FFCP PHASE1:Hg19::chrX:73285597..73285614,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-303bp_to_ENST00000366220_5end|coexpression_cluster_id=C2116|description=CAGE_peak_1_at_ENST00000366220_5end|id=chrX:73285597..73285614,+|ontology_enrichment_celltype=CL:0002057!7.94e-24!42;CL:0000860!3.89e-22!45;CL:0000839!1.53e-18!70;CL:0000557!8.16e-18!71;CL:0000766!2.18e-17!76;CL:0002009!7.81e-17!65;CL:0000738!3.72e-16!140;CL:0002194!5.24e-16!63;CL:0000576!5.24e-16!63;CL:0000040!5.24e-16!63;CL:0000559!5.24e-16!63;CL:0002031!6.57e-16!124;CL:0000763!2.66e-14!112;CL:0000049!2.66e-14!112;CL:0000037!7.85e-14!172;CL:0000566!7.85e-14!172;CL:0002032!2.69e-13!165;CL:0000837!2.69e-13!165;CL:0002087!1.91e-12!119;CL:0000988!1.17e-11!182|ontology_enrichment_celltype_v019=CL:0000860;8.15e-23;33!CL:0002057;8.15e-23;33!CL:0000473;2.87e-20;39!CL:0000234;2.87e-20;39!CL:0000576;8.75e-16;48!CL:0000766;1.26e-12;69!CL:0000197;9.15e-10;6!CL:0000098;9.15e-10;6!CL:0002167;9.15e-10;6|ontology_enrichment_celltype_v019_2=CL:0000473,3.58e-31,48;CL:0000234,3.58e-31,48;CL:0000860,7.35e-30,42;CL:0002057,7.35e-30,42;CL:0000839,7.18e-27,66;CL:0000766,1.25e-23,72;CL:0000557,1.64e-23,67;CL:0002194,1.42e-22,59;CL:0000576,1.42e-22,59;CL:0000040,1.42e-22,59;CL:0000559,1.42e-22,59;CL:0002009,1.78e-21,61;CL:0000763,7.01e-16,108;CL:0000049,7.01e-16,108;CL:0002031,2.74e-15,120;CL:0000738,1.18e-12,136;CL:0002087,8.05e-12,115;CL:0002032,4.91e-11,161;CL:0000837,4.91e-11,161;CL:0000037,1.36e-10,168;CL:0000197,8.74e-10,6;CL:0000098,8.74e-10,6;CL:0002167,8.74e-10,6;CL:0000988,2.30e-09,177|ontology_enrichment_development_v019=CL:0002057;5.91e-22;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.05e-15!80;UBERON:0001474!1.68e-14!86;UBERON:0004765!9.86e-14!101;UBERON:0001434!9.86e-14!101;UBERON:0002390!2.60e-10!102;UBERON:0003061!2.60e-10!102;UBERON:0002193!2.83e-09!112;UBERON:0002405!5.77e-09!115;UBERON:0002204!1.91e-08!167;UBERON:0001737!1.86e-07!9|ontology_enrichment_uberon_v019=UBERON:0001737;2.94e-11;9!UBERON:0001557;2.94e-11;9|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.55e-21,76;UBERON:0001474,2.19e-18,82;UBERON:0004765,4.46e-18,90;UBERON:0002405,5.31e-18,93;UBERON:0001434,4.95e-15,100;UBERON:0002390,2.60e-14,98;UBERON:0003061,2.60e-14,98;UBERON:0002193,9.11e-14,108;UBERON:0001737,4.13e-11,9;UBERON:0002204,9.47e-10,167|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.05092631806598,5.42425075221579,7.30310090387373,4.39139518911456,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.164201178899891,0,0.786728553697808,0.383829398097213,2.78669021968937,0,0.30120591877825,0.369754010166788,0,0,0.587200878669695,0.553995408531877,0,0,0,0,0,2.4717700592526,2.26725566213286,0.970336244751265,2.32429036905685,1.6446715520873,1.54853185447552,1.7261543539329,3.33008918487831,4.96612682766029,0.689491361473237,1.29096936716765,1.35426486594342,1.31769637679823,1.63743690034707,2.02251136000576,1.83650335422542,2.88836124368484,1.27867425159808