FFCP PHASE1:Hg19::chr6:7541814..7541825,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1832|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3052|TSSclassifier=S|UniProt=P15924|association_with_transcript=6bp_to_ENST00000379802_5end|coexpression_cluster_id=C4626|description=CAGE_peak_7_at_DSP_5end|id=chr6:7541814..7541825,+|ontology_enrichment_celltype=CL:0000066!2.41e-39!254;CL:0000223!6.02e-19!59;CL:0002076!3.92e-16!43;CL:0002251!1.20e-08!21|ontology_enrichment_celltype_v019=CL:0002076;1.85e-15;42!CL:0002251;1.92e-11;20!CL:0000039;1.78e-07;7!CL:0000586;1.78e-07;7!CL:0002368;5.78e-07;13|ontology_enrichment_celltype_v019_2=CL:0000066,6.75e-44,253;CL:0000223,6.84e-24,58;CL:0002076,8.82e-21,42;CL:0002251,9.64e-12,20;CL:0000039,2.25e-07,7;CL:0000586,2.25e-07,7;CL:0002368,6.22e-07,13|ontology_enrichment_development_v019=CL:0000223;2.55e-12;58!UBERON:0003104;2.64e-07;31!UBERON:0001041;4.79e-07;30|ontology_enrichment_disease=DOID:305!8.12e-27!106;DOID:0050687!1.51e-19!143;DOID:299!7.87e-09!25;DOID:162!2.48e-08!235;DOID:14566!1.53e-07!239|ontology_enrichment_disease_v019=DOID:299;9.17e-10;25!DOID:305;1.97e-09;106!DOID:1749;3.22e-07;14|ontology_enrichment_disease_v019_2=DOID:305,3.48e-29,106;DOID:0050687,7.43e-20,143;DOID:299,3.16e-10,25;DOID:162,3.52e-09,235;DOID:14566,2.05e-08,239;DOID:1749,1.73e-07,14|ontology_enrichment_uberon=UBERON:0004119!7.21e-19!169;UBERON:0000925!7.21e-19!169;UBERON:0006595!7.21e-19!169;UBERON:0001007!1.73e-14!155;UBERON:0001555!1.73e-14!155;UBERON:0007026!1.73e-14!155;UBERON:0004921!3.60e-13!129;UBERON:0004185!3.60e-13!129;UBERON:0000077!6.56e-13!130;UBERON:0000466!8.07e-12!126;UBERON:0000062!1.58e-11!511;UBERON:0001041!8.10e-11!98;UBERON:0001004!1.20e-10!72;UBERON:0009569!2.92e-10!113;UBERON:0000064!3.11e-10!219;UBERON:0005911!4.13e-10!82;UBERON:0000464!1.39e-09!104;UBERON:0000468!5.18e-09!659;UBERON:0001048!8.33e-09!168;UBERON:0000481!2.47e-08!347;UBERON:0000065!3.04e-08!53;UBERON:0000475!4.95e-08!365;UBERON:0005177!5.70e-08!107;UBERON:0003104!1.25e-07!238;UBERON:0009142!1.25e-07!238;UBERON:0002530!3.44e-07!59;UBERON:0008947!4.96e-07!38;UBERON:0003258!4.96e-07!38|ontology_enrichment_uberon_v019=UBERON:0002365;7.32e-08;31!UBERON:0002330;7.32e-08;31!UBERON:0000065;2.54e-07;44!UBERON:0004921;6.48e-07;33!UBERON:0006554;8.58e-07;30!UBERON:0001008;8.58e-07;30|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.06e-22,160;UBERON:0000925,1.06e-22,160;UBERON:0006595,1.06e-22,160;UBERON:0001007,8.02e-18,145;UBERON:0001555,8.02e-18,145;UBERON:0007026,8.02e-18,145;UBERON:0004921,2.97e-16,118;UBERON:0001041,9.17e-14,87;UBERON:0005911,3.09e-12,82;UBERON:0001004,7.62e-12,74;UBERON:0009569,1.31e-10,112;UBERON:0005177,1.13e-09,101;UBERON:0000065,2.09e-09,54;UBERON:0001048,6.90e-09,160;UBERON:0002530,6.97e-09,59;UBERON:0006554,1.40e-08,47;UBERON:0001008,3.44e-08,48;UBERON:0008947,4.64e-08,38;UBERON:0003258,4.64e-08,38;UBERON:0002365,6.55e-08,31;UBERON:0002330,6.55e-08,31;UBERON:0005631,1.26e-07,14;UBERON:0000158,1.26e-07,14;UBERON:0003929,2.56e-07,54|phase1_expression=3.08853244759946,1.49870366723688,1.12763523276777,0,0.893922188854576,0.872338524100369,0,0,0,0,2.09340350391728,1.96597234917155,2.37390280405608,0,0,0,0,0,0,0,0,0,1.14494394852423,0.136874425072884,0.251085279189606,0,0,0,0,0,0,7.35536979583142,5.72291245678675,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.661743720148475,0.221729397462564,0.790513071238134,0.654895377488563,3.27865759463288,4.82019775619758,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0.760272105718513,2.68468263302986,0,0,0.0892997282840798,0,0,0,0,0,0,0,6.54141078213801,0.993943903390637,0.12663