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FFCP PHASE1:Mm9::chr9:44817891..44817909,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12501|HGNC=|MCL_coexpression_id=33|UniProt=P22646,A6H6M1|association_with_transcript=-218bp_to_ENSMUST00000102832,NM_007648,uc009pez.1_5end|description=CAGE_peak_2_at_Cd3e_5end|id=chr9:44817891..44817909,-|ontology_enrichment_celltype=CL:0000791!5.54e-15!9;CL:0000789!5.54e-15!9;CL:0002420!5.54e-15!9;CL:0002419!5.54e-15!9;CL:0000790!5.54e-15!9;CL:0000624!2.62e-13!8;CL:0000838!4.99e-13!12;CL:0000084!6.90e-12!11;CL:0000827!6.90e-12!11;CL:0000542!7.58e-12!13;CL:0000051!7.58e-12!13;CL:0000893!4.29e-10!6;CL:0002489!4.29e-10!6;CL:0000898!4.29e-10!6;CL:0000809!4.29e-10!6;CL:0000810!4.29e-10!6;CL:0000895!4.29e-10!6;CL:0000808!4.29e-10!6;CL:0000894!4.29e-10!6;CL:0000806!4.29e-10!6;CL:0000807!4.29e-10!6;CL:0000805!4.29e-10!6;CL:0002425!4.29e-10!6;CL:0002436!4.29e-10!6;CL:0002427!4.29e-10!6;CL:0002428!4.29e-10!6;CL:0002429!4.29e-10!6;CL:0002433!4.29e-10!6;CL:0002431!4.29e-10!6;CL:0002432!4.29e-10!6;CL:0000738!1.60e-08!17;CL:0002087!1.60e-08!17;CL:0002031!1.45e-07!25|ontology_enrichment_celltype_v019_2=CL:0000791,2.85e-16,9;CL:0000789,2.85e-16,9;CL:0002420,2.85e-16,9;CL:0002419,2.85e-16,9;CL:0000790,2.85e-16,9;CL:0000084,3.09e-13,11;CL:0000827,3.09e-13,11;CL:0000624,7.07e-13,8;CL:0000838,4.27e-12,12;CL:0000542,3.95e-11,13;CL:0000051,3.95e-11,13;CL:0000738,2.12e-08,17;CL:0002087,2.12e-08,17;CL:0000893,8.59e-07,6;CL:0002489,8.59e-07,6;CL:0000898,8.59e-07,6;CL:0000809,8.59e-07,6;CL:0000810,8.59e-07,6;CL:0000895,8.59e-07,6;CL:0000808,8.59e-07,6;CL:0000894,8.59e-07,6;CL:0000806,8.59e-07,6;CL:0000807,8.59e-07,6;CL:0000805,8.59e-07,6;CL:0002425,8.59e-07,6;CL:0002436,8.59e-07,6;CL:0002427,8.59e-07,6;CL:0002428,8.59e-07,6;CL:0002429,8.59e-07,6;CL:0002433,8.59e-07,6;CL:0002431,8.59e-07,6;CL:0002432,8.59e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.36e-29!29;UBERON:0002370!6.58e-29!23;UBERON:0000974!6.58e-29!23;UBERON:0004807!6.58e-29!23;UBERON:0005058!6.58e-29!23;UBERON:0003351!6.58e-29!23;UBERON:0009113!6.58e-29!23;UBERON:0003295!6.58e-29!23;UBERON:0009722!6.58e-29!23;UBERON:0005562!6.58e-29!23;UBERON:0007690!6.58e-29!23;UBERON:0006562!1.88e-27!24;UBERON:0003408!1.88e-27!24;UBERON:0001557!1.88e-27!24;UBERON:0001042!1.88e-27!24;UBERON:0008814!1.88e-27!24;UBERON:0009145!1.88e-27!24;UBERON:0000065!8.03e-26!41;UBERON:0001004!5.06e-25!42;UBERON:0000072!9.79e-24!27;UBERON:0002193!4.95e-20!48;UBERON:0002390!8.72e-20!45;UBERON:0003061!8.72e-20!45;UBERON:0000063!8.53e-19!35;UBERON:0005057!1.16e-13!51;UBERON:0005911!2.73e-12!69;UBERON:0002405!1.92e-11!70;UBERON:0003081!4.63e-11!88;UBERON:0001041!5.30e-10!92;UBERON:0000077!6.37e-10!97;UBERON:0002368!2.02e-09!60;UBERON