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FFCP PHASE1:Mm9::chr2:158235603..158235642,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=228850|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000143394,ENSMUST00000150789,ENSMUST00000173137_5end|description=CAGE_peak_1_at_Ralgapb_5end|id=chr2:158235603..158235642,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!3.33e-10!86;UBERON:0000153!7.29e-10!94;UBERON:0000033!1.80e-09!63;UBERON:0007023!2.31e-09!51;UBERON:0000064!2.40e-09!99;UBERON:0000955!9.09e-09!50;UBERON:0006238!9.09e-09!50;UBERON:0004121!1.12e-08!102;UBERON:0000924!1.12e-08!102;UBERON:0006601!1.12e-08!102;UBERON:0002616!2.82e-08!49;UBERON:0002791!2.29e-07!29;UBERON:0003528!2.29e-07!29;UBERON:0001893!2.29e-07!29;UBERON:0001049!4.14e-07!52;UBERON:0005068!4.14e-07!52;UBERON:0006241!4.14e-07!52;UBERON:0007135!4.14e-07!52;UBERON:0003056!8.63e-07!49;UBERON:0002020!9.82e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.31e-09,51;UBERON:0004121,1.29e-08,95;UBERON:0000924,1.29e-08,95;UBERON:0006601,1.29e-08,95;UBERON:0010371,5.63e-08,73;UBERON:0000073,6.98e-08,54;UBERON:0000955,1.68e-07,47;UBERON:0006238,1.68e-07,47;UBERON:0003528,2.29e-07,29;UBERON:0002791,2.29e-07,29;UBERON:0001893,2.29e-07,29;UBERON:0001049,4.14e-07,52;UBERON:0005068,4.14e-07,52;UBERON:0006241,4.14e-07,52;UBERON:0007135,4.14e-07,52;UBERON:0002616,4.91e-07,46;UBERON:0003056,8.63e-07,49;UBERON:0002020,9.82e-07,34|phase1_expression=25.1433689954527,33.1526637257393,29.1199513209303,38.4129548359674,41.5743455855468,26.8606835059024,22.8940387783615,38.3496270621482,33.7892933164,39.5569049484169,21.7446819646391,19.1453181588807,41.601777373283,35.7549445893699,15.6561588053361,19.6401009368131,11.8925519281785,41.9564679926456,48.9498527972487,36.0731204028326,29.8501948430255,14.4964788753293,16.4555867157529,19.1990907352088,24.0879745120529,24.6919744569459,22.3996238002719,18.3150547783006,22.9928337542212,27.4712841438325,17.2949798311138,10.7955214488137,11.6862309641068,15.8481681015439,23.3969811998532,15.1273527276228,16.7418872135143,52.3164538421135,32.8160844699996,39.7878045420087,58.2349173150704,49.1792749170081,50.0075663622088,23.6686017794085,24.431840423903,20.74078299427,11.7358701652206,9.59310688073965,5.93152693383074,12.8323733389027,10.3589952002768,2.87505128729943,31.8786951509699,36.9934692425786,30.2484419228218,19.294457702696,25.5014761545493,15.4701627683233,32.168317276676,30.1524858185059,32.9592329823213,7.11573517345177,10.6715375533337,5.84934816232909,13.8441290759376,4.2628806896766,10.4860038681442,14.9845139075406,34.8397097356485,27.2711995430015,31.5487442027073,15.996455126613,21.8659855542097,29.6427734100189,32.6833056172186,28.4957823849107,44.0463523997555,39.8384494825786,40.8593378461608,39.0383411681374,35.1312551433253,35.9430225684164,34.0603258781685,33.7657566019008,32.3932285286837,27.1058298635774,28.1895927982224,34.6702969235059,42.1794896865835,45.4185076241781,38.5519769973231,23.2314446784974,6.79971333707751,9.17495425784289,11.695975514058,11.2006721774334,19.3813299781818,16.3613109674935,10.9110121933205,12.7202246823722,27.6053102762294,15.3991772897181,20.3844191765317,21.3320010945999,15.3708639117962,17.4818307177818,17.1878311305026,19.6396273116783,52.5643903803759,40.9700303818916,16.1341353892506,24.6617037432834,21.2166257475574,26.2257394561563,30.8082412695547,28.651982823166,32.6297357409373,34.414646946939,27.4229271104461,18.7649545938995,23.1883594383413,16.4857586065976,37.2783522436244,54.4572282441478,49.2199761011619,25.8011625760677,15.5759661857696,8.99854096490112,13.5965142968179,53.1756769887121,55.3575729410538,31.4135880282161,53.0164176586443,49.0973678074235,41.9731850010311,45.1030711328366,20.5715514977639,25.379022004459,29.0631172198726,40.404836330203,17.8265006858904,17.2426578325105,19.9868964083938,24.5648853072216,32.5214465943