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0,1.06748995729705,4.68668341992604,0,0,0,0.454072282934794,1.72852777344,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,1.22595118319608,1.05166641234618,0.340296549480063,2.51145489964407,0.640672166455702,0.635795703478686,3.60109315301283,0.206105058476878,2.57640540045629,1.48893485065272,2.53164498361899,0.779496041289589,4.79624171063818,0.552299391853796,0.323292113637624,1.77504796258307,1.10827308050404,0.508681776931463,7.53717327336858,7.36414525595254,6.59650569394709,2.43947412259191,1.45782745153634,1.85910308591229,2.798848485415,2.77552935963191,2.91981887260664,0,0.643240938192885,0,0,0,2.48444280083672,2.86593973132773,2.6511213287183,1.32352767278873,2.39667388501647,2.60997681022206,2.96628877952362,2.15843611637881,1.92373578473195,0,1.40241773803446,0,0,1.26755034821831,1.96565443335525,2.36315962672562,0,5.28850285735388,1.02940686179115,9.21902397432455,8.99214026060957,5.12697759299317,9.0736676255359,0,0,1.44331342025273,0.34779121492523,2.11335649624479,0.577465791044295,0,0.380508304469197,4.74122638775565,2.57545848628462,0,0.234004265139238,0.29726232457745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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1832 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3052 | |||
|TSSclassifier=S | |||
|UniProt=P15924 | |||
|association_with_transcript=6bp_to_ENST00000379802_5end | |||
|coexpression_cluster_id=C4626 | |||
|description=CAGE_peak_7_at_DSP_5end | |||
|id=chr6:7541814..7541825,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.41e-39!254;CL:0000223!6.02e-19!59;CL:0002076!3.92e-16!43;CL:0002251!1.20e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.85e-15;42!CL:0002251;1.92e-11;20!CL:0000039;1.78e-07;7!CL:0000586;1.78e-07;7!CL:0002368;5.78e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.75e-44,253;CL:0000223,6.84e-24,58;CL:0002076,8.82e-21,42;CL:0002251,9.64e-12,20;CL:0000039,2.25e-07,7;CL:0000586,2.25e-07,7;CL:0002368,6.22e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;2.55e-12;58!UBERON:0003104;2.64e-07;31!UBERON:0001041;4.79e-07;30 | |||
|ontology_enrichment_disease=DOID:305!8.12e-27!106;DOID:0050687!1.51e-19!143;DOID:299!7.87e-09!25;DOID:162!2.48e-08!235;DOID:14566!1.53e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:299;9.17e-10;25!DOID:305;1.97e-09;106!DOID:1749;3.22e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.48e-29,106;DOID:0050687,7.43e-20,143;DOID:299,3.16e-10,25;DOID:162,3.52e-09,235;DOID:14566,2.05e-08,239;DOID:1749,1.73e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.21e-19!169;UBERON:0000925!7.21e-19!169;UBERON:0006595!7.21e-19!169;UBERON:0001007!1.73e-14!155;UBERON:0001555!1.73e-14!155;UBERON:0007026!1.73e-14!155;UBERON:0004921!3.60e-13!129;UBERON:0004185!3.60e-13!129;UBERON:0000077!6.56e-13!130;UBERON:0000466!8.07e-12!126;UBERON:0000062!1.58e-11!511;UBERON:0001041!8.10e-11!98;UBERON:0001004!1.20e-10!72;UBERON:0009569!2.92e-10!113;UBERON:0000064!3.11e-10!219;UBERON:0005911!4.13e-10!82;UBERON:0000464!1.39e-09!104;UBERON:0000468!5.18e-09!659;UBERON:0001048!8.33e-09!168;UBERON:0000481!2.47e-08!347;UBERON:0000065!3.04e-08!53;UBERON:0000475!4.95e-08!365;UBERON:0005177!5.70e-08!107;UBERON:0003104!1.25e-07!238;UBERON:0009142!1.25e-07!238;UBERON:0002530!3.44e-07!59;UBERON:0008947!4.96e-07!38;UBERON:0003258!4.96e-07!38 | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;7.32e-08;31!UBERON:0002330;7.32e-08;31!UBERON:0000065;2.54e-07;44!UBERON:0004921;6.48e-07;33!UBERON:0006554;8.58e-07;30!UBERON:0001008;8.58e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.06e-22,160;UBERON:0000925,1.06e-22,160;UBERON:0006595,1.06e-22,160;UBERON:0001007,8.02e-18,145;UBERON:0001555,8.02e-18,145;UBERON:0007026,8.02e-18,145;UBERON:0004921,2.97e-16,118;UBERON:0001041,9.17e-14,87;UBERON:0005911,3.09e-12,82;UBERON:0001004,7.62e-12,74;UBERON:0009569,1.31e-10,112;UBERON:0005177,1.13e-09,101;UBERON:0000065,2.09e-09,54;UBERON:0001048,6.90e-09,160;UBERON:0002530,6.97e-09,59;UBERON:0006554,1.40e-08,47;UBERON:0001008,3.44e-08,48;UBERON:0008947,4.64e-08,38;UBERON:0003258,4.64e-08,38;UBERON:0002365,6.55e-08,31;UBERON:0002330,6.55e-08,31;UBERON:0005631,1.26e-07,14;UBERON:0000158,1.26e-07,14;UBERON:0003929,2.56e-07,54 | |||
|phase1_expression=3.08853244759946,1.49870366723688,1.12763523276777,0,0.893922188854576,0.872338524100369,0,0,0,0,2.09340350391728,1.96597234917155,2.37390280405608,0,0,0,0,0,0,0,0,0,1.14494394852423,0.136874425072884,0.251085279189606,0,0,0,0,0,0,7.35536979583142,5.72291245678675,4.06729411183466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.661743720148475,0.221729397462564,0.790513071238134,0.654895377488563,3.27865759463288,4.82019775619758,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0.760272105718513,2.68468263302986,0,0,0.0892997282840798,0,0,0,0,0,0,0,6.54141078213801,0.993943903390637,0.12663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0,1.06748995729705,4.68668341992604,0,0,0,0.454072282934794,1.72852777344,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,1.22595118319608,1.05166641234618,0.340296549480063,2.51145489964407,0.640672166455702,0.635795703478686,3.60109315301283,0.206105058476878,2.57640540045629,1.48893485065272,2.53164498361899,0.779496041289589,4.79624171063818,0.552299391853796,0.323292113637624,1.77504796258307,1.10827308050404,0.508681776931463,7.53717327336858,7.36414525595254,6.59650569394709,2.43947412259191,1.45782745153634,1.85910308591229,2.798848485415,2.77552935963191,2.91981887260664,0,0.643240938192885,0,0,0,2.48444280083672,2.86593973132773,2.6511213287183,1.32352767278873,2.39667388501647,2.60997681022206,2.96628877952362,2.15843611637881,1.92373578473195,0,1.40241773803446,0,0,1.26755034821831,1.96565443335525,2.36315962672562,0,5.28850285735388,1.02940686179115,9.21902397432455,8.99214026060957,5.12697759299317,9.0736676255359,0,0,1.44331342025273,0.34779121492523,2.11335649624479,0.577465791044295,0,0.380508304469197,4.74122638775565,2.57545848628462,0,0.234004265139238,0.297262324577456,1.87467667973554,7.22323151255096,5.67100388969546,4.74660170325096,6.68458058582112,5.36735750831296,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0.285826432630578,0.224262168690721,0.43596006883328,0.66004457238855,1.16344544182,0,0,1.59562869950922,2.08014873822732,0,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,0,0.799783929456456,0,0,0,7.18874566474748,4.59447743336456,1.42636905040718,1.15825045334063,0.205476322550383,1.43248770591916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53550464602372,2.67643483195743,3.78485796081443,2.6942525448324,0.601892199455438,0,1.03473071292505,3.32112799267718,1.47495334833363,0,0.195801157462741,0,0,0,0.106727557803444,2.72814814301633,3.32870879020994,1.81434175997808,1.73675465473144,12.5838818096211,2.80660094433074,0.640695746278505,2.04682899626681,3.69964018630297,1.48418066444991,0,1.06537035187876,0.0821271560138091,0.519254429183621,0.348631135379878,5.31781578203138,5.21316822788541,4.9723734025384,0,0,0,2.70719767744447,5.69913494572669,4.70609861506113,0,4.11651352682215,1.13733384070897,0,1.0795795805107,1.54227252690289,1.35473218771926,0.501689773854853,2.54876273045038,3.3243040357149,1.56712328305525,0,0,1.02580050046556,0.656029