FFCP PHASE1:Hg19::chr6:91006503..91006517,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=60468|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14078|TSSclassifier=S|UniProt=Q9BYV9,Q7Z6Q0|association_with_transcript=-42bp_to_ENST00000257749,ENST00000343122,ENST00000406998,ENST00000453877,ENST00000470301,ENST00000472023,ENST00000494747_5end|coexpression_cluster_id=C1053|description=CAGE_peak_3_at_BACH2_5end|id=chr6:91006503..91006517,-|ontology_enrichment_celltype=CL:0000542!8.44e-16!53;CL:0000051!8.44e-16!53;CL:0000838!2.87e-15!52;CL:0000791!1.14e-11!18;CL:0000789!1.14e-11!18;CL:0002420!1.14e-11!18;CL:0002419!1.14e-11!18;CL:0000790!1.14e-11!18;CL:0000236!2.01e-10!14;CL:0000738!1.52e-08!140;CL:0000625!2.13e-08!11;CL:0002087!8.68e-08!119;CL:0000084!9.56e-08!25;CL:0000827!9.56e-08!25;CL:0000945!3.56e-07!24;CL:0000826!3.56e-07!24|ontology_enrichment_celltype_v019=CL:0000236;2.50e-25;13!CL:0000542;6.79e-21;53!CL:0000791;1.28e-20;18!CL:0000789;1.28e-20;18!CL:0002419;1.28e-20;18!CL:0000945;5.67e-16;24!CL:0000084;1.28e-13;25!CL:0000625;3.92e-12;11!CL:0000624;4.89e-12;6!CL:0002087;5.82e-07;104!CL:0000898;6.36e-07;3|ontology_enrichment_celltype_v019_2=CL:0000542,7.45e-34,53;CL:0000051,7.45e-34,53;CL:0000838,1.28e-32,52;CL:0000236,3.72e-23,14;CL:0000791,5.36e-21,18;CL:0000789,5.36e-21,18;CL:0002420,5.36e-21,18;CL:0002419,5.36e-21,18;CL:0000790,5.36e-21,18;CL:0002087,4.24e-19,115;CL:0000738,5.43e-19,136;CL:0000945,6.14e-16,24;CL:0000826,6.14e-16,24;CL:0000988,1.78e-15,177;CL:0002031,1.34e-14,120;CL:0000037,2.23e-14,168;CL:0000084,7.11e-14,25;CL:0000827,7.11e-14,25;CL:0000625,1.85e-12,11;CL:0000624,4.41e-12,6;CL:0002032,8.85e-11,161;CL:0000837,8.85e-11,161;CL:0000898,5.97e-07,3|ontology_enrichment_development_v019=CL:0000051;6.79e-21;53!CL:0000790;1.28e-20;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.81e-12!82;UBERON:0005743!5.47e-12!86;UBERON:0000073!9.88e-12!94;UBERON:0001016!9.88e-12!94;UBERON:0001049!6.20e-11!57;UBERON:0005068!6.20e-11!57;UBERON:0006241!6.20e-11!57;UBERON:0007135!6.20e-11!57;UBERON:0007023!7.88e-11!115;UBERON:0002616!3.74e-09!59;UBERON:0000955!4.05e-09!69;UBERON:0006238!4.05e-09!69;UBERON:0000178!6.29e-09!15;UBERON:0000179!6.29e-09!15;UBERON:0000463!6.29e-09!15;UBERON:0001893!6.47e-09!34;UBERON:0002020!7.87e-09!34;UBERON:0003528!7.87e-09!34;UBERON:0002791!1.19e-08!33;UBERON:0003080!1.28e-08!42;UBERON:0002780!2.66e-08!41;UBERON:0001890!2.66e-08!41;UBERON:0006240!2.66e-08!41;UBERON:0001869!4.16e-08!32|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-17;15!UBERON:0000179;1.17e-17;15!UBERON:0000463;1.17e-17;15!UBERON:0002390;5.82e-14;32!UBERON:0002193;1.30e-08;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.12e-17,15;UBERON:0000179,2.12e-17,15;UBERON:0000463,2.12e-17,15|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0.408001382488506,0,0,0.547497700291537,0.251085279189606,0,0,0,2.36018566109342,0.383829398097213,0.928896739896456,0,0,0,2.71135202031056,5.54460006700944,1.46800219667424,1.10799081706375,3.40925560699241,1.30206522429511