347,34.5907044769094,33.170410494144,39.5816157230694,13.5807835547691,25.9075329829912,21.1141348996739,17.9740500590611,26.6925359256574,30.9944428204728,27.3690241422565,17.1169469463904,8.42655824775882,12.610047448621,11.0823764764281,22.3695834338342,21.8109235782419,19.0865785148676,16.8088762265499,17.3152523937715,16.9693824176116,20.4629871380359,23.6080593231665,20.667465598989,20.4054213892716,20.1925980817287,30.4818723892418,30.2633973970438,25.4678133737619,29.5254121272818,44.1608891984667,35.5020912708531,39.319835175072,20.89159476642,18.1295012954949,17.4177503895329,22.036335886078,22.386871233191,21.3482922091076,20.9248188723815,28.9462727542152,19.4344766574333,26.6415321328286,19.8956472041151,19.8863368861503,23.3693046250098,26.152704034838,30.0703322614094,18.0184505905428,22.735454009336,27.0498565615393,25.0491133249736,21.7226785627741,26.3009324588695,33.3888916016078,32.4742325555125,32.1847392074818,34.0576172424169,16.8977997439675,16.5176654658933,13.3660116676978,15.9652099793246,14.8087888613607,14.470629585145,12.2220408855082,19.2756412092043,13.132953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|EntrezGene=228850
|HGNC=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000143394,ENSMUST00000150789,ENSMUST00000173137_5end
|description=CAGE_peak_1_at_Ralgapb_5end
|id=chr2:158235603..158235642,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!3.33e-10!86;UBERON:0000153!7.29e-10!94;UBERON:0000033!1.80e-09!63;UBERON:0007023!2.31e-09!51;UBERON:0000064!2.40e-09!99;UBERON:0000955!9.09e-09!50;UBERON:0006238!9.09e-09!50;UBERON:0004121!1.12e-08!102;UBERON:0000924!1.12e-08!102;UBERON:0006601!1.12e-08!102;UBERON:0002616!2.82e-08!49;UBERON:0002791!2.29e-07!29;UBERON:0003528!2.29e-07!29;UBERON:0001893!2.29e-07!29;UBERON:0001049!4.14e-07!52;UBERON:0005068!4.14e-07!52;UBERON:0006241!4.14e-07!52;UBERON:0007135!4.14e-07!52;UBERON:0003056!8.63e-07!49;UBERON:0002020!9.82e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.31e-09,51;UBERON:0004121,1.29e-08,95;UBERON:0000924,1.29e-08,95;UBERON:0006601,1.29e-08,95;UBERON:0010371,5.63e-08,73;UBERON:0000073,6.98e-08,54;UBERON:0000955,1.68e-07,47;UBERON:0006238,1.68e-07,47;UBERON:0003528,2.29e-07,29;UBERON:0002791,2.29e-07,29;UBERON:0001893,2.29e-07,29;UBERON:0001049,4.14e-07,52;UBERON:0005068,4.14e-07,52;UBERON:0006241,4.14e-07,52;UBERON:0007135,4.14e-07,52;UBERON:0002616,4.91e-07,46;UBERON:0003056,8.63e-07,49;UBERON:0002020,9.82e-07,34
|phase1_expression=25.1433689954527,33.1526637257393,29.1199513209303,38.4129548359674,41.5743455855468,26.8606835059024,22.8940387783615,38.3496270621482,33.7892933164,39.5569049484169,21.7446819646391,19.1453181588807,41.601777373283,35.7549445893699,15.6561588053361,19.6401009368131,11.8925519281785,41.9564679926456,48.9498527972487,36.0731204028326,29.8501948430255,14.4964788753293,16.4555867157529,19.1990907352088,24.0879745120529,24.6919744569459,22.3996238002719,18.3150547783006,22.9928337542212,27.4712841438325,17.2949798311138,10.7955214488137,11.6862309641068,15.8481681015439,23.3969811998532,15.1273527276228,16.7418872135143,52.3164538421135,32.8160844699996,39.7878045420087,58.2349173150704,49.1792749170081,50.0075663622088,23.6686017794085,24.431840423903,20.74078299427,11.7358701652206,9.59310688073965,5.93152693383074,12.8323733389027,10.3589952002768,2.87505128729943,31.8786951509699,36.9934692425786,30.2484419228218,19.294457702696,25.5014761545493,15.4701627683233,32.168317276676,30.1524858185059,32.9592329823213,7.11573517345177,10.6715375533337,5.84934816232909,13.8441290759376,4.2628806896766,10.4860038681442,14.9845139075406,34.8397097356485,27.2711995430015,31.5487442027073,15.996455126613,21.8659855542097,29.6427734100189,32.6833056172186,28.4957823849107,44.0463523997555,39.8384494825786,40.8593378461608,39.0383411681374,35.1312551433253,35.9430225684164,34.0603258781685,33.7657566019