FFCP PHASE1:Mm9::chr8:113046284..113046287,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:113046284..113046287,+|id=chr8:113046284..113046287,+|ontology_enrichment_celltype=CL:0000393!3.56e-55!39;CL:0000211!3.56e-55!39;CL:0000540!5.08e-53!33;CL:0000047!5.08e-53!33;CL:0000031!5.08e-53!33;CL:0000404!5.08e-53!33;CL:0000055!3.52e-48!50;CL:0002319!4.50e-46!43;CL:0000221!6.71e-45!44;CL:0000133!6.71e-45!44;CL:0000117!2.63e-35!23;CL:0000337!2.63e-35!23;CL:0002321!2.97e-35!70;CL:0000220!2.97e-35!70;CL:0000723!6.69e-24!91;CL:0000048!6.69e-24!91;CL:0000034!4.67e-22!97;CL:0000548!1.19e-20!115;CL:0000004!1.19e-20!115;CL:0000255!1.19e-20!115;CL:0002371!5.65e-20!118;CL:0000107!6.76e-20!9;CL:0000144!2.49e-19!121;CL:0000012!2.49e-19!121;CL:0002609!1.03e-11!6;CL:0002612!8.64e-10!3;CL:0002494!3.09e-08!3;CL:0000737!3.09e-08!3;CL:0000746!3.09e-08!3;CL:0000513!3.09e-08!3;CL:0002613!3.48e-08!3|ontology_enrichment_celltype_v019_2=CL:0000540,1.23e-23,33;CL:0000047,1.23e-23,33;CL:0000031,1.23e-23,33;CL:0000404,1.23e-23,33;CL:0000393,5.55e-20,39;CL:0000211,5.55e-20,39;CL:0002319,4.15e-18,43;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0000107,1.27e-17,9;CL:0002612,2.70e-14,3;CL:0002321,4.95e-11,70;CL:0000117,8.25e-11,23;CL:0000337,8.25e-11,23;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.98e-24!11;UBERON:0000073!5.15e-24!75;UBERON:0001016!5.15e-24!75;UBERON:0001017!5.39e-21!73;UBERON:0005743!5.39e-21!73;UBERON:0002410!6.76e-20!9;UBERON:0004121!3.85e-16!102;UBERON:0000924!3.85e-16!102;UBERON:0006601!3.85e-16!102;UBERON:0002020!3.21e-13!34;UBERON:0002257!8.64e-10!3;UBERON:0000013!1.12e-09!3;UBERON:0002005!1.12e-09!3;UBERON:0005428!1.12e-09!3;UBERON:0001948!1.84e-09!5;UBERON:0002315!1.84e-09!5;UBERON:0002420!2.80e-08!8;UBERON:0007245!2.80e-08!8;UBERON:0010009!2.80e-08!8;UBERON:0010011!2.80e-08!8;UBERON:0000454!2.80e-08!8;UBERON:0002240!6.95e-08!6;UBERON:0005174!6.95e-08!6;UBERON:0001137!6.95e-08!6;UBERON:0002346!7.29e-08!71;UBERON:0003075!7.29e-08!71;UBERON:0007284!7.29e-08!71;UBERON:0002791!9.91e-08!29;UBERON:0003528!9.91e-08!29;UBERON:0001893!9.91e-08!29;UBERON:0001049!1.28e-07!52;UBERON:0005068!1.28e-07!52;UBERON:0006241!1.28e-07!52;UBERON:0007135!1.28e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.27e-17,9;UBERON:0000010,1.68e-14,11;UBERON:0002257,2.70e-14,3;UBERON:0000013,1.04e-13,3;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0001948,5.88e-09,5;UBERON:0002315,5.88e-09,5;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0002240,1.30e-07,6;UBERON:0005174,1.30e-07,6;UBERON:0001137,1.30e-07,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,1.45165457231869,0.540023753326763,0.630974884054146,0,0.220868540951614,0.61245399607477,0.479227355091182,0,0,1.27687338085188,0.46081959976873,0.131886287730194,0.457438218012048,0.52091337055676,0.558365998002762,0,1.5279824777681,0.589257170947335,1.85083185038834,1.67759501242771,0.530083353332288,0.226714680320357,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0.780877488593277,1.93881057959519,0.238968797952552,1.33679204449436,0,1.21443210502468,1.46127928955656,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:113046284..113046287,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:113046284..113046287,+ | |||
|id=chr8:113046284..113046287,+ | |||
|ontology_enrichment_celltype=CL:0000393!3.56e-55!39;CL:0000211!3.56e-55!39;CL:0000540!5.08e-53!33;CL:0000047!5.08e-53!33;CL:0000031!5.08e-53!33;CL:0000404!5.08e-53!33;CL:0000055!3.52e-48!50;CL:0002319!4.50e-46!43;CL:0000221!6.71e-45!44;CL:0000133!6.71e-45!44;CL:0000117!2.63e-35!23;CL:0000337!2.63e-35!23;CL:0002321!2.97e-35!70;CL:0000220!2.97e-35!70;CL:0000723!6.69e-24!91;CL:0000048!6.69e-24!91;CL:0000034!4.67e-22!97;CL:0000548!1.19e-20!115;CL:0000004!1.19e-20!115;CL:0000255!1.19e-20!115;CL:0002371!5.65e-20!118;CL:0000107!6.76e-20!9;CL:0000144!2.49e-19!121;CL:0000012!2.49e-19!121;CL:0002609!1.03e-11!6;CL:0002612!8.64e-10!3;CL