FFCP PHASE1:Mm9::chr4:140256517..140256528,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=108911|HGNC=|MCL_coexpression_id=64|UniProt=Q8BK67|association_with_transcript=61bp_to_ENSMUST00000071169_5end|description=CAGE_peak_7_at_Rcc2_5end|id=chr4:140256517..140256528,+|ontology_enrichment_celltype=CL:0002320!6.59e-11!46;CL:0000134!6.59e-11!46;CL:0000988!2.51e-10!32;CL:0002032!2.51e-10!32;CL:0000037!2.51e-10!32;CL:0000566!2.51e-10!32;CL:0000837!2.51e-10!32;CL:0000049!3.72e-09!19;CL:0000219!1.47e-08!54;CL:0000763!5.25e-07!16;CL:0002031!6.09e-07!25|ontology_enrichment_celltype_v019_2=CL:0002320,3.32e-16,46;CL:0000134,3.32e-16,46;CL:0000049,3.11e-15,19;CL:0000988,1.78e-14,32;CL:0002032,1.78e-14,32;CL:0000037,1.78e-14,32;CL:0000837,1.78e-14,32;CL:0000219,2.90e-13,54;CL:0000764,6.16e-11,3;CL:0000765,6.16e-11,3;CL:0000038,6.16e-11,3;CL:0000547,6.16e-11,3;CL:0000763,3.63e-09,16;CL:0000034,8.69e-09,97;CL:0000557,2.06e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,6.16e-11,3;DOID:0060083,6.16e-11,3;DOID:1240,6.16e-11,3|ontology_enrichment_uberon=UBERON:0002390!1.34e-12!45;UBERON:0003061!1.34e-12!45;UBERON:0002193!9.78e-12!48;UBERON:0002405!2.50e-11!70;UBERON:0002384!6.59e-11!46;UBERON:0003081!5.00e-08!88;UBERON:0004177!2.90e-07!29;UBERON:0005057!6.80e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.32e-16,46|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.34243593645101,0.319088635981346,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.822686601634433,0,0.255129870453209,2.97872853602656,1.82839852397255,0,0,0,0,0,0,0,0,3.81018404075779,4.30545351309199,15.8481681015439,0,0,0,0,0.7813353445238,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0,0,0,0,4.19456515144341,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.302904773332736,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.681721290312231,1.03914401841148,1.06001872353102,0,0,0,0,0,0,0.505524445014783,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0,0,3.11519323715393,1.19980546198682,2.54140454146129,0,0,0,0.173824320192276,0,0.62336413367868,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.281105173679186,0,0.431135985865684,0,0,0,0,0,0,0.59710280045548,2.80885274925294,2.83082697826187,2.55747149456033,0.207125772535502,0.234526059981096,0,0,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0.123397163921801,0,1.50160595144485,1.57247196090562,1.57403478669398,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.972811360650212,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0.275936746304732,0.481651769963376,0.234423373184406,1.3114795630134,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,1.17335854031855,0.63549621259146,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.238744688006273,0,0,0,0.512612642393558,0.206386867963223,1.11116716421827,1.13021074202815,0.683471138605126,0.228778173206523,2.20971958992012,1.39951452323658,3.04039942369732,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0.524296722128554,0.483168241652012,0,0.632022241256357,0.202725215290164,0.924398614483445,1.03936658382236,1.43221356533985,0.79472541912506,0.120195449519969,0.590758108698309,0.403865799792591,0.381034033274999,0.604957110821043,0.487289403698762,0.384847366561318,0.233753804363138,0.680191150845634,0,0,0.167884616364078,0.386379188064381,0.750729901804728,0,0.214368379079066,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p7@Rcc2}} | ||
|EntrezGene=108911 | |||
|HGNC= | |||
|MCL_coexpression_id=64 | |||
|UniProt=Q8BK67 | |||
|association_with_transcript=61bp_to_ENSMUST00000071169_5end | |||
|description=CAGE_peak_7_at_Rcc2_5end | |||
|id=chr4:140256517..140256528,+ | |||