008,32.3932285286837,27.1058298635774,28.1895927982224,34.6702969235059,42.1794896865835,45.4185076241781,38.5519769973231,23.2314446784974,6.79971333707751,9.17495425784289,11.695975514058,11.2006721774334,19.3813299781818,16.3613109674935,10.9110121933205,12.7202246823722,27.6053102762294,15.3991772897181,20.3844191765317,21.3320010945999,15.3708639117962,17.4818307177818,17.1878311305026,19.6396273116783,52.5643903803759,40.9700303818916,16.1341353892506,24.6617037432834,21.2166257475574,26.2257394561563,30.8082412695547,28.651982823166,32.6297357409373,34.414646946939,27.4229271104461,18.7649545938995,23.1883594383413,16.4857586065976,37.2783522436244,54.4572282441478,49.2199761011619,25.8011625760677,15.5759661857696,8.99854096490112,13.5965142968179,53.1756769887121,55.3575729410538,31.4135880282161,53.0164176586443,49.0973678074235,41.9731850010311,45.1030711328366,20.5715514977639,25.379022004459,29.0631172198726,40.404836330203,17.8265006858904,17.2426578325105,19.9868964083938,24.5648853072216,32.5214465943347,34.5907044769094,33.170410494144,39.5816157230694,13.5807835547691,25.9075329829912,21.1141348996739,17.9740500590611,26.6925359256574,30.9944428204728,27.3690241422565,17.1169469463904,8.42655824775882,12.610047448621,11.0823764764281,22.3695834338342,21.8109235782419,19.0865785148676,16.8088762265499,17.3152523937715,16.9693824176116,20.4629871380359,23.6080593231665,20.667465598989,20.4054213892716,20.1925980817287,30.4818723892418,30.2633973970438,25.4678133737619,29.5254121272818,44.1608891984667,35.5020912708531,39.319835175072,20.89159476642,18.1295012954949,17.4177503895329,22.036335886078,22.386871233191,21.3482922091076,20.9248188723815,28.9462727542152,19.4344766574333,26.6415321328286,19.8956472041151,19.8863368861503,23.3693046250098,26.152704034838,30.0703322614094,18.0184505905428,22.735454009336,27.0498565615393,25.0491133249736,21.7226785627741,26.3009324588695,33.3888916016078,32.4742325555125,32.1847392074818,34.0576172424169,16.8977997439675,16.5176654658933,13.3660116676978,15.9652099793246,14.8087888613607,14.470629585145,12.2220408855082,19.2756412092043,13.1329533687779,7.4131581560782,17.2521847832825,14.8856379067401,14.3537329632698,15.4073115547738,11.8402292924462,11.0962009913574,41.3847145973194,15.9172785887207,24.1188165134198,23.424821836976,26.5199980566007,29.3135950523178,37.1348079782181,38.6364622758442,36.8866237208487,36.3202091023991,41.1393303136317,38.3440156434827,38.3360659742288,42.9607703987089,22.6186925908908,16.3171705145613,22.6211565588757,24.2824336748165,37.7293886471311,41.4929370536399,19.3443235544477,32.8212205365685,18.2994767261429,17.5697434933487,24.1274205460735,20.5513166239195,24.0622568008986,21.2307398091624,16.5972387686707,22.2114452012597,30.4371589018823,48.1981974632711,31.7945790866522,17.450429159391,18.7320003256613,31.1793532418092,26.5490276679926,16.5090832585387,15.4185014052023,15.8428266994954,13.2885851796348,18.1386737286917,28.1686839553361,21.8120237686503,23.1723295950069,25.2829406348653,21.0837217149998,27.8465966770104,30.2991249120871,21.7873923777885,16.4285528404098,21.6480405381908,25.7143338781297,25.6851097346982,19.7458824722545,16.1366423030738,21.3551254337976,27.7500012831604,30.2123905335298,35.7803168883012,37.621211420146,34.8608706084741,37.2441713289786,42.1842112344807,30.3140070095045,43.3895206704593,28.3645662124435,17.9556575128004,21.6677597022563,16.0113188453987,27.8856224550891,25.6231553991305,16.8278645693917,16.374319921868,15.7547970137043,10.5013767981662,17.2403116501719,19.7219883113043,19.9809880520332,20.2815647134035,16.8139174084557,26.7031405841945,28.1848284023396,29.0549095602273,33.5702780825744,34.7950015328678,37.2037339531566,23.1750646368167,17.8695169693665,21.0007283411571,21.3113708738256,18.9230860549672,26.5227359339404,29.4261909747327,44.25064334765,46.1425670777672,