:0003929!8.95e-09!55;UBERON:0001048!1.25e-08!147;UBERON:0002530!2.96e-08!65;UBERON:0004921!6.58e-08!126;UBERON:0004185!6.58e-08!126;UBERON:0000926!1.05e-07!193;UBERON:0004120!1.05e-07!193;UBERON:0006603!1.05e-07!193;UBERON:0001007!1.18e-07!128;UBERON:0001555!1.18e-07!128;UBERON:0007026!1.18e-07!128;UBERON:0004119!2.08e-07!130;UBERON:0000925!2.08e-07!130;UBERON:0006595!2.08e-07!130;UBERON:0000064!2.40e-07!99;UBERON:0003104!4.39e-07!131;UBERON:0009142!4.39e-07!131;UBERON:0000949!6.55e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.16e-51,23;UBERON:0000974,7.16e-51,23;UBERON:0004807,7.16e-51,23;UBERON:0005058,7.16e-51,23;UBERON:0003351,7.16e-51,23;UBERON:0009113,7.16e-51,23;UBERON:0003295,7.16e-51,23;UBERON:0009722,7.16e-51,23;UBERON:0005562,7.16e-51,23;UBERON:0007690,7.16e-51,23;UBERON:0006562,1.20e-48,24;UBERON:0003408,1.20e-48,24;UBERON:0001557,1.20e-48,24;UBERON:0001042,1.20e-48,24;UBERON:0008814,1.20e-48,24;UBERON:0009145,1.20e-48,24;UBERON:0000072,5.89e-43,27;UBERON:0004177,8.15e-40,29;UBERON:0005057,8.15e-40,29;UBERON:0000077,1.53e-32,35;UBERON:0007811,1.45e-31,36;UBERON:0000065,2.17e-27,41;UBERON:0001004,1.13e-26,42;UBERON:0002193,3.67e-26,48;UBERON:0002405,3.67e-26,48;UBERON:0000153,5.43e-26,43;UBERON:0002390,1.02e-24,45;UBERON:0003061,1.02e-24,45;UBERON:0003929,9.97e-20,55;UBERON:0002368,7.45e-18,60;UBERON:0002530,2.88e-16,65;UBERON:0000490,5.60e-16,66;UBERON:0005911,3.67e-15,69;UBERON:0000949,2.06e-14,72;UBERON:0001041,1.09e-12,80;UBERON:0003081,1.94e-11,87;UBERON:0004921,4.84e-08,114;UBERON:0001007,7.48e-08,116;UBERON:0001555,7.48e-08,116;UBERON:0007026,7.48e-08,116;UBERON:0004119,1.14e-07,118;UBERON:0000925,1.14e-07,118;UBERON:0006595,1.14e-07,118;UBERON:0000926,1.71e-07,120;UBERON:0004120,1.71e-07,120;UBERON:0006603,1.71e-07,120|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,1.40788722151667,0.234064526321993,0.68487187290202,0.0797721589953364,4.96482116800497,1.39872643870396,0,0,0,0.473193248037357,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,4.35217285206807,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17875767294343,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0.288030006257865,6.32022241256356,1.21635129174099,2.77319584345034,3.89762468933385,2.68540043501222,3.9736270956253,4.68762253127878,4.87375439676105,4.34155734777035,4.95344243257499,3.2264379243789,3.8983152295901,4.2333210321745,6.89573722871257,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Cd3e}}
|EntrezGene=12501
|HGNC=
|MCL_coexpression_id=33
|UniProt=P22646,A6H6M1
|association_with_transcript=-218bp_to_ENSMUST00000102832,NM_007648,uc009pez.1_5end
|description=CAGE_peak_2_at_Cd3e_5end
|id=chr9:44817891..44817909,-