|ontology_enrichment_celltype=CL:0002320!6.59e-11!46;CL:0000134!6.59e-11!46;CL:0000988!2.51e-10!32;CL:0002032!2.51e-10!32;CL:0000037!2.51e-10!32;CL:0000566!2.51e-10!32;CL:0000837!2.51e-10!32;CL:0000049!3.72e-09!19;CL:0000219!1.47e-08!54;CL:0000763!5.25e-07!16;CL:0002031!6.09e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,3.32e-16,46;CL:0000134,3.32e-16,46;CL:0000049,3.11e-15,19;CL:0000988,1.78e-14,32;CL:0002032,1.78e-14,32;CL:0000037,1.78e-14,32;CL:0000837,1.78e-14,32;CL:0000219,2.90e-13,54;CL:0000764,6.16e-11,3;CL:0000765,6.16e-11,3;CL:0000038,6.16e-11,3;CL:0000547,6.16e-11,3;CL:0000763,3.63e-09,16;CL:0000034,8.69e-09,97;CL:0000557,2.06e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.16e-11,3;DOID:0060083,6.16e-11,3;DOID:1240,6.16e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.34e-12!45;UBERON:0003061!1.34e-12!45;UBERON:0002193!9.78e-12!48;UBERON:0002405!2.50e-11!70;UBERON:0002384!6.59e-11!46;UBERON:0003081!5.00e-08!88;UBERON:0004177!2.90e-07!29;UBERON:0005057!6.80e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.32e-16,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0.34243593645101,0.319088635981346,0,0.0874204024189974,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.822686601634433,0,0.255129870453209,2.97872853602656,1.82839852397255,0,0,0,0,0,0,0,0,3.81018404075779,4.30545351309199,15.8481681015439,0,0,0,0,0.7813353445238,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0,0,0,0,0,4.19456515144341,0.725362142011344,0.672187598284928,0,0,0,0,0,0,0.338844532069132,0,0.449949858640699,1.97773272513395,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0.302904773332736,0.151143120213571,0.289864488701678,0,0,0,0,0,0,0.681721290312231,1.03914401841148,1.06001872353102,0,0,0,0,0,0,0.505524445014783,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0,0,3.11519323715393,1.19980546198682,2.54140454146129,0,0,0,0.173824320192276,0,0.62336413367868,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0.281105173679186,0,0.431135985865684,0,0,0,0,0,0,0.59710280045548,2.80885274925294,2.83082697826187,2.55747149456033,0.207125772535502,0.234526059981096,0,0,0,0.308534225774757,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0.379335801906163,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0,0,0,0.123397163921801,0,1.50160595144485,1.57247196090562,1.57403478669398,0.202860121388503,0.482354319504834,0.50925170356284,0.287696137450811,0.972811360650212,0.274561413188081,0,0,0,0,0,0.482443521363367,0,0,0.162964976442026,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0.275936746304732,0.481651769963376,0.234423373184406,1.3114795630134,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.494910368917606,0,0,0,0,0,0,0,0,0,0.316036757935816,1.05418608574999,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,1.17335854031855,0.63549621259146,0,0.16488625294148,0.322928853391811,0.0603129249281559,0.238744688006273,0,0,0,0.512612642393558,0.206386867963223,1.11116716421827,1.13021074202815,0.683471138605126,0.228778173206523,2.20971958992012,1.39951452323658,3.04039942369732,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.165306911450672,0.26175594198403,0,0,0,0.299033092087958,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.39061315453185,0.524296722128554,0.483168241652012,0,0.632022241256357,0.202725215290164,0.924398614483445,1.03936658382236,1.43221356533985,0.79472541912506,0.120195449519969,0.590758108698309,0.403865799792591,0.381034033274999,0.604957110821043,0.487289403698762,0.384847366561318,0.233753804363138,0.680191150845634,0,0,0.167884616364078,0.386379188064381,0.750729901804728,0,0.214368379079066,0.501572104035363,0,0,0,0.343706364687375,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p7@Rcc2 | |||
}} |
Revision as of 04:17, 14 September 2013
Short description: | p7@Rcc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Rcc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 61bp_to_ENSMUST00000071169_5end |
EntrezGene: | Rcc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 3.32e-16 | 46 |
mesenchymal cell | 3.32e-16 | 46 |
common myeloid progenitor | 3.11e-15 | 19 |
hematopoietic cell | 1.78e-14 | 32 |
hematopoietic oligopotent progenitor cell | 1.78e-14 | 32 |
hematopoietic stem cell | 1.78e-14 | 32 |
hematopoietic multipotent progenitor cell | 1.78e-14 | 32 |
motile cell | 2.90e-13 | 54 |
erythroid lineage cell | 6.16e-11 | 3 |
erythroblast | 6.16e-11 | 3 |
erythroid progenitor cell | 6.16e-11 | 3 |
proerythroblast | 6.16e-11 | 3 |
myeloid cell | 3.63e-09 | 16 |
stem cell | 8.69e-09 | 97 |
granulocyte monocyte progenitor cell | 2.06e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.32e-16 | 46 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.16e-11 | 3 |
immune system cancer | 6.16e-11 | 3 |
leukemia | 6.16e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.