FFCP PHASE1:Hg19::chr9:36258501..36258504,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10020|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23657|TSSclassifier=S|UniProt=Q9Y223,A7UNU7,B7Z372,F5H499|association_with_transcript=-5bp_to_ENST00000377902,NM_001190383,NM_001190384,NM_005476_5end|description=CAGE_peak_7_at_GNE_5end|id=chr9:36258501..36258504,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;2.07e-10;1!CL:0002625;2.07e-10;1!CL:0000228;2.07e-10;1!CL:0000216;2.07e-10;1!CL:0002372;2.07e-10;1|ontology_enrichment_celltype_v019_2=CL:0000511,1.08e-10,1;CL:0002625,1.08e-10,1;CL:0000216,1.08e-10,1;CL:0000228,1.43e-10,1;CL:0002372,1.43e-10,1|ontology_enrichment_development_v019=UBERON:0000358;7.38e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:9119;2.07e-10;1|ontology_enrichment_disease_v019_2=DOID:9119,1.57e-10,1|ontology_enrichment_uberon=UBERON:0000073!1.95e-12!94;UBERON:0001016!1.95e-12!94;UBERON:0000924!5.02e-12!173;UBERON:0006601!5.02e-12!173;UBERON:0004121!7.83e-12!169;UBERON:0005743!2.47e-10!86;UBERON:0001017!1.46e-09!82;UBERON:0002346!1.30e-08!90;UBERON:0003075!1.76e-08!86;UBERON:0007284!1.76e-08!86;UBERON:0000955!9.21e-08!69;UBERON:0006238!9.21e-08!69;UBERON:0000033!2.10e-07!123;UBERON:0000483!4.76e-07!309;UBERON:0000119!6.72e-07!312;UBERON:0000153!8.12e-07!129;UBERON:0007811!8.12e-07!129|ontology_enrichment_uberon_v019=UBERON:0001136;2.07e-10;1!UBERON:0001389;2.07e-10;1!UBERON:0001343;2.07e-10;1!UBERON:0000026;2.07e-10;1!UBERON:0008784;2.07e-10;1!UBERON:0006058;2.07e-10;1!UBERON:0003663;2.07e-10;1!UBERON:0004256;2.07e-10;1!UBERON:0004708;2.07e-10;1!UBERON:0002101;2.07e-10;1!UBERON:0004709;2.07e-10;1!UBERON:0002529;2.07e-10;1!UBERON:0010538;2.07e-10;1!UBERON:0003661;2.07e-10;1!UBERON:0010890;2.07e-10;1!UBERON:0002471;2.07e-10;1!UBERON:0001383;2.07e-10;1!UBERON:0004910;2.07e-10;1!UBERON:0010758;2.07e-10;1!UBERON:0010707;2.07e-10;1!UBERON:0004813;2.07e-10;1!UBERON:0000978;2.07e-10;1!UBERON:0002103;2.07e-10;1!UBERON:0001665;2.07e-10;1!UBERON:0003823;2.07e-10;1!UBERON:0000154;2.07e-10;1!UBERON:0010709;2.07e-10;1|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.08e-10,1;UBERON:0001343,1.08e-10,1;UBERON:0004910,1.08e-10,1;UBERON:0005154,1.08e-10,1;UBERON:0005295,1.08e-10,1;UBERON:0004813,1.08e-10,1;UBERON:0005297,1.08e-10,1;UBERON:0005294,1.08e-10,1;UBERON:0010141,1.08e-10,1;UBERON:0005891,1.08e-10,1;UBERON:0005418,1.89e-10,1;UBERON:0001389,1.89e-10,1;UBERON:0000026,1.89e-10,1;UBERON:0008784,1.89e-10,1;UBERON:0006058,1.89e-10,1;UBERON:0003663,1.89e-10,1;UBERON:0004256,1.89e-10,1;UBERON:0004708,1.89e-10,1;UBERON:0002101,1.89e-10,1;UBERON:0004709,1.89e-10,1;UBERON:0002529,1.89e-10,1;UBERON:0010538,1.89e-10,1;UBERON:0003661,1.89e-10,1;UBERON:0010890,1.89e-10,1;UBERON:0002471,1.89e-10,1;UBERON:0001383,1.89e-10,1;UBERON:0004357,1.89e-10,1;UBERON:0004347,1.89e-10,1;UBERON:0005420,1.89e-10,1;UBERON:0005732,1.89e-10,1;UBERON:0010758,1.89e-10,1;UBERON:0010707,1.89e-10,1;UBERON:0000978,1.89e-10,1;UBERON:0002103,1.89e-10,1;UBERON:0001665,1.89e-10,1;UBERON:0003823,1.89e-10,1;UBERON:0000154,1.89e-10,1;UBERON:0010709,1.89e-10,1;UBERON:0005733,1.89e-10,1;UBERON:0005730,1.89e-10,1|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0.495065411840187,0,0,0,0,0.487932798790507,0.369363174230364,0.612002073732759,0,0,0.136874425072884,0.125542639594803,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.46480320348181,0.568676929949686,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.189069634328136,0.221729397462564,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,1.52054421143703,0.24406205754817,0,0,0.0892997282840798,0,0.450445921933289,