37.4439008135225,40.4494234404068,15.4071163620525,16.0229093177131,18.1889152168913,27.2120577414572,30.7956099910961,30.1690578295122,26.7318044185985,32.2082975334591,32.3116860217199,30.95363883701,38.7882365344215,36.1756524567639,38.3356239155546,35.369939843973,13.763129109192,8.52281637790019,10.9125000636651,36.512833272084,35.2843053848222,31.3189277497023,32.3696252409389,36.6147635945815,37.2736216127264,37.2863441570813,37.8111038870002,31.4491323688948,47.2706938641743,45.323633843382,31.0510350106631,33.3237690385923,35.345107900768,45.5629074341602,19.3044466506569,35.5132137326918,22.5368359595457,25.2830985751026,21.1709294254262,18.2005073365514,26.8918540639954,24.9302419259062,24.389859928978,24.7643267528522,22.5596576902313,26.0304351112785,18.4473769715668,20.4240236171533,21.1936880446213,21.4332161077383,24.9151300781439,25.4640171012091,24.3130681473951,24.2878218221756,22.6293706574374,21.8295241575985,21.2208209053116,21.3659232449523,23.4332357234173,23.4382463859944,25.7928441750609,22.3609254722166,23.6299158091799,23.0068331379673,21.7102083167239,22.557526464004,18.0061658994663,24.1701472250107,24.499139594605,27.2293529952361,19.8841867178597,26.4291396479407,21.8068698558481,20.5150019781149,19.245030356495
|short_description=p1@Ralgapb
}}

Revision as of 22:42, 13 September 2013

Short description:p1@Ralgapb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ralgapb_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000143394, ENSMUST00000150789, ENSMUST00000173137_5end
EntrezGene:Ralgapb
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ralgapb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I533.15
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I629.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I338.41
CD326+ enterocyte, pool2.CNhs13197.11849-124I441.57
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.86
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I822.89
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E938.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E733.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F239.56
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E621.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F119.15
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E441.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E835.75
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A115.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A319.64
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A511.89
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A241.96
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A448.95
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A636.07
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A329.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.46
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D224.09
GP2+ M cell, pool1.CNhs13228.11845-124H924.69
GP2+ M cell, pool2.CNhs13231.11846-124I122.40
GP2+ M cell, pool3.CNhs13240.11847-124I218.32
Ileum epithelium, pool1.CNhs13199.10252-104B922.99
Ileum epithelium, pool2.CNhs13232.10253-104C127.47
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C817.29
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.13
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G852.32
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H132.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H339.79
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G958.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H249.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H450.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D924.43
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B320.74
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B711.74
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.59