,6.59702600373432,4.3882004676759,4.26224750532694,1.45104619314292,0,0.622822248995575,6.28121663141858,2.60741459210101,4.12658804939722,1.21079900526674,0.368277635987565,1.89877432464531,3.16882929467913,5.31510749912609,3.35453832813401,1.57260083605093,2.85336096398862,3.69668849403284,2.56511469367124,6.96208370196815,6.02791707423292,0,1.63841583378639,2.66852776159066,0.853460445133014,0.800791974072025,0.574752439954483,0,0.954053754535364,0,0,0,0,0,1.84368859342554,0,0,0,4.68122187093899,1.30368906653436,1.4203434172042,3.89653456815823,4.67923918917729,3.24066498222321,5.31681347000691,4.60366568400527,4.86747014957566,4.55207716459574,4.1109476150919,2.76350017785848,4.05724320029073,4.15202376853769,5.08327573370455,2.09071047609954,4.19244567980995,1.53288197440768,2.06176467289578,6.57851199250707,0.95569624297229,0,0,1.35517607169996,1.4078527226986,1.24930726552346,0.947109008176067,0.821127996921047,0,0.267440195783507,0,0,0,3.58015173161885,0,0,0,0,0,0,0,0.175669571386252,0.0654895377488563,0,0,0,0,0,0,1.71598473234038,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,1.31780417436063,0,0.436094052142534,0,0,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,1.18143432568886,0,0,0,6.14255015911485,0,0,0,0,0,0,0,0,0,0,2.27088765788066,1.45990943630332,0,0,0,0,0.721879481669586,1.53798840051797,1.68584690078102,2.41011029883482,2.09558548191549,3.05031221729369,2.37270619111097,2.15730093056263,3.13954344200554,3.8474715694639,0,0,0,0,0,0,0,0,0.122988438543114,6.00487336044839,0,0,0.100528972411631,0.0925884451585296,0,0,0,2.08674728955138,3.40485213283883,0,4.62985512576611,3.99533719692656,0,0,0,0,0,0.93733833986777,3.69560682037491,8.50650583454319,0,0,0,0,3.16974362447614,1.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-303bp_to_ENST00000366220_5end | |||
|coexpression_cluster_id=C2116 | |||
|description=CAGE_peak_1_at_ENST00000366220_5end | |||
|id=chrX:73285597..73285614,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.94e-24!42;CL:0000860!3.89e-22!45;CL:0000839!1.53e-18!70;CL:0000557!8.16e-18!71;CL:0000766!2.18e-17!76;CL:0002009!7.81e-17!65;CL:0000738!3.72e-16!140;CL:0002194!5.24e-16!63;CL:0000576!5.24e-16!63;CL:0000040!5.24e-16!63;CL:0000559!5.24e-16!63;CL:0002031!6.57e-16!124;CL:0000763!2.66e-14!112;CL:0000049!2.66e-14!112;CL:0000037!7.85e-14!172;CL:0000566!7.85e-14!172;CL:0002032!2.69e-13!165;CL:0000837!2.69e-13!165;CL:0002087!1.91e-12!119;CL:0000988!1.17e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.15e-23;33!CL:0002057;8.15e-23;33!CL:0000473;2.87e-20;39!CL:0000234;2.87e-20;39!CL:0000576;8.75e-16;48!CL:0000766;1.26e-12;69!CL:0000197;9.15e-10;6!CL:0000098;9.15e-10;6!CL:0002167;9.15e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.58e-31,48;CL:0000234,3.58e-31,48;CL:0000860,7.35e-30,42;CL:0002057,7.35e-30,42;CL:0000839,7.18e-27,66;CL:0000766,1.25e-23,72;CL:0000557,1.64e-23,67;CL:0002194,1.42e-22,59;CL:0000576,1.42e-22,59;CL:0000040,1.42e-22,59;CL:0000