FFCP PHASE1:Mm9::chr9:112002495..112002510,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=113|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:112002495..112002510,-|id=chr9:112002495..112002510,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!2.11e-17!23;UBERON:0000974!2.11e-17!23;UBERON:0004807!2.11e-17!23;UBERON:0005058!2.11e-17!23;UBERON:0003351!2.11e-17!23;UBERON:0009113!2.11e-17!23;UBERON:0003295!2.11e-17!23;UBERON:0009722!2.11e-17!23;UBERON:0005562!2.11e-17!23;UBERON:0007690!2.11e-17!23;UBERON:0006562!1.48e-16!24;UBERON:0003408!1.48e-16!24;UBERON:0001557!1.48e-16!24;UBERON:0001042!1.48e-16!24;UBERON:0008814!1.48e-16!24;UBERON:0009145!1.48e-16!24;UBERON:0000072!2.15e-14!27;UBERON:0007811!2.74e-14!86;UBERON:0000153!7.54e-14!94;UBERON:0004177!3.35e-13!29;UBERON:0000063!3.42e-12!35;UBERON:0000064!9.96e-12!99;UBERON:0002021!1.21e-09!10;UBERON:0000411!1.21e-09!10;UBERON:0001950!1.21e-09!10;UBERON:0000065!1.65e-08!41;UBERON:0001004!3.05e-08!42;UBERON:0002390!1.65e-07!45;UBERON:0003061!1.65e-07!45;UBERON:0002619!4.39e-07!17;UBERON:0002193!7.17e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.25e-11,23;UBERON:0000974,8.25e-11,23;UBERON:0004807,8.25e-11,23;UBERON:0005058,8.25e-11,23;UBERON:0003351,8.25e-11,23;UBERON:0009113,8.25e-11,23;UBERON:0003295,8.25e-11,23;UBERON:0009722,8.25e-11,23;UBERON:0005562,8.25e-11,23;UBERON:0007690,8.25e-11,23;UBERON:0006562,2.30e-10,24;UBERON:0003408,2.30e-10,24;UBERON:0001557,2.30e-10,24;UBERON:0001042,2.30e-10,24;UBERON:0008814,2.30e-10,24;UBERON:0009145,2.30e-10,24;UBERON:0002021,1.85e-09,10;UBERON:0000411,1.85e-09,10;UBERON:0001950,1.85e-09,10;UBERON:0000072,3.15e-09,27;UBERON:0004177,1.34e-08,29;UBERON:0005057,1.34e-08,29;UBERON:0000077,3.89e-07,35;UBERON:0007811,6.11e-07,36|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.616265742988964,0.909445760844565,0.179026695667481,0.198681354781265,0.841368146639782,1.03382669022204,0.807731599585181,0.15241361331,2.11734988787365,1.16949456887703,1.15454209968395,1.40252282617883,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.14579102687879,0.515559547031063,1.37016503954128,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.952587382566147,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:112002495..112002510,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=113 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:112002495..112002510,- | |||
|id=chr9:112002495..112002510,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.11e-17!23;UBERON:0000974!2.11e-17!23;UBERON:0004807!2.11e-17!23;UBERON:0005058!2.11e-17!23;UBERON:0003351!2.11e-17!23;UBERON:0009113!2.11e-17!23;UBERON:0003295!2.11e-17!23;UBERON:0009722!2.11e-17!23;UBERON:0005562!2.11e-17!23;UBERON:0007690!2.11e-17!23;UBERON:0006562!1.48e-16!24;UBERON:0003408!1.48e-16!24;UBERON:0001557!1.48e-16!24;UBERON:0001042!1.48e-16!24;UBERON:0008814!1.48e-16!24;UBERON:0009145!1.48e-16!24;UBERON:0000072!2.15e-14!27;UBERON:0007811!2.74e-14!86;UBERON:0000153!7.54e-14!94;UBERON:0004177!3.35e-13!29;UBERON:0000063!3.42e-12!35;UBERON:0000064!9.96e-12!99;UBERON:0002021!1.21e-09!10;UBERON:0000411!1.21e-09!10;UBERON:0001950!1.21e-09!10;UBERON:0000065!1.65e-08!41;UBERON:0001004!3.05e-08!42;UBERON:0002390!1.65e-07!45;UBERON:0003061!1.65e-07!45;UBERON:0002619!4.39e-07!17;UBERON:0002193!7.17e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.25e-11,23;UBERON:0000974,8.25e-11,23;UBERON:0004807,8.25e-11,23;UBERON:0005058,8.25e-11,23;UBERON:0003351,8.25e-11,23;UBERON:0009113,8.25e-11,23;UBERON:0003295,8.25e-11,23;UBERON:0009722,8.25e-11,23;UBERON:0005562,8.25e-11,23;UBERON:0007690,8.25e-11,23;UBERON:0006562,2.30e-10,24;UBERON:0003408,2.30e-10,24;UBERON:0001557,2.30e-10,24;UBERON:0001042,2.30e-10,24;UBERON:0008814,2.30e-10,24;UBERON:0009145,2.30e-10,24;UBERON:0002021,1.85e-09,10;UBERON:0000411,1.85e-09,10;UBERON:0001950,1.85e-09,10;UBERON:0000072,3.15e-09,27;UBERON:0004177,1.34e-08,29;UBERON:0005057,1.34e-08,29;UBERON:0000077,3.89e-07,35;UBERON:0007811,6.11e-07,36 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12552522006336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.616265742988964,0.909445760844565,0.179026695667481,0.198681354781265,0.841368146639782,1.03382669022204,0.807731599585181,0.15241361331,2.11734988787365,1.16949456887703,1.15454209968395,1.40252282617883,0,0,0,0,0,0,0,0,0,0,1.38097570952153,1.14579102687879,0.515559547031063,1.37016503954128,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0.952587382566147,0,0,0,0,0,0,0,0,0,0.169229215783353,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:112002495..112002510,- | |||
}} |
Revision as of 17:00, 14 September 2013
Short description: | p@chr9:112002495..112002510, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:112002495..112002510, - |
Coexpression cluster: | MCL_coexpression_mm9:113 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.25e-11 | 23 |
neck | 8.25e-11 | 23 |
respiratory system epithelium | 8.25e-11 | 23 |
hemolymphoid system gland | 8.25e-11 | 23 |
pharyngeal epithelium | 8.25e-11 | 23 |
thymic region | 8.25e-11 | 23 |
pharyngeal gland | 8.25e-11 | 23 |
entire pharyngeal arch endoderm | 8.25e-11 | 23 |
thymus primordium | 8.25e-11 | 23 |
early pharyngeal endoderm | 8.25e-11 | 23 |
pharynx | 2.30e-10 | 24 |
gland of gut | 2.30e-10 | 24 |
upper respiratory tract | 2.30e-10 | 24 |
chordate pharynx | 2.30e-10 | 24 |
pharyngeal arch system | 2.30e-10 | 24 |
pharyngeal region of foregut | 2.30e-10 | 24 |
occipital lobe | 1.85e-09 | 10 |
visual cortex | 1.85e-09 | 10 |
neocortex | 1.85e-09 | 10 |
segment of respiratory tract | 3.15e-09 | 27 |
hemopoietic organ | 1.34e-08 | 29 |
immune organ | 1.34e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 3.89e-07 | 35 |
craniocervical region | 6.11e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.