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FFCP PHASE1:Mm9::chr3:68813903..68813908,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=723949|HGNC=|MCL_coexpression_id=1434|UniProt=|association_with_transcript=79bp_to_NR_029735,uc012cql.1_5end|description=CAGE_peak_1_at_Mir16-2_5end|id=chr3:68813903..68813908,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,1.07e-07,32;CL:0002032,1.07e-07,32;CL:0000037,1.07e-07,32;CL:0000837,1.07e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.93e-09!45;UBERON:0003061!3.93e-09!45;UBERON:0002193!4.55e-09!48;UBERON:0004177!5.76e-09!29;UBERON:0002405!8.26e-08!70;UBERON:0000926!2.39e-07!193;UBERON:0004120!2.39e-07!193;UBERON:0006603!2.39e-07!193;UBERON:0005057!7.97e-07!51;UBERON:0001048!8.51e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.00e-16,45;UBERON:0003061,9.00e-16,45;UBERON:0002193,6.49e-15,48;UBERON:0002405,6.49e-15,48;UBERON:0004177,1.22e-13,29;UBERON:0005057,1.22e-13,29;UBERON:0000077,6.23e-10,35;UBERON:0001041,5.00e-09,80;UBERON:0002370,5.57e-09,23;UBERON:0000974,5.57e-09,23;UBERON:0004807,5.57e-09,23;UBERON:0005058,5.57e-09,23;UBERON:0003351,5.57e-09,23;UBERON:0009113,5.57e-09,23;UBERON:0003295,5.57e-09,23;UBERON:0009722,5.57e-09,23;UBERON:0005562,5.57e-09,23;UBERON:0007690,5.57e-09,23;UBERON:0000072,1.93e-08,27;UBERON:0006562,2.23e-08,24;UBERON:0003408,2.23e-08,24;UBERON:0001557,2.23e-08,24;UBERON:0001042,2.23e-08,24;UBERON:0008814,2.23e-08,24;UBERON:0009145,2.23e-08,24;UBERON:0003081,2.67e-08,87;UBERON:0000926,3.79e-07,120;UBERON:0004120,3.79e-07,120;UBERON:0006603,3.79e-07,120|phase1_expression=0.480446541314382,0,0,0,0,0,0,5.55230290798778,0.703943610758334,0,0.68487187290202,0.319088635981346,3.76641605848653,2.44777126773193,1.33243904726265,3.03712901084739,7.69518065940961,1.41957974411207,1.50825876966313,0.84877930359606,0.425216450755349,1.29078236561151,1.56719873483361,0.319984845586813,0.68822784320151,0,0,0,0.380046838912748,0,0.443461021310609,0.635030673459631,0,0,0.577703239502549,0.997407872150954,0.612508068787107,4.18531630736908,1.5626706890476,5.23523743973798,2.35292595212406,2.73218193983378,3.39857247121808,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0.838913030288682,2.90144856804538,2.68875039313971,0,0.573066879877513,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0.725827286159344,0.270011876663381,0,0.285650984403804,0.220868540951614,0.122490799214954,0.670918297127655,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0,0.372798891650601,0.227178579999552,0.453429360640713,0,0,0,0,0,0.448026887097336,0.280888840263504,0.511290967734173,0,0.35333957451034,0.422530259330042,1.28326477414318,0,0,0.649473123033642,1.26679932737549,1.01104889002957,0.5709193985953,1.03575153458869,0.148442139064825,1.56136794089522,0.608930956624282,0.461230994512117,0.150722640552623,0.823120949949934,0.251333182659351,0.494389935468748,0,0.884610551949874,0.323533699894818,2.87093973998512,1.45462575940567,0,0,0,0.255457055208591,2.03685711660064,1.79970819298022,2.28726408731516,0,0,0.251308704225729,0,0,0,0,0.305518091550949,0.870848794270651,0,0,1.43132487258974,0.919608417733892,0.180062129805349,2.10986744970001,1.29269348387523,1.66547836370305,0.281105173679186,0.776110112217047,0.431135985865684,0.945530400839096,0.175951124163949,0,1.11218899690239,0.348252166522167,0,1.59227413454795,3.51106593656617,1.02939162845886,2.27330799516474,0.621377317606506,1.40715635988658,1.2604344302271,0.710234206755631,1.77087808572663,2.46827380619805,2.09280550275367,0.536546802799238,0.817357396570186,0.493679549740441,1.14917224855367,0.0810688095458557,0.146199987425332,0.439100230582101,0.939444931322602,0.210289948564127,0.205809224758569,0.330418782983798,0.264450566663544,1.70630600428187,1.39342003116263,0.128867461322093,0.80673409849337,0.667134131534611,0.190225626112559,0,0,1.00534083520108,0.795825888164603,1.16978452271472,0,1.08069024937347,0.597423819763102,0.189667900953082,1.37098215131675,0,1.83286195060783,0.775809948670503,0.420814919341911,0.569128834118316,0.147610147