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.93
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C312.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C410.36
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A231.88
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I936.99
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A130.25
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E125.50
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.47
Mouse Granule cells, donor1.CNhs12131.11713-123C332.17
Mouse Granule cells, donor2.CNhs12357.11731-123E330.15
Mouse Granule cells, donor3.CNhs12108.11636-122C732.96
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C810.49
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D534.84
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D931.55
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F116.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.64
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F232.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D628.50
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D344.05
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F339.84
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D740.86
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D439.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F435.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E434.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I632.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D627.11
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F628.19
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E134.67
Mouse Schwann, donor1.CNhs12507.11728-123D942.18
Mouse Schwann, donor2.CNhs12573.11746-123F945.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.55
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F723.23
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.17
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.70
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.20
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.38
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E310.91
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I812.72
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.61
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H115.40
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G217.48
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G317.19
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B619.64
accessory axillary lymph node, adult.CNhs10475.1063-29H952.56
adrenal gland, adult.CNhs10508.49-24D740.97
adrenal gland, embryo E14.CNhs11038.406-44C516.13
adrenal gland, embryo E16.CNhs11004.1254-43D624.66
adrenal gland, embryo E17.CNhs11043.1263-45I121.22
adrenal gland, embryo E18.CNhs11026.1262-18F526.23
adrenal gland, neonate N00.CNhs11191.1311-23C130.81
adrenal gland, neonate N25.CNhs11223.1377-27I328.65
amnion, adult pregnant day17.5.CNhs10488.583-22A832.63
aorta, adult.CNhs10498.46-23H134.41
bone (os femoris), adult.CNhs10483.56-12G227.42
bone (os femoris), neonate N02.CNhs11227.1985-43F518.76
bone (os femoris), neonate N16.CNhs11225.1525-43A623.19
bone (os femoris), neonate N20.CNhs11195.1350-25C316.49
cecum, adult.CNhs10467.37-13H437.28
cerebellum, adult.CNhs10494.15-8B254.46
cerebellum, neonate N30.CNhs11135.1395-42I249.22
colon, adult.CNhs10468.36-18H725.80
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.58
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.60
corpora quadrigemina, adult.CNhs10501.16-22A453.18
corpus striatum, adult.CNhs10487.19-21D855.36
corpus striatum, neonate N00.CNhs11226.630-43F131.41
cortex, adult.CNhs10473.12-14D553.02
cortex, neonate N30.CNhs11107.1392-42F249.10
diencephalon, adult.CNhs10482.20-12F241.97
diencephalon, neonate N30.CNhs11201.1388-42B245.10
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B120.57
