FFCP PHASE1:Hg19::chrX:133119959..133119970,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2719|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4451|TSSclassifier=S|UniProt=P51654|association_with_transcript=-37bp_to_ENST00000370818_5end|coexpression_cluster_id=C55|description=CAGE_peak_8_at_GPC3_5end|id=chrX:133119959..133119970,-|ontology_enrichment_celltype=CL:0002322!4.08e-09!5|ontology_enrichment_celltype_v019=CL:0002322;2.40e-36;5!CL:0002321;4.62e-12;15!CL:0000182;1.51e-10;12!CL:0000148;3.56e-07;10|ontology_enrichment_celltype_v019_2=CL:0002322,2.08e-36,5;CL:0000182,1.39e-10,12;CL:0000148,3.80e-07,10;CL:0000541,3.80e-07,10|ontology_enrichment_development_v019=UBERON:0004161;1.98e-17;11!UBERON:0003104;8.17e-15;31!UBERON:0009497;1.00e-14;13!UBERON:0000358;3.18e-09;1!UBERON:0003124;1.37e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;1.37e-08;1!DOID:4549;1.37e-08;1!DOID:5861;1.37e-08;1!DOID:6496;1.37e-08;1|ontology_enrichment_disease_v019_2=DOID:3371,9.02e-09,1;DOID:4549,9.02e-09,1;DOID:5861,9.02e-09,1;DOID:6496,9.02e-09,1|ontology_enrichment_uberon=UBERON:0002368!6.07e-07!35|ontology_enrichment_uberon_v019=UBERON:0002107;5.18e-10;19!UBERON:0006925;5.18e-10;19!UBERON:0000922;1.44e-08;49!UBERON:0001987;3.46e-08;4!UBERON:0002423;1.49e-07;25|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.67e-10,19;UBERON:0006925,4.67e-10,19;UBERON:0008836,4.67e-10,19;UBERON:0008835,1.18e-08,22;UBERON:0003894,1.18e-08,22;UBERON:0009854,2.88e-08,23;UBERON:0001987,4.31e-08,4;UBERON:0004340,4.31e-08,4;UBERON:0007499,1.38e-07,25;UBERON:0009497,1.38e-07,25;UBERON:0000015,1.38e-07,25;UBERON:0002423,1.38e-07,25;UBERON:0006235,1.38e-07,25;UBERON:0004161,1.38e-07,25;UBERON:0009856,2.77e-07,26|phase1_expression=0.908391896352783,0,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0.286804595389004,1.46368447355514,1.98794652482228,1.16193942869518,1.86589899027667,2.01856680700503,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5119514666484,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.846016147141356,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,2.56377770705936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0.606802608747567,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.276283915531148,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17499872630438,0.1137934482855,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0.432777279484182,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,1.94163478721301,0,0,0,0,0,0,0.213452994739353,0,0,1.71804894248874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,4.41185820920452,2.80213918495966,3.63979136812598,0,0,0,0,0.964518890790115,1.51293380256957,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,1.78345599658994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0.936669811613763,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2719 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4451 | |||
|TSSclassifier=S | |||
|UniProt=P51654 | |||
|association_with_transcript=-37bp_to_ENST00000370818_5end | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_8_at_GPC3_5end | |||
|id=chrX:133119959..133119970,- | |||
|ontology_enrichment_celltype=CL:0002322!4.08e-09!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.40e-36;5!CL:0002321;4.62e-12;15!CL:0000182;1.51e-10;12!CL:0000148;3.56e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.08e-36,5;CL:0000182,1.39e-10,12;CL:0000148,3.80e-07,10;CL:0000541,3.80e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.98e-17;11!UBERON:0003104;8.17e-15;31!UBERON:0009497;1.00e-14;13!UBERON:0000358;3.18e-09;1!UBERON:0003124;1.37e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;1.37e-08;1!DOID:4549;1.37e-08;1!DOID:5861;1.37e-08;1!DOID:6496;1.37e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.02e-09,1;DOID:4549,9.02e-09,1;DOID:5861,9.02e-09,1;DOID:6496,9.02e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002368!6.07e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.18e-10;19!UBERON:0006925;5.18e-10;19!UBERON:0000922;1.44e-08;49!UBERON:0001987;3.46e-08;4!UBERON:0002423;1.49e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.67e-10,19;UBERON:0006925,4.67e-10,19;UBERON:0008836,4.67e-10,19;UBERON:0008835,1.18e-08,22;UBERON:0003894,1.18e-08,22;UBERON:0009854,2.88e-08,23;UBERON:0001987,4.31e-08,4;UBERON:0004340,4.31e-08,4;UBERON:0007499,1.38e-07,25;UBERON:0009497,1.38e-07,25;UBERON:0000015,1.38e-07,25;UBERON:0002423,1.38e-07,25;UBERON:0006235,1.38e-07,25;UBERON:0004161,1.38e-07,25;UBERON:0009856,2.77e-07,26 | |||