|ontology_enrichment_celltype=CL:0000791!5.54e-15!9;CL:0000789!5.54e-15!9;CL:0002420!5.54e-15!9;CL:0002419!5.54e-15!9;CL:0000790!5.54e-15!9;CL:0000624!2.62e-13!8;CL:0000838!4.99e-13!12;CL:0000084!6.90e-12!11;CL:0000827!6.90e-12!11;CL:0000542!7.58e-12!13;CL:0000051!7.58e-12!13;CL:0000893!4.29e-10!6;CL:0002489!4.29e-10!6;CL:0000898!4.29e-10!6;CL:0000809!4.29e-10!6;CL:0000810!4.29e-10!6;CL:0000895!4.29e-10!6;CL:0000808!4.29e-10!6;CL:0000894!4.29e-10!6;CL:0000806!4.29e-10!6;CL:0000807!4.29e-10!6;CL:0000805!4.29e-10!6;CL:0002425!4.29e-10!6;CL:0002436!4.29e-10!6;CL:0002427!4.29e-10!6;CL:0002428!4.29e-10!6;CL:0002429!4.29e-10!6;CL:0002433!4.29e-10!6;CL:0002431!4.29e-10!6;CL:0002432!4.29e-10!6;CL:0000738!1.60e-08!17;CL:0002087!1.60e-08!17;CL:0002031!1.45e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000791,2.85e-16,9;CL:0000789,2.85e-16,9;CL:0002420,2.85e-16,9;CL:0002419,2.85e-16,9;CL:0000790,2.85e-16,9;CL:0000084,3.09e-13,11;CL:0000827,3.09e-13,11;CL:0000624,7.07e-13,8;CL:0000838,4.27e-12,12;CL:0000542,3.95e-11,13;CL:0000051,3.95e-11,13;CL:0000738,2.12e-08,17;CL:0002087,2.12e-08,17;CL:0000893,8.59e-07,6;CL:0002489,8.59e-07,6;CL:0000898,8.59e-07,6;CL:0000809,8.59e-07,6;CL:0000810,8.59e-07,6;CL:0000895,8.59e-07,6;CL:0000808,8.59e-07,6;CL:0000894,8.59e-07,6;CL:0000806,8.59e-07,6;CL:0000807,8.59e-07,6;CL:0000805,8.59e-07,6;CL:0002425,8.59e-07,6;CL:0002436,8.59e-07,6;CL:0002427,8.59e-07,6;CL:0002428,8.59e-07,6;CL:0002429,8.59e-07,6;CL:0002433,8.59e-07,6;CL:0002431,8.59e-07,6;CL:0002432,8.59e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!4.36e-29!29;UBERON:0002370!6.58e-29!23;UBERON:0000974!6.58e-29!23;UBERON:0004807!6.58e-29!23;UBERON:0005058!6.58e-29!23;UBERON:0003351!6.58e-29!23;UBERON:0009113!6.58e-29!23;UBERON:0003295!6.58e-29!23;UBERON:0009722!6.58e-29!23;UBERON:0005562!6.58e-29!23;UBERON:0007690!6.58e-29!23;UBERON:0006562!1.88e-27!24;UBERON:0003408!1.88e-27!24;UBERON:0001557!1.88e-27!24;UBERON:0001042!1.88e-27!24;UBERON:0008814!1.88e-27!24;UBERON:0009145!1.88e-27!24;UBERON:0000065!8.03e-26!41;UBERON:0001004!5.06e-25!42;UBERON:0000072!9.79e-24!27;UBERON:0002193!4.95e-20!48;UBERON:0002390!8.72e-20!45;UBERON:0003061!8.72e-20!45;UBERON:0000063!8.53e-19!35;UBERON:0005057!1.16e-13!51;UBERON:0005911!2.73e-12!69;UBERON:0002405!1.92e-11!70;UBERON:0003081!4.63e-11!88;UBERON:0001041!5.30e-10!92;UBERON:0000077!6.37e-10!97;UBERON:0002368!2.02e-09!60;UBERON:0003929!8.95e-09!55;UBERON:0001048!1.25e-08!147;UBERON:0002530!2.96e-08!65;UBERON:0004921!6.58e-08!126;UBERON:0004185!6.58e-08!126;UBERON:0000926!1.05e-07!193;UBERON:0004120!1.05e-07!193;UBERON:0006603!1.05e-07!193;UBERON:0001007!1.18e-07!128;UBERON:0001555!1.18e-07!128;UBERON:0007026!1.18e-07!128;UBERON:0004119!2.08e-07!130;UBERON:0000925!2.08e-07!130;UBERON:0006595!2.08e-07!130;UBERON:0000064!2.40e-07!99;UBERON:0003104!4.39e-07!131;UBERON:0009142!4.39e-07!131;UBERON:0000949!6.55e-07!72