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.38
epididymis, adult.CNhs10490.58-23B229.06
eyeball, adult.CNhs10484.31-12G440.40
eyeball, embryo E12.CNhs11016.345-16C617.83
eyeball, embryo E14.CNhs10521.399-16E217.24
eyeball, embryo E15.CNhs10593.426-16C919.99
eyeball, embryo E17.CNhs11023.1261-18D424.56
eyeball, neonate N00.CNhs11207.633-15C632.52
eyeball, neonate N01.CNhs11140.1532-43E734.59
eyeball, neonate N02.CNhs11205.1551-44G833.17
eyeball, neonate N16.CNhs11188.777-19A239.58
forelimb, embryo E11.CNhs10596.335-25E213.58
forelimb, embryo E12.CNhs10600.359-14H225.91
forelimb, embryo E13.CNhs10589.384-1E221.11
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E726.69
forelimb, embryo E17.CNhs10598.1517-43C430.99
forelimb, embryo E18.CNhs11008.1520-43B527.37
gonad, embryo E13.CNhs11044.1564-45I617.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.61
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.08
heart, embryo E11.CNhs10586.331-24E922.37
heart, embryo E12.CNhs11015.353-12F521.81
heart, embryo E13.CNhs11013.376-3I919.09
heart, embryo E14.CNhs10597.403-26D416.81
heart, embryo E15.CNhs11017.431-16C817.32
heart, embryo E16.CNhs11021.457-17C616.97
heart, embryo E17.CNhs11025.479-18E520.46
heart, embryo E18.CNhs11030.1283-20G323.61
heart, neonate N00.CNhs11213.639-21E320.67
heart, neonate N03.CNhs11221.1349-25I220.41
heart, neonate N10.CNhs11118.749-24G120.19
heart, neonate N16.CNhs11209.782-15G130.48
heart, neonate N20.CNhs11127.821-26I630.26
heart, neonate N25.CNhs11196.1351-25D325.47
heart, neonate N30.CNhs11202.1390-42D229.53
hippocampus, adult.CNhs10478.13-16E844.16
hippocampus, neonate N00.CNhs11228.627-43G135.50
intestinal mucosa, adult.CNhs10506.860-29I339.32
intestine, adult.CNhs10496.178-9A320.89
intestine, embryo E12.CNhs11019.1251-16I518.13
intestine, embryo E13.CNhs11010.381-16D517.42
intestine, embryo E15.CNhs10602.976-16D822.04
intestine, embryo E16.CNhs10585.463-22H422.39
intestine, embryo E17.CNhs10582.482-18D321.35
intestine, embryo E18.CNhs10526.1289-20F720.92
intestine, neonate N00.CNhs11126.644-26D128.95
intestine, neonate N01.CNhs11192.1322-23E919.43
intestine, neonate N06.CNhs11102.688-20B826.64
intestine, neonate N07.CNhs11095.720-20F219.90
intestine, neonate N10.CNhs11098.755-23A519.89
intestine, neonate N20.CNhs11187.827-18D123.37
intestine, neonate N25.CNhs11121.1352-25E326.15
intestine, neonate N30.CNhs11131.1384-42G130.07
kidney, embryo E14.CNhs10606.411-4I918.02
kidney, embryo E15.CNhs10997.434-16F822.74
kidney, embryo E16.CNhs10584.464-22A527.05
kidney, embryo E17.CNhs11028.483-18I225.05
kidney, embryo E18.CNhs11001.1288-20C721.72
kidney, neonate N00.CNhs11214.646-21G726.30
kidney, neonate N10.CNhs11206.758-6D533.39
kidney, neonate N20.CNhs11113.832-19I132.47
kidney, neonate N25.CNhs11122.1353-25F332.18
kidney, neonate N30.CNhs11203.1385-42H134.06
liver, adult pregnant day01.CNhs10466.508-5B216.90
liver, embryo E12.CNhs10601.355-15F816.52
liver, embryo E13.CNhs10524.378-3H613.37
liver, embryo E14.CNhs10594.409-16E115.97
liver, embryo E15.CNhs10520.433-16D714.81
liver, embryo E16.CNhs10523.462-17F514.47
liver, embryo E17.CNhs10510.481-18A312.22
liver, embryo E18.CNhs10579.499-43G419.28
liver, neonate N00.CNhs11117.641-24F413.13
liver, neonate N03.CNhs11123.1345-25G27.41
liver, neonate N06.CNhs11101.684-20A817.25
liver, neonate N07.CNhs11103.716-20H214.89
liver, neonate N10.CNhs11115.751-24B914.35
liver, neonate N20.CNhs11220.823-25A315.41
liver, neonate N25.CNhs11198.1368-26H111.84
liver, neonate N30.CNhs11106.1382-42D111.10
lung, adult.CNhs10474.28-22B141.38
lung, embryo E12.CNhs10522.354-16G215.92
lung, embryo E14.CNhs10604.404-26F824.12
lung, embryo E15.CNhs11020.432-17C523.42
lung, embryo E16.CNhs10998.458-17B626.52
lung, embryo E17.CNhs10605.480-44A629.31
lung, embryo E18.CNhs10583.1287-20I637.13
lung, neonate N00.CNhs11224.640-42C638.64
lung, neonate N06.CNhs11212.683-20E536.89