,0.223915474239924,0,0,0.145398238779565,0,0,0.464858073811369,1.23350366406548,0,0.575384784644301,0.768482119587302,0,1.37898272294647,1.93645405075148,0,0,0.272906150057846,0.449446968890169,0,0.962787081228281,0,0,0.598390972864896,0.426224750532694,0,0.56738522469114,0,0,0,0.217188844705117,0,1.10483290796269,0.316462387440884,0,0.212604299965044,0,0.44931452458598,0,0.16072558669708,0,0,0,14.0796995569058,15.2918811153397,16.011166569544,14.5088275672612,12.0118796110804,13.7940585589076,10.5767179645578,11.4486450544244,29.5990743936913,30.5363338472888,24.0832133718894,1.32171328579026,4.48406850385229,0.526768169550154,12.5894252872853,8.25322601773246,3.70082698199117,1.33749196312542,19.5553359980154,16.0972253949809,15.5861382726329,0.779873198196215,7.07054177939609,1.99380505125259,4.60366568400527,0.25618263945135,0.910415432919148,3.94650971048823,3.59255023121603,5.21645554323094,21.0566919690126,23.0085112157153,18.8163942848958,2.83273356743915,4.98186641682498,3.4362744548263,2.27717722817553,1.91139248594458,1.95325036156926,0.950452044448374,3.76437797694432,3.96758494578697,6.24653632761729,2.8413270245282,0.821127996921047,7.66105624253983,4.27904313253612,6.66192257860875,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0.238490624305342,2.28797964312051,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,2.63560834872127,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0,0.545492241181669,0,0.243947412259191,0.132529768321485,0.232387885739037,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.95394953340702,1.7658523976586,0.122988438543114,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=60468 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14078 | |||
|TSSclassifier=S | |||
|UniProt=Q9BYV9,Q7Z6Q0 | |||
|association_with_transcript=-42bp_to_ENST00000257749,ENST00000343122,ENST00000406998,ENST00000453877,ENST00000470301,ENST00000472023,ENST00000494747_5end | |||
|coexpression_cluster_id=C1053 | |||
|description=CAGE_peak_3_at_BACH2_5end | |||
|id=chr6:91006503..91006517,- | |||
|ontology_enrichment_celltype=CL:0000542!8.44e-16!53;CL:0000051!8.44e-16!53;CL:0000838!2.87e-15!52;CL:0000791!1.14e-11!18;CL:0000789!1.14e-11!18;CL:0002420!1.14e-11!18;CL:0002419!1.14e-11!18;CL:0000790!1.14e-11!18;CL:0000236!2.01e-10!14;CL:0000738!1.52e-08!140;CL:0000625!2.13e-08!11;CL:0002087!8.68e-08!119;CL:0000084!9.56e-08!25;CL:0000827!9.56e-08!25;CL:0000945!3.56e-07!24;CL:0000826!3.56e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;2.50e-25;13!CL:0000542;6.79e-21;53!CL:0000791;1.28e-20;18!CL:0000789;1.28e-20;18!CL:0002419;1.28e-20;18!CL:0000945;5.67e-16;24!CL:0000084;1.28e-13;25!CL:0000625;3.92e-12;11!CL:0000624;4.89e-12;6!CL:0002087;5.82e-07;104!CL:0000898;6.36e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.45e-34,53;CL:0000051,7.45e-34,53;CL:0000838,1.28e-32,52;CL:0000236,3.72e-23,14;CL:0000791,5.36e-21,18;CL:0000789,5.36e-21,18;CL:0002420,5.36e-21,18;CL:0002419,5.36e-21,18;CL:0000790,5.36e-21,18;CL:0002087,4.24e-19,115;CL:0000738,5.43e-19,136;CL:0000945,6.14e-16,24;CL:0000826,6.14e-16,24;CL:0000988,1.78e-15,177;CL:0002031,1.34e-14,120;CL:0000037,2.23e-14,168;CL:0000084,7.11e-14,25;CL:0000827,7.11e-14,25;CL:0000625,1.85e-12,11;CL:0000624,4.41e-12,6;CL:0002032,8.85e-11,161;CL:0000837,8.85e-11,161;CL:0000898,5.