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.529636723252875,0.573673241497627,0,0,0,0,0,0.134710672069688,0.490385709340376,0.151357427644931,0,0,0.936480230490962,0,0,0.117434498643765,0.161872944368132,0.561803226808994,0,0.368502951935304,0.103325781175765,0,0,0,0,0,0.375355559615893,0.277064115484183,0,0.612975591598039,0.45071417671979,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0.292311015483596,0.252433774244115,0.276149695926898,0,0.710019185033229,0.403008392910561,0.169560592310488,0,0.545492241181669,0.286804595389004,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0.168584690078102,0.482022059766964,0.330881918197182,0.217879444092406,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0.8231480226628,0,0,0,1.18157981336281,0,0,0.343135620597051,0.219500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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10020 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23657 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y223,A7UNU7,B7Z372,F5H499 | |||
|association_with_transcript=-5bp_to_ENST00000377902,NM_001190383,NM_001190384,NM_005476_5end | |||
|description=CAGE_peak_7_at_GNE_5end | |||
|id=chr9:36258501..36258504,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.07e-10;1!CL:0002625;2.07e-10;1!CL:0000228;2.07e-10;1!CL:0000216;2.07e-10;1!CL:0002372;2.07e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.08e-10,1;CL:0002625,1.08e-10,1;CL:0000216,1.08e-10,1;CL:0000228,1.43e-10,1;CL:0002372,1.43e-10,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;7.38e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;2.07e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.57e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.95e-12!94;UBERON:0001016!1.95e-12!94;UBERON:0000924!5.02e-12!173;UBERON:0006601!5.02e-12!173;UBERON:0004121!7.83e-12!169;UBERON:0005743!2.47e-10!86;UBERON:0001017!1.46e-09!82;UBERON:0002346!1.30e-08!90;UBERON:0003075!1.76e-08!86;UBERON:0007284!1.76e-08!86;UBERON:0000955!9.21e-08!69;UBERON:0006238!9.21e-08!69;UBERON:0000033!2.10e-07!123;UBERON:0000483!4.76e-07!309;UBERON:0000119!6.72e-07!312;UBERON:0000153!8.12e-07!129;UBERON:0007811!8.12e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.07e-10;1!UBERON:0001389;2.07e-10;1!UBERON:0001343;2.07e-10;1!UBERON:0000026;2.07e-10;1!UBERON:0008784;2.07e-10;1!UBERON:0006058;2.07e-10;1!UBERON:0003663;2.07e-10;1!UBERON:0004256;2.07e-10;1!UBERON:0004708;2.07e-10;1!UBERON:0002101;2.07e-10;1!UBERON:0004709;2.07e-10;1!UBERON:0002529;2.07e-10;1!UBERON:0010538;2.07e-10;1!UBERON:0003661;2.07e-10;1!UBERON:0010890;2.07e-10;1!UBERON:0002471;2.07e-10;1!UBERON:0001383;2.07e-10;1!UBERON:0004910;2.07e-10;1!UBERON:0010758;2.07e-10;1!UBERON:0010707;2.07e-10;1!UBERON:0004813;2.07e-10;1!UBERON:0000978;2.07e-10;1!UBERON:0002103;2.07e-10;1!UBERON:0001665;2.07e-10;1!UBERON:0003823;2.07e-10;1!UBERON:0000154;2.07e-10;1!UBERON:0010709;2.07e-10;1 | |||
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| |||
|short_description=p7@GNE | |||
}} |
Revision as of 09:00, 14 September 2013
Short description: | p7@GNE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_GNE_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000377902, NM_001190383, NM_001190384, NM_005476_5end |
EntrezGene: | GNE |
HGNC: | 23657 |
UniProt: | Q9Y223A7UNU7B7Z372F5H499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.08e-10 | 1 |
seminiferous tubule epithelial cell | 1.08e-10 | 1 |
Sertoli cell | 1.08e-10 | 1 |
multinucleate cell | 1.43e-10 | 1 |
myotube | 1.43e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.57e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.