:0002494!3.09e-08!3;CL:0000737!3.09e-08!3;CL:0000746!3.09e-08!3;CL:0000513!3.09e-08!3;CL:0002613!3.48e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.23e-23,33;CL:0000047,1.23e-23,33;CL:0000031,1.23e-23,33;CL:0000404,1.23e-23,33;CL:0000393,5.55e-20,39;CL:0000211,5.55e-20,39;CL:0002319,4.15e-18,43;CL:0000221,1.08e-17,44;CL:0000133,1.08e-17,44;CL:0000107,1.27e-17,9;CL:0002612,2.70e-14,3;CL:0002321,4.95e-11,70;CL:0000117,8.25e-11,23;CL:0000337,8.25e-11,23;CL:0000723,2.09e-08,91;CL:0000048,2.09e-08,91;CL:0000034,7.32e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.98e-24!11;UBERON:0000073!5.15e-24!75;UBERON:0001016!5.15e-24!75;UBERON:0001017!5.39e-21!73;UBERON:0005743!5.39e-21!73;UBERON:0002410!6.76e-20!9;UBERON:0004121!3.85e-16!102;UBERON:0000924!3.85e-16!102;UBERON:0006601!3.85e-16!102;UBERON:0002020!3.21e-13!34;UBERON:0002257!8.64e-10!3;UBERON:0000013!1.12e-09!3;UBERON:0002005!1.12e-09!3;UBERON:0005428!1.12e-09!3;UBERON:0001948!1.84e-09!5;UBERON:0002315!1.84e-09!5;UBERON:0002420!2.80e-08!8;UBERON:0007245!2.80e-08!8;UBERON:0010009!2.80e-08!8;UBERON:0010011!2.80e-08!8;UBERON:0000454!2.80e-08!8;UBERON:0002240!6.95e-08!6;UBERON:0005174!6.95e-08!6;UBERON:0001137!6.95e-08!6;UBERON:0002346!7.29e-08!71;UBERON:0003075!7.29e-08!71;UBERON:0007284!7.29e-08!71;UBERON:0002791!9.91e-08!29;UBERON:0003528!9.91e-08!29;UBERON:0001893!9.91e-08!29;UBERON:0001049!1.28e-07!52;UBERON:0005068!1.28e-07!52;UBERON:0006241!1.28e-07!52;UBERON:0007135!1.28e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.27e-17,9;UBERON:0000010,1.68e-14,11;UBERON:0002257,2.70e-14,3;UBERON:0000013,1.04e-13,3;UBERON:0001017,1.45e-10,73;UBERON:0001016,2.82e-10,75;UBERON:0001948,5.88e-09,5;UBERON:0002315,5.88e-09,5;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0002240,1.30e-07,6;UBERON:0005174,1.30e-07,6;UBERON:0001137,1.30e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,0,0,0,0.449949858640699,0,0,0,0,1.45165457231869,0.540023753326763,0.630974884054146,0,0.220868540951614,0.61245399607477,0.479227355091182,0,0,1.27687338085188,0.46081959976873,0.131886287730194,0.457438218012048,0.52091337055676,0.558365998002762,0,1.5279824777681,0.589257170947335,1.85083185038834,1.67759501242771,0.530083353332288,0.226714680320357,0,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631016438832513,0.780877488593277,1.93881057959519,0.238968797952552,1.33679204449436,0,1.21443210502468,1.46127928955656,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:113046284..113046287,+ | |||
}} |
Revision as of 14:44, 14 September 2013
Short description: | p@chr8:113046284..113046287, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:113046284..113046287, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.23e-23 | 33 |
neuronal stem cell | 1.23e-23 | 33 |
neuroblast | 1.23e-23 | 33 |
electrically signaling cell | 1.23e-23 | 33 |
electrically responsive cell | 5.55e-20 | 39 |
electrically active cell | 5.55e-20 | 39 |
neural cell | 4.15e-18 | 43 |
ectodermal cell | 1.08e-17 | 44 |
neurectodermal cell | 1.08e-17 | 44 |
autonomic neuron | 1.27e-17 | 9 |
neuron of the ventral spinal cord | 2.70e-14 | 3 |
embryonic cell | 4.95e-11 | 70 |
CNS neuron (sensu Vertebrata) | 8.25e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.25e-11 | 23 |
somatic stem cell | 2.09e-08 | 91 |
multi fate stem cell | 2.09e-08 | 91 |
stem cell | 7.32e-08 | 97 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.27e-17 | 9 |
peripheral nervous system | 1.68e-14 | 11 |
ventral horn of spinal cord | 2.70e-14 | 3 |
sympathetic nervous system | 1.04e-13 | 3 |
central nervous system | 1.45e-10 | 73 |
nervous system | 2.82e-10 | 75 |
regional part of spinal cord | 5.88e-09 | 5 |
gray matter of spinal cord | 5.88e-09 | 5 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
spinal cord | 1.30e-07 | 6 |
dorsal region element | 1.30e-07 | 6 |
dorsum | 1.30e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.