291399411,0.650756789328606,2.98818933778395,0,0,6.89118645595407,6.50060246036521,0,0.580024309752732,0,0,0.551346289938122,0.107420244868274,0,0,0.534192213880424,4.46269271474641,9.99388350298552,10.2090169995667,8.49725359186619,0,0.62962469366128,0,0,0.532306030317022,0,0.37064843820784,0.572499546967965,0,0.632758849437452,0,0,0,0,0.78494864019923,0,0,0,0.404364963146632,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0.551365343546124,0,0.438450885253763,0,0,0.608731130888112,0,0.563391205064483,0.430234056612155,0.0982490410131212,0.35667105148125,0,0,0,0,0,4.04132873447151,3.35151137767894,5.44454924306613,4.0481834334015,2.58303223602738,8.42357378338128,5.32116184244011,9.18893600827838,0,0,0,0,0,0,0,0,7.69133312117807,0.962479855263359,8.82144777531714,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49712432326576,0,0,0,0.568272293612826,5.96861211844225,3.26661148915902,7.6790175524808,0,0.984685914873589,0,0,0,0,1.10513566212459,17.8872250976536,2.35217969754956,0,4.0435146396035,2.87578723671446,1.25314822272926,0,0.690503839458535,0,4.44547960578548,0,0.278304294485554,0,11.9796770099207,1.31189999994294,0.724999575434793,1.93448862085349,2.54253650292766,6.61885508950222,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0.762569244632931,4.60098356119391,0.923403102045565,0,22.5952626300299,21.0930464362965,21.8381217563236,4.14701507651495,2.47313502185028,5.33034776018635,0,0,0,0,0,0,0,0,3.16497096792041,2.61172493054636,5.93682900022551,4.11138415509973,0.995261931078505,2.12298154808014,4.27721101453538,0,0,0,0.202203398942031,0,0,0,3.52196314077761,0.728341138602278,0.394584402849391,3.62972148145992,0.30607276163049,0.442306057399416,2.1045278718029,2.17745201934219,0,0,0.313932918407225,0,3.13070500632772,0,3.47119476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| |||
|short_description=p7@DSP | |||
}} |
Revision as of 21:49, 13 September 2013
Short description: | p7@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_DSP_5end |
Coexpression cluster: | C4626_salivary_amniotic_choriocarcinoma_Keratinocyte_maxillary_cervical_esophagus |
Association with transcript: | 6bp_to_ENST00000379802_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.75e-44 | 253 |
endodermal cell | 6.84e-24 | 58 |
endo-epithelial cell | 8.82e-21 | 42 |
epithelial cell of alimentary canal | 9.64e-12 | 20 |
germ line cell | 2.25e-07 | 7 |
germ cell | 2.25e-07 | 7 |
respiratory epithelial cell | 6.22e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.06e-22 | 160 |
endoderm | 1.06e-22 | 160 |
presumptive endoderm | 1.06e-22 | 160 |
digestive system | 8.02e-18 | 145 |
digestive tract | 8.02e-18 | 145 |
primitive gut | 8.02e-18 | 145 |
subdivision of digestive tract | 2.97e-16 | 118 |
foregut | 9.17e-14 | 87 |
endo-epithelium | 3.09e-12 | 82 |
respiratory system | 7.62e-12 | 74 |
subdivision of trunk | 1.31e-10 | 112 |
trunk region element | 1.13e-09 | 101 |
respiratory tract | 2.09e-09 | 54 |
primordium | 6.90e-09 | 160 |
gland | 6.97e-09 | 59 |
urinary system structure | 1.40e-08 | 47 |
renal system | 3.44e-08 | 48 |
respiratory primordium | 4.64e-08 | 38 |
endoderm of foregut | 4.64e-08 | 38 |
exocrine gland | 6.55e-08 | 31 |
exocrine system | 6.55e-08 | 31 |
extraembryonic membrane | 1.26e-07 | 14 |
membranous layer | 1.26e-07 | 14 |
gut epithelium | 2.56e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.48e-29 | 106 |
cell type cancer | 7.43e-20 | 143 |
adenocarcinoma | 3.16e-10 | 25 |
cancer | 3.52e-09 | 235 |
disease of cellular proliferation | 2.05e-08 | 239 |
squamous cell carcinoma | 1.73e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.