|phase1_expression=0.908391896352783,0,0.281908808191942,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.600952235626387,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0.286804595389004,1.46368447355514,1.98794652482228,1.16193942869518,1.86589899027667,2.01856680700503,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5119514666484,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.846016147141356,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,2.56377770705936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,0.146508179271894,0.606802608747567,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.276283915531148,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17499872630438,0.1137934482855,0,0,0.344743373241465,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0.432777279484182,0,0.0884575645033392,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,1.94163478721301,0,0,0,0,0,0,0.213452994739353,0,0,1.71804894248874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,4.41185820920452,2.80213918495966,3.63979136812598,0,0,0,0,0.964518890790115,1.51293380256957,0.415440338029185,0,0,0.0607495566580247,0,0.157611414598396,1.78345599658994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65013777824443,0.129282956361551,0.13223260174269,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0.936669811613763,0.144921028610825,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300515217994437,0.380805212168795,0,0,0.322231671127465,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.336283722218824,0.606965604236632,0.227662191351298,1.06442844195167,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,2.78173235684127,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,2.3196288626764,0.971421986118279,0,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,2.20880187070458,0,0,1.0580536810308,0,0,0,0.126166424835079,2.4038425832013,1.26698501011437,0.305966489225945,1.06886962106224,0.275684698604535,0.752122617877125,0.454672189309436,0.267964130156178,0,0,0,0.714193294391221,0.0645889098360061,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0,0.684466602170562,0,0.0717222053926763,0.665320713092027,0,0.106727345877715,0,0,4.69281884806909,0.122241444182866,0,0,0,0 | |||
|short_description=p8@GPC3 | |||
}} |
Revision as of 10:47, 14 September 2013
Short description: | p8@GPC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_GPC3_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -37bp_to_ENST00000370818_5end |
EntrezGene: | GPC3 |
HGNC: | 4451 |
UniProt: | P51654 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.08e-36 | 5 |
hepatocyte | 1.39e-10 | 12 |
melanocyte | 3.80e-07 | 10 |
melanoblast | 3.80e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
liver | 4.67e-10 | 19 |
digestive gland | 4.67e-10 | 19 |
liver bud | 4.67e-10 | 19 |
hepatic diverticulum | 1.18e-08 | 22 |
liver primordium | 1.18e-08 | 22 |
digestive tract diverticulum | 2.88e-08 | 23 |
placenta | 4.31e-08 | 4 |
allantois | 4.31e-08 | 4 |
epithelial sac | 1.38e-07 | 25 |
epithelium of foregut-midgut junction | 1.38e-07 | 25 |
anatomical boundary | 1.38e-07 | 25 |
hepatobiliary system | 1.38e-07 | 25 |
foregut-midgut junction | 1.38e-07 | 25 |
septum transversum | 1.38e-07 | 25 |
sac | 2.77e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.02e-09 | 1 |
extraosseous chondrosarcoma | 9.02e-09 | 1 |
myxoid chondrosarcoma | 9.02e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 9.02e-09 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.