lung, neonate N07.CNhs11111.715-19A336.32
lung, neonate N10.CNhs11219.750-23E641.14
lung, neonate N20.CNhs11109.822-18A438.34
lung, neonate N25.CNhs11119.1359-25C738.34
lung, neonate N30.CNhs11133.1394-42H242.96
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.32
mammary gland, adult lactating day02.CNhs10480.595-22B622.62
mammary gland, adult pregnant day19.CNhs10476.588-5H224.28
medulla oblongata, adult.CNhs10477.17-12C237.73
medulla oblongata, neonate N30.CNhs11200.1396-42A341.49
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C719.34
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.82
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E217.57
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E324.13
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.55
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.06
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D921.23
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D416.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D630.44
olfactory brain, adult.CNhs10489.18-22I948.20
ovary, adult.CNhs10507.91-2I731.79
ovary, embryo E18.CNhs11040.505-44H717.45
ovary, neonate N00.CNhs11217.1299-22I418.73
oviduct, adult pregnant day01.CNhs10500.988-6G631.18
pancreas, adult.CNhs10486.34-16E426.55
pancreas, embryo E14.CNhs11012.405-44F416.51
pancreas, embryo E15.CNhs11042.1556-45F215.42
pancreas, embryo E16.CNhs11003.460-26E515.84
pancreas, embryo E17.CNhs10599.1558-45G313.29
pancreas, embryo E18.CNhs10580.1535-43I718.14
pancreas, neonate N00.CNhs11105.645-26G928.17
pancreas, neonate N01.CNhs11138.1531-43D721.81
pancreas, neonate N02.CNhs11139.1539-43D823.17
pancreas, neonate N16.CNhs11136.787-43B625.28
pancreas, neonate N25.CNhs11094.1555-45E221.08
pancreas, neonate N30.CNhs11182.1548-44H527.85
pituitary gland, adult.CNhs10493.21-1G830.30
pituitary gland, embryo E12.CNhs11018.346-16E621.79
pituitary gland, embryo E13.CNhs11009.370-44C716.43
pituitary gland, embryo E14.CNhs11037.398-44A521.65
pituitary gland, embryo E15.CNhs10592.427-16B925.71
pituitary gland, embryo E16.CNhs11036.449-43F625.69
pituitary gland, embryo E17.CNhs11039.1265-44F519.75
pituitary gland, neonate N00.CNhs11190.1308-22E916.14
placenta, adult pregnant day10.CNhs10472.539-13I721.36
placenta, adult pregnant day17.CNhs10464.577-18G327.75
prostate, adult.CNhs10470.859-1F830.21
skin, adult.CNhs10492.30-1C335.78
skin, neonate N00.CNhs11124.650-25G437.62
skin, neonate N03.CNhs11215.662-22H334.86
skin, neonate N06.CNhs11097.693-20I537.24
skin, neonate N10.CNhs11108.762-6C442.18
small intestine, neonate N16.CNhs11114.790-21I130.31
spinal cord, adult.CNhs10505.24-13C943.39
spleen, adult.CNhs10465.25-2G228.36
spleen, embryo E16.CNhs11035.461-43C117.96
spleen, embryo E18.CNhs11011.1271-21F221.67
spleen, neonate N10.CNhs11116.752-24D116.01
spleen, neonate N20.CNhs11112.824-19H127.89
spleen, neonate N25.CNhs11099.1354-25G325.62
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C616.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.75
stomach, adult.CNhs10503.33-1H610.50
stomach, embryo E12.CNhs10588.356-43E317.24
stomach, embryo E15.CNhs10603.1252-16G819.72
stomach, embryo E16.CNhs11022.459-17D419.98
stomach, embryo E17.CNhs11006.1035-18D520.28
stomach, embryo E18.CNhs10999.1286-20C616.81
stomach, neonate N03.CNhs11193.1340-24B826.70
stomach, neonate N07.CNhs11210.718-18A928.18
stomach, neonate N25.CNhs11104.1355-25E429.05
stomach, neonate N30.CNhs11134.1386-42I133.57
submandibular gland, adult.CNhs10469.59-29C134.80
testis, adult.CNhs10504.57-7G537.20
testis, embryo E13.CNhs11031.389-23F523.18
testis, embryo E15.CNhs11034.443-27C517.87
testis, embryo E16.CNhs11033.470-26G521.00
testis, embryo E17.CNhs11029.486-18I521.31
testis, embryo E18.CNhs11027.503-18G518.92
testis, neonate N00.CNhs11189.1300-22B726.52
testis, neonate N07.CNhs11222.726-26I429.43
testis, neonate N10.CNhs11204.763-44D944.25