979602,0.627994911365499,0,0,0.83422552858047,1.96558995113203,2.69834534861824,2.02860121388503,1.92941727801933,2.5462585178142,0.287696137450811,4.86405680325106,1.92192989231657,11.5014565221884,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0,0.369506380333209,0.37898282354097,0.325929952884052,2.20668611507745,1.64283173801951,0,0.476087281772027,0.390267295715598,0.157635144106191,1.32878813789265,0.478364305972461,0.983179888294428,1.38147985492716,0.433947175744535,1.50791283939272,2.17562273527484,0.983528546038072,0.275936746304732,0,0,0.327869890753351,0,0.94652465824877,1.56175497718655,1.50796378412959,0.716906393857656,0.668396022247182,0.566153061577665,0.809621403349789,1.16902343164525,1.58115111178609,0,0.283880170416537,0.35613120733451,0.651547837414304,0.164970122972535,0,1.21390318077491,0.604647113929502,0.377210159511796,0,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0.720244376125241,0.129358683782755,0.643011105094777,0,0.356737635204141,0.329098041204242,0,0.704015124191131,0,0,0.32977250588296,0.484393280087717,0.361877549568935,1.07435109602823,0.984845398470368,0.291480836629851,0.18542530201051,3.75915937755276,1.23832120777933,3.1483069652851,9.04168593622517,5.46776910884101,4.34678529092393,0.679913719975421,0.839708713941948,1.79659965945751,0,0.790839983952838,0.609958401380546,1.62008011232702,1.04544148007234,1.31017538247707,1.61837215661785,0.661227645802687,0,0.518459893167171,0.621339313086926,0.56369293868419,0.897099276263873,0.992750942742586,0.972255941720238,0.774958940866387,1.520605129417,1.87771581833206,0.781226309063701,0.314578033277133,3.38217769156408,1.72818003754719,4.4241556887945,0.202725215290164,2.05421914329655,4.54722880422283,1.9692936523423,2.58285761215644,4.92801343031872,6.05527061415767,2.92802704849628,4.72482201260999,12.6032731421051,4.87289403698762,4.32953287381483,6.42822961998629,0.226730383615211,0.443971906748129,0.62799699626633,0.335769232728157,0,0.375364950902364,0,0.857473516316263,1.00314420807073,0,0,0,0.171853182343688,1.37016503954128,0,0,0,0.453142408984205,0,0.518936737920883,0,0.170733605754134,0.729320151204882,0,0,1.11123363900808,0,0.962757628775446,0.505394423527595,0.760437899670719,0.565879024158229,0.280924522409647,0.256100609619477,0.114870937911227,0.952587382566147,0.579421629724277,0.578727661391115,0,0.735994600671987,2.40008476669791,1.59728225543404,1.43061713968393,1.16277133305863,0.752875043322645,0.338458431566706,0.365855945745545,1.8414879800649,0.407412341537585,0,0.593175090620871,0.0985044823755635,1.22769312950907,0.154936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,1.15933917810211|short_description=p1@Mir16-2}}
|EntrezGene=723949
|HGNC=
|MCL_coexpression_id=1434
|UniProt=
|association_with_transcript=79bp_to_NR_029735,uc012cql.1_5end
|description=CAGE_peak_1_at_Mir16-2_5end
|id=chr3:68813903..68813908,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000988,1.07e-07,32;CL:0002032,1.07e-07,32;CL:0000037,1.07e-07,32;CL:0000837,1.07e-07,32
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002390!3.93e-09!45;UBERON:0003061!3.93e-09!45;UBERON:0002193!4.55e-09!48;UBERON:0004177!5.76e-09!29;UBERON:0002405!8.26e-08!70;UBERON:0000926!2.39e-07!193;UBERON:0004120!2.39e-07!193;UBERON:0006603!2.39e-07!193;UBERON:0005057!7.97e-07!51;UBERON:0001048!8.51e-07!147
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.00e-16,45;UBERON:0003061,9.00e-16,45;UBERON:0002193,6.49e-15,48;UBERON:0002405,6.49e-15,48;UBERON:0004177,1.22e-13,29;UBERON:0005057,1.22e-13,29;UBERON:0000077,6.23e-10,35;UBERON:0001041,5.00e-09,80;UBERON:0002370,5.57e-09,23;UBERON:0000974,5.57e-09,23;UBERON:0004807,5.57e-09,23;UBERON:0005058,5.57e-09,23;UBERON:0003351,5.57e-09,23;UBERON:0009113,5.57e-09,23;UBERON:0003295,5.57e-09,23;UBERON:0009722,5.57e-09,23;UBERON:0005562,5.57e-09,23;UBERON:0007690,5.57e-09,23;UBERON:0000072,1.93e-08,27;UBERON:0006562,2.23e-08,24;UBERON:0003408,2.23e-08,24;UBERON:0001557,2.23e-08,24;UBERON:0001042,2.23e-08,24;UBERON:0008814,2.23e-08,24;UBERON:0009145,2.23e-08,24;UBERON:0003081,2.67e-08,87;UBERON:0000926,3.79e-07,120;UBERON:0004120,3.79e-07,120;UBERON:0006603,3.79e-07,120