559,1.42e-22,59;CL:0002009,1.78e-21,61;CL:0000763,7.01e-16,108;CL:0000049,7.01e-16,108;CL:0002031,2.74e-15,120;CL:0000738,1.18e-12,136;CL:0002087,8.05e-12,115;CL:0002032,4.91e-11,161;CL:0000837,4.91e-11,161;CL:0000037,1.36e-10,168;CL:0000197,8.74e-10,6;CL:0000098,8.74e-10,6;CL:0002167,8.74e-10,6;CL:0000988,2.30e-09,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.91e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.05e-15!80;UBERON:0001474!1.68e-14!86;UBERON:0004765!9.86e-14!101;UBERON:0001434!9.86e-14!101;UBERON:0002390!2.60e-10!102;UBERON:0003061!2.60e-10!102;UBERON:0002193!2.83e-09!112;UBERON:0002405!5.77e-09!115;UBERON:0002204!1.91e-08!167;UBERON:0001737!1.86e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.94e-11;9!UBERON:0001557;2.94e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.55e-21,76;UBERON:0001474,2.19e-18,82;UBERON:0004765,4.46e-18,90;UBERON:0002405,5.31e-18,93;UBERON:0001434,4.95e-15,100;UBERON:0002390,2.60e-14,98;UBERON:0003061,2.60e-14,98;UBERON:0002193,9.11e-14,108;UBERON:0001737,4.13e-11,9;UBERON:0002204,9.47e-10,167 | |||
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| |||
|short_description=p1@ENST00000366220 | |||
}} |
Revision as of 12:31, 14 September 2013
Short description: | p1@ENST00000366220 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000366220_5end |
Coexpression cluster: | C2116_Aortic_Mallassezderived_mesenchymal_Lymphatic_Melanocyte_CD14CD16_CD14 |
Association with transcript: | -303bp_to_ENST00000366220_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.58e-31 | 48 |
phagocyte | 3.58e-31 | 48 |
classical monocyte | 7.35e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.35e-30 | 42 |
myeloid lineage restricted progenitor cell | 7.18e-27 | 66 |
myeloid leukocyte | 1.25e-23 | 72 |
granulocyte monocyte progenitor cell | 1.64e-23 | 67 |
monopoietic cell | 1.42e-22 | 59 |
monocyte | 1.42e-22 | 59 |
monoblast | 1.42e-22 | 59 |
promonocyte | 1.42e-22 | 59 |
macrophage dendritic cell progenitor | 1.78e-21 | 61 |
myeloid cell | 7.01e-16 | 108 |
common myeloid progenitor | 7.01e-16 | 108 |
hematopoietic lineage restricted progenitor cell | 2.74e-15 | 120 |
leukocyte | 1.18e-12 | 136 |
nongranular leukocyte | 8.05e-12 | 115 |
hematopoietic oligopotent progenitor cell | 4.91e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.91e-11 | 161 |
hematopoietic stem cell | 1.36e-10 | 168 |
receptor cell | 8.74e-10 | 6 |
sensory epithelial cell | 8.74e-10 | 6 |
olfactory epithelial cell | 8.74e-10 | 6 |
hematopoietic cell | 2.30e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.55e-21 | 76 |
bone element | 2.19e-18 | 82 |
skeletal element | 4.46e-18 | 90 |
immune system | 5.31e-18 | 93 |
skeletal system | 4.95e-15 | 100 |
hematopoietic system | 2.60e-14 | 98 |
blood island | 2.60e-14 | 98 |
hemolymphoid system | 9.11e-14 | 108 |
larynx | 4.13e-11 | 9 |
musculoskeletal system | 9.47e-10 | 167 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.