testis, neonate N20.CNhs11110.839-18H346.14
testis, neonate N30.CNhs11130.1391-42E237.44
thymus, adult.CNhs10471.38-12B540.45
thymus, embryo E14.CNhs11041.402-44I415.41
thymus, embryo E15.CNhs11005.430-45I216.02
thymus, embryo E16.CNhs11002.456-26C518.19
thymus, embryo E17.CNhs10581.478-18C127.21
thymus, embryo E18.CNhs10595.1273-19G430.80
thymus, neonate N02.CNhs11181.1541-43F830.17
thymus, neonate N03.CNhs11137.2104-43C726.73
thymus, neonate N06.CNhs11197.681-26C432.21
thymus, neonate N07.CNhs11211.713-19D332.31
thymus, neonate N10.CNhs11194.748-24E430.95
thymus, neonate N20.CNhs11186.820-7A238.79
thymus, neonate N25.CNhs11125.1362-25G736.18
thymus, neonate N30.CNhs11132.1393-42G238.34
tongue, adult.CNhs10499.32-1B435.37
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H313.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.52
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.91
urinary bladder, adult.CNhs10481.879-12E436.51
uterus, adult pregnant day19.CNhs10497.590-15F535.28
uterus, adult.CNhs10509.92-27E531.32
vagina, adult.CNhs10502.89-27D532.37
vesicular gland, adult.CNhs10491.51-27F836.61
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A137.27
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A237.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A447.27
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A545.32
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A631.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A733.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A835.35
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A945.56
whole body, embryo E11.CNhs11014.324-5I819.30
whole body, embryo E12.CNhs10587.857-27C935.51
whole body, embryo E13.CNhs10512.372-23H222.54
whole body, embryo E14.5.CNhs10578.420-27D225.28
whole body, embryo E14.CNhs10519.395-14B121.17
whole body, embryo E16.CNhs10514.453-14F218.20
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.93
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.39
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G524.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G522.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G518.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G520.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G524.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G525.46
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G524.31
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G522.63
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G521.83
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.22
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G521.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G525.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G523.63
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G523.01
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G521.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.17
whole body, embryo E17.5.CNhs10513.490-9F924.50
whole body, embryo E17.CNhs10517.475-3I527.23
whole body, embryo E18.CNhs10516.493-3B319.88
whole body, neonate N00.CNhs10525.657-19C226.43
whole body, neonate N01.CNhs10576.659-23C621.81
whole body, neonate N06.CNhs10515.692-21D120.52
whole body, neonate N10.CNhs10518.761-6B419.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
adult organism2.31e-0951
ectoderm-derived structure1.29e-0895
ectoderm1.29e-0895
presumptive ectoderm1.29e-0895
ecto-epithelium5.63e-0873
regional part of nervous system6.98e-0854
brain1.68e-0747
future brain1.68e-0747
brain grey matter2.29e-0729
regional part of telencephalon2.29e-0729
telencephalon2.29e-0729
neural tube4.14e-0752
neural rod4.14e-0752
future spinal cord4.14e-0752
neural keel4.14e-0752
regional part of brain4.91e-0746
pre-chordal neural plate8.63e-0749
gray matter9.82e-0734







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