FFCP PHASE1:Mm9::chr6:69450809..69450835,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=192|UniProt=|association_with_transcript=-270bp_to_ENSMUST00000103355_5end|description=CAGE_peak_1_at_ENSMUST00000103355_5end|id=chr6:69450809..69450835,-|ontology_enrichment_celltype=CL:0000553!7.75e-11!6;CL:0000556!7.75e-11!6;CL:0000050!7.60e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,1.06e-20,6;CL:0000556,1.06e-20,6;CL:0000050,1.32e-13,9;CL:0002027,7.48e-11,3;CL:0002006,7.48e-11,3;CL:0002024,7.48e-11,3;CL:0000839,3.15e-09,13;CL:0000763,2.23e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.22e-10!51;UBERON:0002193!1.57e-08!48|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.24e-11,3;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0001962,3.04e-08,2;UBERON:0001961,3.04e-08,2;UBERON:0001744,3.04e-08,2;UBERON:0001155,9.86e-08,2;UBERON:0000059,9.86e-08,2;UBERON:0002371,2.23e-07,16;UBERON:0007023,2.29e-07,51;UBERON:0001474,6.99e-07,22;UBERON:0004765,6.99e-07,22;UBERON:0001434,6.99e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66286595086627,5.66930748691513,3.49780939064073,15.2999150198745,19.8815928728321,8.91218268775863,1.78590909317247,0,0,7.51964387129011,37.6231220950159,0,0,0,3.04037471130198,0.504060259519861,1.33038306393183,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,6.71130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,3.19714863213368,32.8851112231908,0.148442139064825,0,0,0,0,0,0,0,0.86759614151947,2.65383165584962,0,0.220841518460394,0,1.86391761218122,0,0,28.1002760729451,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.439100230582101,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.723245292907558,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,42.7177201994632,0,0.185194527369712,0.565105371014073,2.46049609897845,1.37266903923914,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,8.69875038321696,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.487289403698762,0.962118416403295,0.467507608726276,0,0,0,0,2.70465431645067,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p1@ENSMUST00000103355}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=192 | |||
|UniProt= | |||
|association_with_transcript=-270bp_to_ENSMUST00000103355_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103355_5end | |||
|id=chr6:69450809..69450835,- | |||
|ontology_enrichment_celltype=CL:0000553!7.75e-11!6;CL:0000556!7.75e-11!6;CL:0000050!7.60e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.06e-20,6;CL:0000556,1.06e-20,6;CL:0000050,1.32e-13,9;CL:0002027,7.48e-11,3;CL:0002006,7.48e-11,3;CL:0002024,7.48e-11,3;CL:0000839,3.15e-09,13;CL:0000763,2.23e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-10!51;UBERON:0002193!1.57e-08!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,1.24e-11,3;UBERON:0002193,1.07e-09,48;UBERON:0002405,1.07e-09,48;UBERON:0001962,3.04e-08,2;UBERON:0001961,3.04e-08,2;UBERON:0001744,3.04e-08,2;UBERON:0001155,9.86e-08,2;UBERON:0000059,9.86e-08,2;UBERON:0002371,2.23e-07,16;UBERON:0007023,2.29e-07,51;UBERON:0001474,6.99e-07,22;UBERON:0004765,6.99e-07,22;UBERON:0001434,6.99e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.66286595086627,5.66930748691513,3.49780939064073,15.2999150198745,19.8815928728321,8.91218268775863,1.78590909317247,0,0,7.51964387129011,37.6231220950159,0,0,0,3.04037471130198,0.504060259519861,1.33038306393183,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,6.71130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,3.5111105032938,0,0,0,0,0,0,0,0,0,0,3.19714863213368,32.8851112231908,0.148442139064825,0,0,0,0,0,0,0,0.86759614151947,2.65383165584962,0,0.220841518460394,0,1.86391761218122,0,0,28.1002760729451,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0.631325567659422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0.146199987425332,0.439100230582101,0,0,0,0,0.528901133327089,0,0,0,0,0,0,0.474529061544512,0.164698954724011,0,0,0,0,0,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0.252578877947112,0,0,0.554259570499814,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.723245292907558,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0.356497378384721,0,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,42.7177201994632,0,0.185194527369712,0.565105371014073,2.46049609897845,1.37266903923914,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,8.69875038321696,0,0,0,0,0,0,0,0,0,0,0,1.58005560314089,0,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.487289403698762,0.962118416403295,0.467507608726276,0,0,0,0,2.70465431645067,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p1@ENSMUST00000103355 | |||
}} |
Revision as of 10:29, 14 September 2013
Short description: | p1@ENSMUST00000103355 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103355_5end |
Coexpression cluster: | MCL_coexpression_mm9:192 |
Association with transcript: | -270bp_to_ENSMUST00000103355_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.06e-20 | 6 |
megakaryocyte | 1.06e-20 | 6 |
megakaryocyte-erythroid progenitor cell | 1.32e-13 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 7.48e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 7.48e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 7.48e-11 | 3 |
myeloid lineage restricted progenitor cell | 3.15e-09 | 13 |
myeloid cell | 2.23e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 1.24e-11 | 3 |
hemolymphoid system | 1.07e-09 | 48 |
immune system | 1.07e-09 | 48 |
gut-associated lymphoid tissue | 3.04e-08 | 2 |
mucosa-associated lymphoid tissue | 3.04e-08 | 2 |
lymphoid tissue | 3.04e-08 | 2 |
colon | 9.86e-08 | 2 |
large intestine | 9.86e-08 | 2 |
bone marrow | 2.23e-07 | 16 |
adult organism | 2.29e-07 | 51 |
bone element | 6.99e-07 | 22 |
skeletal element | 6.99e-07 | 22 |
skeletal system | 6.99e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.