.42e-08!39;CL:0000211!3.42e-08!39;CL:0000107!1.39e-07!9;CL:0000540!8.33e-07!33;CL:0000047!8.33e-07!33;CL:0000031!8.33e-07!33;CL:0000404!8.33e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,6.74e-08,9;CL:0000393,8.30e-08,39;CL:0000211,8.30e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.09e-08!102;UBERON:0000924!2.09e-08!102;UBERON:0006601!2.09e-08!102;UBERON:0001017!5.44e-08!73;UBERON:0005743!5.44e-08!73;UBERON:0002410!1.39e-07!9;UBERON:0000073!2.48e-07!75;UBERON:0001016!2.48e-07!75;UBERON:0004535!3.78e-07!23;UBERON:0001009!3.78e-07!23;UBERON:0007100!5.21e-07!18;UBERON:0000948!5.21e-07!18;UBERON:0005498!5.21e-07!18;UBERON:0004140!5.21e-07!18;UBERON:0009881!5.21e-07!18;UBERON:0004141!5.21e-07!18;UBERON:0003084!5.21e-07!18;UBERON:0007005!5.21e-07!18;UBERON:0004139!5.21e-07!18;UBERON:0004291!5.21e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.78e-10,92;UBERON:0004121,3.95e-09,95;UBERON:0000924,3.95e-09,95;UBERON:0006601,3.95e-09,95;UBERON:0002410,6.74e-08,9;UBERON:0005157,1.12e-07,20;UBERON:0001017,1.47e-07,73;UBERON:0004535,1.92e-07,23;UBERON:0001009,1.92e-07,23;UBERON:0007100,2.70e-07,18;UBERON:0000948,2.70e-07,18;UBERON:0005498,2.70e-07,18;UBERON:0004140,2.70e-07,18;UBERON:0009881,2.70e-07,18;UBERON:0004141,2.70e-07,18;UBERON:0003084,2.70e-07,18;UBERON:0007005,2.70e-07,18;UBERON:0004139,2.70e-07,18;UBERON:0004291,2.70e-07,18;UBERON:0002048,5.75e-07,14;UBERON:0000117,5.75e-07,14;UBERON:0000171,5.75e-07,14;UBERON:0000170,5.75e-07,14;UBERON:0005597,5.75e-07,14;UBERON:0000118,5.75e-07,14;UBERON:0001016,8.18e-07,75 | |||
|phase1_expression=4.96461426024861,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.02051948181284,0.794327609607082,3.13439746966722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52511090331616,2.63580021170738,2.20256102594018,0,3.70642765846759,2.85592037554813,3.30530828426282,3.91961980551015,2.87505128729943,0,0,0,4.88792928468299,5.73066879877513,5.67239301505187,1.61853168687678,3.1739458756322,1.26766280701236,1.0165335962074,0.889294796111139,0.449949858640699,0,0,1.49800055259202,0.768436610643109,1.8664130215526,2.02508907497536,1.68259969081106,4.85606673486466,3.75476519617743,0.979926393719632,0.670918297127655,0.919218786610021,3.30347642998166,6.51205424234457,4.91540906419979,1.58263545276233,1.28082701043374,2.6045668527838,2.23346399201105,1.68828783009504,3.36156145108982,5.89257170947335,7.40332740155335,4.10078780815661,0.075726193333184,0.453429360640713,5.50742528533188,0,0,0,0,0,1.12355536105401,4.94247935476367,4.41636207824877,4.24007489412408,2.53518155598025,3.84979432242953,5.09610479413291,0,0.649473123033642,0,0.505524445014783,0.68510327831436,0.517875767294343,0.148442139064825,1.73485326766136,1.21786191324856,0.230615497256059,0.753613202763113,1.64624189989987,0.125666591329675,2.22475470960936,1.59059292611903,1.76922110389975,4.69123864847487,2.65009822152472,1.45462575940567,0,2.63502717310392,3.14170060220183,0.766371165625774,0,0,0,1.79748767285787,4.11750542536764,1.7591609295801,2.25971616249959,0.767146371990992,3.32460871295296,2.92034273521964,4.9901288286655,1.8661045591514,2.0217820674694,0.631325567659422,7.93734702072493,6.66716102857071,6.48223667299257,6.48030716693575,5.8511389270142,8.83984669965463,5.99691037182265,3.62184719034622,2.15567992932842,4.16033376369202,3.69497360744293,3.72632745126877,3.61461423993277,3.48252166522167,4.32142486456681,4.97585667046233,0,0,0,6.00664740352955,6.80125573945179,6.12211008967451,8.04932100989715,8.06733350164356,6.63348585415727,7.20855228726264,5.90201483079162,4.55384835231961,3.78487654801005,2.95501435342371,2.26992666728396,2.63159977365598,1.75640092232841,2.68412837520744,10.5144974282064,4.73361216944708,0,0,4.69234151177515,3.94802342162745,1.80414445850931,1.00841762311671,0.22237804384487,1.52180500890047,0,0.329397909448022,0.251335208800269,0.994782360205754,0.974820435595601,0,0.432276099749388,0.199141273254367,2.27601481143698,2.