FFCP PHASE1:Mm9::chr2:125861661..125861676,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3307|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:125861661..125861676,+|id=chr2:125861661..125861676,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.28e-10,3;CL:0000359,1.28e-10,3;CL:0002539,1.28e-10,3;CL:0000514,1.28e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!3.01e-09!17;UBERON:0002048!1.06e-07!14;UBERON:0000117!1.06e-07!14;UBERON:0000171!1.06e-07!14;UBERON:0000170!1.06e-07!14;UBERON:0005597!1.06e-07!14;UBERON:0000118!1.06e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.28e-10,3;UBERON:0004237,1.28e-10,3;UBERON:0004695,1.28e-10,3;UBERON:0002111,1.28e-10,3;UBERON:0004178,1.28e-10,3;UBERON:0002048,9.85e-10,14;UBERON:0000117,9.85e-10,14;UBERON:0000171,9.85e-10,14;UBERON:0000170,9.85e-10,14;UBERON:0005597,9.85e-10,14;UBERON:0000118,9.85e-10,14;UBERON:0000947,4.68e-08,4;UBERON:0001637,4.68e-08,4;UBERON:0004573,4.68e-08,4;UBERON:0003509,4.68e-08,4;UBERON:0004571,4.68e-08,4;UBERON:0010191,4.68e-08,4;UBERON:0004572,4.68e-08,4;UBERON:0005153,7.50e-08,17;UBERON:0005178,7.50e-08,17;UBERON:0005181,7.50e-08,17;UBERON:0002224,7.50e-08,17;UBERON:0000915,7.50e-08,17;UBERON:0008947,7.50e-08,17;UBERON:0003258,7.50e-08,17|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.06457089424156,9.0225468785368,5.87349606917381,0,0,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,0,0,0,1.69422266034566,0,1.3498495759221,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.984440513331393,1.81371744256285,0,0,0,0,0,0,0.421333260395256,12.1005529030421,12.7295142255406,11.6602059588412,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.970601099684455,0,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0,0.258703370739016,0,0.378212160335639,0.175951124163949,0,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,1.66277871149944,0,0,0.169745085775188,0.234690248288502,1.67506257441816,1.42826184531608,1.56106918286239,0.788175720530955,0.8858587585951,0.478364305972461,1.47476983244164,1.89953480052485,2.89298117163023,0,0,0.491764273019036,0.275936746304732,0,0,7.37707254195039,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,1.31909002353184,0.322928853391811,0.180938774784468,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,8.16229381014761,0,0.179427713218951,0,1.35232715822533,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.628839487883947,0.367687016900028,0.666740183404846,0.206035057238894,1.28367683836726,0.505394423527595,1.01391719956096,0.188626341386076,0.37456602987953,0.448176066834085,0.459483751644906,0,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,1.71434626192708,1.24233064311536,0.953744759789284,0.145346416632329,0.752875043322645,0.169229215783353,0.548783918618318,0.526139422875686,0.271608227691724,0,0.830445126869219,0.788035859004508,0.818462086339379,0.77468420592983,0.578719832943424,0.749431733813838,0.701794825336225,0.429742108096597,0.765153328275374,0.661774257358546,0.231867835620421|short_description=p@chr2:125861661..125861676,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3307 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:125861661..125861676,+ | |||
|id=chr2:125861661..125861676,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.28e-10,3;CL:0000359,1.28e-10,3;CL:0002539,1.28e-10,3;CL:0000514,1.28e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!3.01e-09!17;UBERON:0002048!1.06e-07!14;UBERON:0000117!1.06e-07!14;UBERON:0000171!1.06e-07!14;UBERON:0000170!1.06e-07!14;UBERON:0005597!1.06e-07!14;UBERON:0000118!1.06e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.28e-10,3;UBERON:0004237,1.28e-10,3;UBERON:0004695,1.28e-10,3;UBERON:0002111,1.28e-10,3;UBERON:0004178,1.28e-10,3;UBERON:0002048,9.85e-10,14;UBERON:0000117,9.85e-10,14;UBERON:0000171,9.85e-10,14;UBERON:0000170,9.85e-10,14;UBERON:0005597,9.85e-10,14;UBERON:0000118,9.85e-10,14;UBERON:0000947,4.68e-08,4;UBERON:0