FFCP PHASE1:Mm9::chr6:145813407..145813411,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=31|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:145813407..145813411,-|id=chr6:145813407..145813411,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.54e-15!3;UBERON:0000478!1.54e-15!3;UBERON:0000158!1.54e-15!3;UBERON:0001987!7.44e-11!2;UBERON:0003124!7.44e-11!2;UBERON:0004340!7.44e-11!2;UBERON:0003975!1.70e-09!5;UBERON:0004175!4.46e-09!9;UBERON:0000014!7.36e-09!5;UBERON:0001003!7.36e-09!5;UBERON:0002097!7.36e-09!5;UBERON:0002199!7.36e-09!5;UBERON:0007029!7.36e-09!5;UBERON:0007376!7.36e-09!5;UBERON:0002416!7.36e-09!5;UBERON:0007383!7.36e-09!5|ontology_enrichment_uberon_v019_2=UBERON:0001987,5.75e-23,2;UBERON:0003124,5.75e-23,2;UBERON:0004340,5.75e-23,2;UBERON:0004175,1.98e-20,9;UBERON:0005631,8.02e-16,3;UBERON:0000478,8.02e-16,3;UBERON:0000158,8.02e-16,3;UBERON:0001301,1.12e-15,3;UBERON:0006555,1.12e-15,3;UBERON:0005103,1.12e-15,3;UBERON:0000083,1.12e-15,3;UBERON:0009201,1.12e-15,3;UBERON:0004819,1.12e-15,3;UBERON:0006553,1.12e-15,3;UBERON:0003074,1.12e-15,3;UBERON:0003060,1.12e-15,3;UBERON:0005795,3.12e-12,4;UBERON:0000995,3.12e-12,4;UBERON:0000080,4.02e-12,4;UBERON:0005904,4.02e-12,4;UBERON:0006947,4.02e-12,4;UBERON:0002120,4.02e-12,4;UBERON:0004054,4.02e-12,4;UBERON:0004875,4.02e-12,4;UBERON:0004876,4.02e-12,4;UBERON:0005721,4.02e-12,4;UBERON:0005754,4.02e-12,4;UBERON:0007297,4.02e-12,4;UBERON:0006554,6.81e-11,18;UBERON:0001008,2.18e-10,19;UBERON:0003975,4.56e-10,5;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26;UBERON:0000058,1.64e-07,7;UBERON:0003134,8.61e-07,8|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,9.10877904714427,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:145813407..145813411,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:145813407..145813411,- | |||
|id=chr6:145813407..145813411,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.54e-15!3;UBERON:0000478!1.54e-15!3;UBERON:0000158!1.54e-15!3;UBERON:0001987!7.44e-11!2;UBERON:0003124!7.44e-11!2;UBERON:0004340!7.44e-11!2;UBERON:0003975!1.70e-09!5;UBERON:0004175!4.46e-09!9;UBERON:0000014!7.36e-09!5;UBERON:0001003!7.36e-09!5;UBERON:0002097!7.36e-09!5;UBERON:0002199!7.36e-09!5;UBERON:0007029!7.36e-09!5;UBERON:0007376!7.36e-09!5;UBERON:0002416!7.36e-09!5;UBERON:0007383!7.36e-09!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,5.75e-23,2;UBERON:0003124,5.75e-23,2;UBERON:0004340,5.75e-23,2;UBERON:0004175,1.98e-20,9;UBERON:0005631,8.02e-16,3;UBERON:0000478,8.02e-16,3;UBERON:0000158,8.02e-16,3;UBERON:0001301,1.12e-15,3;UBERON:0006555,1.12e-15,3;UBERON:0005103,1.12e-15,3;UBERON:0000083,1.12e-15,3;UBERON:0009201,1.12e-15,3;UBERON:0004819,1.12e-15,3;UBERON:0006553,1.12e-15,3;UBERON:0003074,1.12e-15,3;UBERON:0003060,1.12e-15,3;UBERON:0005795,3.12e-12,4;UBERON:0000995,3.12e-12,4;UBERON:0000080,4.02e-12,4;UBERON:0005904,4.02e-12,4;UBERON:0006947,4.02e-12,4;UBERON:0002120,4.02e-12,4;UBERON:0004054,4.02e-12,4;UBERON:0004875,4.02e-12,4;UBERON:0004876,4.02e-12,4;UBERON:0005721,4.02e-12,4;UBERON:0005754,4.02e-12,4;UBERON:0007297,4.02e-12,4;UBERON:0006554,6.81e-11,18;UBERON:0001008,2.18e-10,19;UBERON:0003975,4.56e-10,5;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26;UBERON:0000058,1.64e-07,7;UBERON:0003134,8.61e-07,8 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0217820674694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,9.10877904714427,0,0.16488625294148,0,0.120625849856312,0,0.328281799490123,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0.100966449948148,0,0,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0.643105137237198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:145813407..145813411,- | |||
}} |
Revision as of 09:22, 14 September 2013
Short description: | p@chr6:145813407..145813411, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:145813407..145813411, - |
Coexpression cluster: | MCL_coexpression_mm9:31 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placenta | 5.75e-23 | 2 |
chorion | 5.75e-23 | 2 |
allantois | 5.75e-23 | 2 |
internal genitalia | 1.98e-20 | 9 |
extraembryonic membrane | 8.02e-16 | 3 |
extraembryonic structure | 8.02e-16 | 3 |
membranous layer | 8.02e-16 | 3 |
epididymis | 1.12e-15 | 3 |
excretory tube | 1.12e-15 | 3 |
mesonephric epithelium | 1.12e-15 | 3 |
mesonephric tubule | 1.12e-15 | 3 |
nephric duct | 1.12e-15 | 3 |
kidney epithelium | 1.12e-15 | 3 |
renal duct | 1.12e-15 | 3 |
mesonephric duct | 1.12e-15 | 3 |
pronephric duct | 1.12e-15 | 3 |
embryonic uterus | 3.12e-12 | 4 |
uterus | 3.12e-12 | 4 |
mesonephros | 4.02e-12 | 4 |
duct of male reproductive system | 4.02e-12 | 4 |
male genital duct | 4.02e-12 | 4 |
pronephros | 4.02e-12 | 4 |
internal male genitalia | 4.02e-12 | 4 |
nephrogenic cord | 4.02e-12 | 4 |
urogenital ridge | 4.02e-12 | 4 |
pronephric mesoderm | 4.02e-12 | 4 |
rostral part of nephrogenic cord | 4.02e-12 | 4 |
presumptive pronephric mesoderm | 4.02e-12 | 4 |
urinary system structure | 6.81e-11 | 18 |
renal system | 2.18e-10 | 19 |
internal female genitalia | 4.56e-10 | 5 |
reproductive organ | 1.75e-08 | 24 |
reproductive structure | 6.33e-08 | 26 |
reproductive system | 6.33e-08 | 26 |
duct | 1.64e-07 | 7 |
female reproductive organ | 8.61e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.