|phase1_expression=0.480446541314382,0,0,0,0,0,0,5.55230290798778,0.703943610758334,0,0.68487187290202,0.319088635981346,3.76641605848653,2.44777126773193,1.33243904726265,3.03712901084739,7.69518065940961,1.41957974411207,1.50825876966313,0.84877930359606,0.425216450755349,1.29078236561151,1.56719873483361,0.319984845586813,0.68822784320151,0,0,0,0.380046838912748,0,0.443461021310609,0.635030673459631,0,0,0.577703239502549,0.997407872150954,0.612508068787107,4.18531630736908,1.5626706890476,5.23523743973798,2.35292595212406,2.73218193983378,3.39857247121808,0.251793635951155,0,0.183546752161682,0,0,0,0,0,0,0.838913030288682,2.90144856804538,2.68875039313971,0,0.573066879877513,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0.725827286159344,0.270011876663381,0,0.285650984403804,0.220868540951614,0.122490799214954,0.670918297127655,0,0,0,0.153606533256243,0,0,0,0.279182999001381,0,0.15279824777681,0.294628585473668,0,0.372798891650601,0.227178579999552,0.453429360640713,0,0,0,0,0,0.448026887097336,0.280888840263504,0.511290967734173,0,0.35333957451034,0.422530259330042,1.28326477414318,0,0,0.649473123033642,1.26679932737549,1.01104889002957,0.5709193985953,1.03575153458869,0.148442139064825,1.56136794089522,0.608930956624282,0.461230994512117,0.150722640552623,0.823120949949934,0.251333182659351,0.494389935468748,0,0.884610551949874,0.323533699894818,2.87093973998512,1.45462575940567,0,0,0,0.255457055208591,2.03685711660064,1.79970819298022,2.28726408731516,0,0,0.251308704225729,0,0,0,0,0.305518091550949,0.870848794270651,0,0,1.43132487258974,0.919608417733892,0.180062129805349,2.10986744970001,1.29269348387523,1.66547836370305,0.281105173679186,0.776110112217047,0.431135985865684,0.945530400839096,0.175951124163949,0,1.11218899690239,0.348252166522167,0,1.59227413454795,3.51106593656617,1.02939162845886,2.27330799516474,0.621377317606506,1.40715635988658,1.2604344302271,0.710234206755631,1.77087808572663,2.46827380619805,2.09280550275367,0.536546802799238,0.817357396570186,0.493679549740441,1.14917224855367,0.0810688095458557,0.146199987425332,0.439100230582101,0.939444931322602,0.210289948564127,0.205809224758569,0.330418782983798,0.264450566663544,1.70630600428187,1.39342003116263,0.128867461322093,0.80673409849337,0.667134131534611,0.190225626112559,0,0,1.00534083520108,0.795825888164603,1.16978452271472,0,1.08069024937347,0.597423819763102,0.189667900953082,1.37098215131675,0,1.83286195060783,0.775809948670503,0.420814919341911,0.569128834118316,0.147610147979602,0.627994911365499,0,0,0.83422552858047,1.96558995113203,2.69834534861824,2.02860121388503,1.92941727801933,2.5462585178142,0.287696137450811,4.86405680325106,1.92192989231657,11.5014565221884,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0,0.369506380333209,0.37898282354097,0.325929952884052,2.20668611507745,1.64283173801951,0,0.476087281772027,0.390267295715598,0.157635144106191,1.32878813789265,0.478364305972461,0.983179888294428,1.38147985492716,0.433947175744535,1.50791283939272,2.17562273527484,0.983528546038072,0.275936746304732,0,0,0.327869890753351,0,0.94652465824877,1.56175497718655,1.50796378412959,0.716906393857656,0.668396022247182,0.566153061577665,0.809621403349789,1.16902343164525,1.58115111178609,0,0.283880170416537,0.35613120733451,0.651547837414304,0.164970122972535,0,1.21390318077491,0.604647113929502,0.377210159511796,0,0,0.258428293168221,0.727067458955011,0.712994756769443,0.632073515871632,0,0,0,0.720244376125241,0.129358683782755,0.643011105094777,0,0.356737635204141,0.329098041204242,0,0.704015124191131,0,0,0.32977250588296,0.484393280087717,0.361877549568935,1.07435109602823,0.984845398470368,0.291480836629851,0.18542530201051,3.75915937755276,1.23832120777933,3.1483069652851,9.04168593622517,5.46776910884101,4.34678529092393,0.679913719975421,0.839708713941948,1.79659965945751,0,0.790839983952838,0.609958401380546,1.62008011232702,1.04544148007234,1.31017538247707,1.61