001637,4.68e-08,4;UBERON:0004573,4.68e-08,4;UBERON:0003509,4.68e-08,4;UBERON:0004571,4.68e-08,4;UBERON:0010191,4.68e-08,4;UBERON:0004572,4.68e-08,4;UBERON:0005153,7.50e-08,17;UBERON:0005178,7.50e-08,17;UBERON:0005181,7.50e-08,17;UBERON:0002224,7.50e-08,17;UBERON:0000915,7.50e-08,17;UBERON:0008947,7.50e-08,17;UBERON:0003258,7.50e-08,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.06457089424156,9.0225468785368,5.87349606917381,0,0,0,0.194429899074283,0,1.43752564364972,0,0,0,0,0,0,0,0,0,1.69422266034566,0,1.3498495759221,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.984440513331393,1.81371744256285,0,0,0,0,0,0,0.421333260395256,12.1005529030421,12.7295142255406,11.6602059588412,0,1.28326477414318,2.54805239706646,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.970601099684455,0,1.45462575940567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.210441855886474,0,0,0,0.150704817835715,0.204109497453984,0.2562274405697,0,0.258703370739016,0,0.378212160335639,0.175951124163949,0,0.556094498451196,1.0447564995665,0.411564272815887,0,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.292399974850665,0.219550115291051,0.536825675041487,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,1.66277871149944,0,0,0.169745085775188,0.234690248288502,1.67506257441816,1.42826184531608,1.56106918286239,0.788175720530955,0.8858587585951,0.478364305972461,1.47476983244164,1.89953480052485,2.89298117163023,0,0,0.491764273019036,0.275936746304732,0,0,7.37707254195039,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0.882113592219848,1.31909002353184,0.322928853391811,0.180938774784468,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655087691238533,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0.0974578807397524,0,0,8.16229381014761,0,0.179427713218951,0,1.35232715822533,0,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.628839487883947,0.367687016900028,0.666740183404846,0.206035057238894,1.28367683836726,0.505394423527595,1.01391719956096,0.188626341386076,0.37456602987953,0.448176066834085,0.459483751644906,0,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,1.71434626192708,1.24233064311536,0.953744759789284,0.145346416632329,0.752875043322645,0.169229215783353,0.548783918618318,0.526139422875686,0.271608227691724,0,0.830445126869219,0.788035859004508,0.818462086339379,0.77468420592983,0.578719832943424,0.749431733813838,0.701794825336225,0.429742108096597,0.765153328275374,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr2:125861661..125861676,+ | |||
}} |
Revision as of 21:56, 13 September 2013
Short description: | p@chr2:125861661..125861676, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:125861661..125861676, + |
Coexpression cluster: | MCL_coexpression_mm9:3307 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.28e-10 | 3 |
vascular associated smooth muscle cell | 1.28e-10 | 3 |
aortic smooth muscle cell | 1.28e-10 | 3 |
smooth muscle myoblast | 1.28e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.28e-10 | 3 |
blood vessel smooth muscle | 1.28e-10 | 3 |
arterial system smooth muscle | 1.28e-10 | 3 |
artery smooth muscle tissue | 1.28e-10 | 3 |
aorta smooth muscle tissue | 1.28e-10 | 3 |
lung | 9.85e-10 | 14 |
respiratory tube | 9.85e-10 | 14 |
respiration organ | 9.85e-10 | 14 |
pair of lungs | 9.85e-10 | 14 |
lung primordium | 9.85e-10 | 14 |
lung bud | 9.85e-10 | 14 |
aorta | 4.68e-08 | 4 |
artery | 4.68e-08 | 4 |
systemic artery | 4.68e-08 | 4 |
arterial blood vessel | 4.68e-08 | 4 |
systemic arterial system | 4.68e-08 | 4 |
aortic system | 4.68e-08 | 4 |
arterial system | 4.68e-08 | 4 |
epithelial bud | 7.50e-08 | 17 |
thoracic cavity element | 7.50e-08 | 17 |
thoracic segment organ | 7.50e-08 | 17 |
thoracic cavity | 7.50e-08 | 17 |
thoracic segment of trunk | 7.50e-08 | 17 |
respiratory primordium | 7.50e-08 | 17 |
endoderm of foregut | 7.50e-08 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.