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;6.79e-21;53!CL:0000790;1.28e-20;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.81e-12!82;UBERON:0005743!5.47e-12!86;UBERON:0000073!9.88e-12!94;UBERON:0001016!9.88e-12!94;UBERON:0001049!6.20e-11!57;UBERON:0005068!6.20e-11!57;UBERON:0006241!6.20e-11!57;UBERON:0007135!6.20e-11!57;UBERON:0007023!7.88e-11!115;UBERON:0002616!3.74e-09!59;UBERON:0000955!4.05e-09!69;UBERON:0006238!4.05e-09!69;UBERON:0000178!6.29e-09!15;UBERON:0000179!6.29e-09!15;UBERON:0000463!6.29e-09!15;UBERON:0001893!6.47e-09!34;UBERON:0002020!7.87e-09!34;UBERON:0003528!7.87e-09!34;UBERON:0002791!1.19e-08!33;UBERON:0003080!1.28e-08!42;UBERON:0002780!2.66e-08!41;UBERON:0001890!2.66e-08!41;UBERON:0006240!2.66e-08!41;UBERON:0001869!4.16e-08!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.17e-17;15!UBERON:0000179;1.17e-17;15!UBERON:0000463;1.17e-17;15!UBERON:0002390;5.82e-14;32!UBERON:0002193;1.30e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.12e-17,15;UBERON:0000179,2.12e-17,15;UBERON:0000463,2.12e-17,15 | |||
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| |||
|short_description=p3@BACH2 | |||
}} |
Revision as of 22:08, 13 September 2013
Short description: | p3@BACH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BACH2_5end |
Coexpression cluster: | C1053_CD19_CD4_Natural_CD8_Peripheral_granulocyte_tonsil |
Association with transcript: | -42bp_to_ENST00000257749, ENST00000343122, ENST00000406998, ENST00000453877, ENST00000470301, ENST00000472023, ENST00000494747_5end |
EntrezGene: | BACH2 |
HGNC: | 14078 |
UniProt: | Q9BYV9Q7Z6Q0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.45e-34 | 53 |
common lymphoid progenitor | 7.45e-34 | 53 |
lymphoid lineage restricted progenitor cell | 1.28e-32 | 52 |
B cell | 3.72e-23 | 14 |
mature alpha-beta T cell | 5.36e-21 | 18 |
alpha-beta T cell | 5.36e-21 | 18 |
immature T cell | 5.36e-21 | 18 |
mature T cell | 5.36e-21 | 18 |
immature alpha-beta T cell | 5.36e-21 | 18 |
nongranular leukocyte | 4.24e-19 | 115 |
leukocyte | 5.43e-19 | 136 |
lymphocyte of B lineage | 6.14e-16 | 24 |
pro-B cell | 6.14e-16 | 24 |
hematopoietic cell | 1.78e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 1.34e-14 | 120 |
hematopoietic stem cell | 2.23e-14 | 168 |
T cell | 7.11e-14 | 25 |
pro-T cell | 7.11e-14 | 25 |
CD8-positive, alpha-beta T cell | 1.85e-12 | 11 |
CD4-positive, alpha-beta T cell | 4.41e-12 | 6 |
hematopoietic oligopotent progenitor cell | 8.85e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.85e-11 | 161 |
naive T cell | 5.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.12e-17 | 15 |
haemolymphatic fluid | 2.12e-17 | 15 |
organism substance | 2.12e-17 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.