837215661785,0.661227645802687,0,0.518459893167171,0.621339313086926,0.56369293868419,0.897099276263873,0.992750942742586,0.972255941720238,0.774958940866387,1.520605129417,1.87771581833206,0.781226309063701,0.314578033277133,3.38217769156408,1.72818003754719,4.4241556887945,0.202725215290164,2.05421914329655,4.54722880422283,1.9692936523423,2.58285761215644,4.92801343031872,6.05527061415767,2.92802704849628,4.72482201260999,12.6032731421051,4.87289403698762,4.32953287381483,6.42822961998629,0.226730383615211,0.443971906748129,0.62799699626633,0.335769232728157,0,0.375364950902364,0,0.857473516316263,1.00314420807073,0,0,0,0.171853182343688,1.37016503954128,0,0,0,0.453142408984205,0,0.518936737920883,0,0.170733605754134,0.729320151204882,0,0,1.11123363900808,0,0.962757628775446,0.505394423527595,0.760437899670719,0.565879024158229,0.280924522409647,0.256100609619477,0.114870937911227,0.952587382566147,0.579421629724277,0.578727661391115,0,0.735994600671987,2.40008476669791,1.59728225543404,1.43061713968393,1.16277133305863,0.752875043322645,0.338458431566706,0.365855945745545,1.8414879800649,0.407412341537585,0,0.593175090620871,0.0985044823755635,1.22769312950907,0.154936841185966,0.578719832943424,0,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,1.15933917810211
|short_description=p1@Mir16-2
}}

Revision as of 02:29, 14 September 2013

Short description:p1@Mir16-2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mir16-2_5end
Coexpression cluster:MCL_coexpression_mm9:1434
Association with transcript: 79bp_to_NR_029735, uc012cql.1_5end
EntrezGene:Mir16-2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mir16-2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.32
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.77
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.57
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.40
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A62.87
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.04
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.29
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.27
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.57
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.03
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F44.86
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.21
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G23.76
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D19.04
spleen, neonate N20.CNhs11112.824-19H15.47
spleen, neonate N25.CNhs11099.1354-25G34.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.80
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A90.66
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I22.05
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F84.93
thymus, neonate N03.CNhs11137.2104-43C76.06
thymus, neonate N06.CNhs11197.681-26C42.93
thymus, neonate N07.CNhs11211.713-19D34.72
thymus, neonate N10.CNhs11194.748-24E412.60
thymus, neonate N20.CNhs11186.820-7A24.87
thymus, neonate N25.CNhs11125.1362-25G74.33
thymus, neonate N30.CNhs11132.1393-42G26.43
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hematopoietic system9.00e-1645
blood island9.00e-1645
hemolymphoid system6.49e-1548
immune system6.49e-1548
hemopoietic organ1.22e-1329
immune organ1.22e-1329
mixed endoderm/mesoderm-derived structure6.23e-1035
foregut5.00e-0980
thymus5.57e-0923
neck5.57e-0923
respiratory system epithelium5.57e-0923
hemolymphoid system gland5.57e-0923
pharyngeal epithelium5.57e-0923
thymic region5.57e-0923
pharyngeal gland5.57e-0923
entire pharyngeal arch endoderm5.57e-0923
thymus primordium5.57e-0923
early pharyngeal endoderm5.57e-0923
segment of respiratory tract1.93e-0827
pharynx2.23e-0824
gland of gut2.23e-0824
upper respiratory tract2.23e-0824
chordate pharynx2.23e-0824
pharyngeal arch system2.23e-0824
pharyngeal region of foregut2.23e-0824
lateral plate mesoderm2.67e-0887
mesoderm3.79e-07120
mesoderm-derived structure3.79e-07120
presumptive mesoderm3.79e-07120







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