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.16e-51,23;UBERON:0000974,7.16e-51,23;UBERON:0004807,7.16e-51,23;UBERON:0005058,7.16e-51,23;UBERON:0003351,7.16e-51,23;UBERON:0009113,7.16e-51,23;UBERON:0003295,7.16e-51,23;UBERON:0009722,7.16e-51,23;UBERON:0005562,7.16e-51,23;UBERON:0007690,7.16e-51,23;UBERON:0006562,1.20e-48,24;UBERON:0003408,1.20e-48,24;UBERON:0001557,1.20e-48,24;UBERON:0001042,1.20e-48,24;UBERON:0008814,1.20e-48,24;UBERON:0009145,1.20e-48,24;UBERON:0000072,5.89e-43,27;UBERON:0004177,8.15e-40,29;UBERON:0005057,8.15e-40,29;UBERON:0000077,1.53e-32,35;UBERON:0007811,1.45e-31,36;UBERON:0000065,2.17e-27,41;UBERON:0001004,1.13e-26,42;UBERON:0002193,3.67e-26,48;UBERON:0002405,3.67e-26,48;UBERON:0000153,5.43e-26,43;UBERON:0002390,1.02e-24,45;UBERON:0003061,1.02e-24,45;UBERON:0003929,9.97e-20,55;UBERON:0002368,7.45e-18,60;UBERON:0002530,2.88e-16,65;UBERON:0000490,5.60e-16,66;UBERON:0005911,3.67e-15,69;UBERON:0000949,2.06e-14,72;UBERON:0001041,1.09e-12,80;UBERON:0003081,1.94e-11,87;UBERON:0004921,4.84e-08,114;UBERON:0001007,7.48e-08,116;UBERON:0001555,7.48e-08,116;UBERON:0007026,7.48e-08,116;UBERON:0004119,1.14e-07,118;UBERON:0000925,1.14e-07,118;UBERON:0006595,1.14e-07,118;UBERON:0000926,1.71e-07,120;UBERON:0004120,1.71e-07,120;UBERON:0006603,1.71e-07,120
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,1.40788722151667,0.234064526321993,0.68487187290202,0.0797721589953364,4.96482116800497,1.39872643870396,0,0,0,0.473193248037357,0.411343300817216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,4.35217285206807,4.03312558970957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17875767294343,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.292399974850665,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0.341741761595705,0,0,0,0.27338845544205,0.457556346413045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0.209718688851422,0,0.288030006257865,6.32022241256356,1.21635129174099,2.77319584345034,3.89762468933385,2.68540043501222,3.9736270956253,4.68762253127878,4.87375439676105,4.34155734777035,4.95344243257499,3.2264379243789,3.8983152295901,4.2333210321745,6.89573722871257,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p2@Cd3e
}}

Revision as of 17:59, 14 September 2013

Short description:p2@Cd3e
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cd3e_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: -218bp_to_ENSMUST00000102832, NM_007648, uc009pez.1_5end
EntrezGene:Cd3e
Link to Zenbu:ZENBU


View on UCSC genome browser


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








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