FFCP PHASE1:Hg19::chr9:114937528..114937541,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64420|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25413|TSSclassifier=S|UniProt=|association_with_transcript=5bp_to_ENST00000374264_5end|description=CAGE_peak_7_at_SUSD1_5end|id=chr9:114937528..114937541,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0004161;8.39e-09;11!UBERON:0009497;2.10e-07;13|ontology_enrichment_disease=DOID:162!9.15e-14!235;DOID:14566!1.82e-13!239;DOID:305!4.61e-10!106;DOID:0050687!1.30e-08!143|ontology_enrichment_disease_v019=DOID:1036;2.04e-18;8!DOID:8692;2.27e-16;31!DOID:1240;2.58e-10;39!DOID:2531;4.62e-07;51!DOID:0060083;4.62e-07;51|ontology_enrichment_disease_v019_2=DOID:1036,1.30e-18,8;DOID:8692,5.70e-17,31;DOID:1240,5.99e-13,39;DOID:2531,2.67e-09,51;DOID:0060083,2.67e-09,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-16;15!UBERON:0000179;1.67e-16;15!UBERON:0000463;1.67e-16;15!UBERON:0001052;1.37e-09;4!UBERON:0004907;9.31e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-16,15;UBERON:0000179,1.10e-16,15;UBERON:0000463,1.10e-16,15;UBERON:0001052,1.11e-09,4;UBERON:0004907,7.91e-08,5|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,1.18009283054671,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0,0.880801318004542,0,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0.28769239232215,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0,0,0.212604299965044,0,0,0.300353785683013,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,1.31692042387539,0,0.393010762749165,0.411202997999018,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0.390178042679635,0,0.276350017785848,0.289803085735052,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.403213486449465,0.802320587350522,0.144824403882799,0,0,0.639312809217652,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.0654895377488563,0,0,0,0,0.26591592103773,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0.860509862246441,0.354668382198357,1.68203280042692,0,0.74000264525148,0,0.269421344139376,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.125118519871964,0,0,0,0,0.340296549480063,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0.545492241181669,0.286804595389004,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0,0.71181185733329,0.134831308160164,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,1.47586126251736,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0.115930404975077,0.587043471179108,0,0,0,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,3.94130590316755,2.55340458638356,0.829312462163088,0.144119953416961,0.50496973370552,0.063497894292169,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,2.1100756394171,0.871533458600294,1.69954085009497,0,0,0,0.239624855491583,0,0,0,0,0,0.448340575974109,0.591092280605782,0.862510299438069,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.215714200818617,0.426910231213777,0.606255142892519,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.164254312027618,0,0.116210378459959,1.0877350463246,0,0,0.229628896329213,0,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0.657779629937804,0.784306353074702,0,0.656029291399411,0.650756789328606,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.576570202095319,0,0.2023155617111,0,0.62962469366128,0,0.308033580176089,0,0,0,0.572499546967965,0,0.316379424718726,0,0.255897791311334,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.404364963146632,0,0.421258456238981,0,0,1.05650146756755,0,0,0,0,0,0,0,0,0.405820753925408,0.30982349809975,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.52234282769651,2.29391162142713,1.70894156152249,1.66762242820452,0.411362273086194,3.8908398671563,2.70015718619057,3.17250070517708,0,0,0.735120647943095,0,0,0.0711418433484141,0.318852545457645,0.199579371432817,0,0.211673582723883,0,0.842391534340376,0,0,2.50634477090067,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0.278406173895242,1.23087398947712,2.70455678475983,1.33228787199128,9.86909035614947,0.561421621224659,0,0,0,0.852408440419239,0,0,0.3071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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64420 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25413 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENST00000374264_5end | |||
|description=CAGE_peak_7_at_SUSD1_5end | |||
|id=chr9:114937528..114937541,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.39e-09;11!UBERON:0009497;2.10e-07;13 | |||
|ontology_enrichment_disease=DOID:162!9.15e-14!235;DOID:14566!1.82e-13!239;DOID:305!4.61e-10!106;DOID:0050687!1.30e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.04e-18;8!DOID:8692;2.27e-16;31!DOID:1240;2.58e-10;39!DOID:2531;4.62e-07;51!DOID:0060083;4.62e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.30e-18,8;DOID:8692,5.70e-17,31;DOID:1240,5.99e-13,39;DOID:2531,2.67e-09,51;DOID:0060083,2.67e-09,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-16;15!UBERON:0000179;1.67e-16;15!UBERON:0000463;1.67e-16;15!UBERON:0001052;1.37e-09;4!UBERON:0004907;9.31e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.10e-16,15;UBERON:0000179,1.10e-16,15;UBERON:0000463,1.10e-16,15;UBERON:0001052,1.11e-09,4;UBERON:0004907,7.91e-08,5 | |||
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| |||
|short_description=p7@SUSD1 | |||
}} |
Revision as of 07:00, 14 September 2013
Short description: | p7@SUSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SUSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000374264_5end |
EntrezGene: | SUSD1 |
HGNC: | 25413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.10e-16 | 15 |
haemolymphatic fluid | 1.10e-16 | 15 |
organism substance | 1.10e-16 | 15 |
rectum | 1.11e-09 | 4 |
lower digestive tract | 7.91e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.30e-18 | 8 |
myeloid leukemia | 5.70e-17 | 31 |
leukemia | 5.99e-13 | 39 |
hematologic cancer | 2.67e-09 | 51 |
immune system cancer | 2.67e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.