62771579002376,0,2.03651327845314,3.87904974335251,2.87556861550306,2.90888070771584,0.885660887877613,1.41298855057237,0.740382983530803,0,0.333690211432188,0.589676985339609,0.449724224769707,0.405720242777006,0,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0.358794827043824,0.482443521363367,2.40179147216586,4.54779388249163,5.37784422258685,5.60158783058121,7.51008794523207,7.03526281255626,6.66522194480839,4.09780660501378,8.51229778173431,7.0868700687608,4.46473352240964,4.58817281204066,5.35323443784276,2.74833211304872,0,0,2.45882136509518,2.48343071674259,3.21101179975584,2.57865710502847,1.80328439914343,4.29200576247434,9.14973836307144,9.76096860741596,15.9413314322271,17.2057534525837,16.932699230262,16.7015153165411,10.9298889452221,10.5212108848072,10.2774822266096,1.60660658210904,1.70328102249922,2.84904965867608,4.39794790254655,3.29940245945071,2.65490276679926,2.18502572539483,1.51161778482376,0.943025398779491,1.77181135728464,1.84461088766356,2.58428293168221,1.45413491791002,2.49548164869305,1.8962205476149,3.16255825724996,1.03135543248187,0.340439605753788,5.94201610303324,2.58717367565509,6.21577401591618,3.01478397191865,2.67553226403106,2.63278432963394,1.522324745573,1.87737366450968,0,0.882113592219848,1.31909002353184,2.58343082713449,1.68876189798836,0.835606408021955,1.31312719796049,0,2.78137953015765,0.512612642393558,0.82554747185289,0.555583582109135,0.188368457004691,0.27338845544205,0,0,0,0,0,5.69404788446044,3.04979200690273,2.70013352054503,2.09088296014469,1.09181281873089,0.944050424693745,1.98368293740806,0.523511883968059,0.648074866458964,3.10669656543463,0,4.63501292736334,2.97825282822776,2.91676782516071,2.84151611651008,2.70329800785245,4.22486059124714,1.0416350787516,0.524296722128554,0,0.576060012515731,0.316011120628178,1.01362607645082,1.02710957164827,0.51968329191118,0.895133478337407,0.993406773906324,0.120195449519969,0.295379054349154,0.605798699688886,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0.467507608726276,2.26730383615211,0.221985953374065,0,0.335769232728157,2.12508553435409,9.3841237725591,2.19781949120718,3.00115730710692,1.50471631210609,2.25900737046827,2.76195141904306,4.01026859407578,1.54667864109319,2.05524755931193,0.755393897389701,2.02506750069542,1.35096360967266,0,3.10656187051092,1.86817225651518,4.78829848081237,2.39027048055788,3.40349403895612,2.09613162627982,1.83843508450014,2.22246727801615,2.06035057238894,3.20919209591815,3.28506375292937,5.32306529769503,2.640768779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| |||
|short_description=p@chr1:188528390..188528462,- | |||
}} |
Revision as of 20:01, 13 September 2013
Short description: | p@chr1:188528390..188528462, - |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:188528390..188528462, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 6.74e-08 | 9 |
electrically responsive cell | 8.30e-08 | 39 |
electrically active cell | 8.30e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.78e-10 | 92 |
ectoderm-derived structure | 3.95e-09 | 95 |
ectoderm | 3.95e-09 | 95 |
presumptive ectoderm | 3.95e-09 | 95 |
autonomic nervous system | 6.74e-08 | 9 |
epithelial fold | 1.12e-07 | 20 |
central nervous system | 1.47e-07 | 73 |
cardiovascular system | 1.92e-07 | 23 |
circulatory system | 1.92e-07 | 23 |
primary circulatory organ | 2.70e-07 | 18 |
heart | 2.70e-07 | 18 |
primitive heart tube | 2.70e-07 | 18 |
primary heart field | 2.70e-07 | 18 |
anterior lateral plate mesoderm | 2.70e-07 | 18 |
heart tube | 2.70e-07 | 18 |
heart primordium | 2.70e-07 | 18 |
cardiac mesoderm | 2.70e-07 | 18 |
cardiogenic plate | 2.70e-07 | 18 |
heart rudiment | 2.70e-07 | 18 |
lung | 5.75e-07 | 14 |
respiratory tube | 5.75e-07 | 14 |
respiration organ | 5.75e-07 | 14 |
pair of lungs | 5.75e-07 | 14 |
lung primordium | 5.75e-07 | 14 |
lung bud | 5.75e-07 | 14 |
nervous system | 8.18e-07 | 75 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.