FFCP PHASE1:Hg19::chr1:16160993..16161014,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:16160993..16161014,+ | |||
|id=chr1:16160993..16161014,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.19e-17!53;CL:0000051!1.19e-17!53;CL:0000838!3.39e-17!52;CL:0000084!8.01e-12!25;CL:0000827!8.01e-12!25;CL:0000791!4.65e-10!18;CL:0000789!4.65e-10!18;CL:0002420!4.65e-10!18;CL:0002419!4.65e-10!18;CL:0000790!4.65e-10!18;CL:0000738!9.09e-10!140;CL:0000037!1.27e-09!172;CL:0000566!1.27e-09!172;CL:0000988!9.43e-09!182;CL:0002032!7.40e-08!165;CL:0000837!7.40e-08!165;CL:0002031!4.58e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.40e-11;53!CL:0000791;5.99e-10;18!CL:0000789;5.99e-10;18!CL:0002419;5.99e-10;18!CL:0000624;2.62e-09;6!CL:0000236;4.92e-09;13!CL:0000084;4.73e-08;25!CL:0000898;2.73e-07;3!CL:0000623;9.89e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.61e-15,52;CL:0000542,9.27e-15,53;CL:0000051,9.27e-15,53;CL:0000791,4.99e-10,18;CL:0000789,4.99e-10,18;CL:0002420,4.99e-10,18;CL:0002419,4.99e-10,18;CL:0000790,4.99e-10,18;CL:0000624,2.22e-09,6;CL:0000236,2.16e-08,14;CL:0000738,3.10e-08,136;CL:0000084,4.32e-08,25;CL:0000827,4.32e-08,25;CL:0000037,2.41e-07,168;CL:0000898,2.44e-07,3;CL:0000623,7.30e-07,3;CL:0000825,7.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;6.40e-11;53!CL:0000790;5.99e-10;18 | |||
|ontology_enrichment_disease=DOID:305!1.43e-09!106;DOID:162!2.00e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.10e-07,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.136874425072884,0,0.458480434487708,0.328402357799783,0.393553906568396,0.393364276848904,0,0.309632246632152,1.83884244895785,0.6024118375565,1.10926203050036,1.31694240986513,0.710846162437108,1.46800219667424,1.10799081706375,0,1.73608696572681,0,0.32389366601898,0,0,0,0.242584061187816,0.697287110717054,0,0,0,0,0,0,0.645484683583826,0,0.564727018627814,0,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0.628975936525128,0.336985893439485,0.450530678524519,0.16072558669708,0.285012743741249,0,0.182664153764634,0,1.09227722252426,4.44754626931777,8.10787422876364,1.60158394814405,0,0,1.90810750907073,0.569212969109448,1.76171156811282,1.14681968437569,0,0.560508562981536,0.790152254325231,0.786839080455332,2.75107533924415,3.28962398399215,1.17030546773475,5.54067853277104,4.2610302516126,1.94826728407911,0.445641827540694,2.06224135232386,1.77227115666897,1.89562704635511,0.128091319725675,0.910415432919148,0.493313713811028,1.93445012450094,1.44901542867526,1.92772532110679,1.87278579662799,0,0.113309342697566,1.53288197440768,1.03088233644789,1.01207876807801,0.95569624297229,1.95325036156926,2.85135613334512,0.451725357233318,0.255973222308837,1.24930726552346,0.236777252044017,0.821127996921047,0.80642697289893,1.06976078313403,2.31719046212478,0,0.670700859703636,0.255725123687061,0,0,0,0.795285947051099,0,0.283604451492204,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0.174129737299267,0.132957960518865,0.953962497221368,1.14398982156026,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0,0,0,0.488124115096339,0,0.81014194788176,0.17859945656816,0.22452937262617,0,3.06633274931766,0,0.183201743930407,1.31780417436063,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0.853815942907168,1.72288698817931,0.69716365721711,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.661763836394364,0.217879444092406,0.237270619111097,0.404493924480493,0.196221465125346,0.769494313892781,0,0,0.4115740113314,0,0,0,0,2.20731549707325,1.10689594688802,0,0.109750285408626,2.24803506515239,0,0.185176890317059,0,0,0,0.115930404975077,0,0.288732895522148,0.462985512576611,0.380508304469197,4.74122638775565,6.00940313466411,0,0.234004265139238,0.297262324577456,0,0,0.141775097242386,0,0,0,0,0.44024217006613,2.69526550203004,1.15295962733569,3.28230326908588,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0.179060963239896,0.560425719967636,1.57624608161542,2.15627574859517,1.41177339907723,0,1.30139853857622,0,0.502548796003046,0,1.49801404789436,0,2.07207756718018,0,0,0,0.415941723061614,0.178428988797162,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0.413536052245775,0.647142602455851,0.960548020230999,2.12189300012382,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0.276242966807689,0.114814448164607,0,0,0.451199612907412,0.0770153371044148,1.56869953835371,1.46139224653261,0.105551628892876,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0.325378394664303,0.412164046590889,0.27470839445503,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0.460511024178389,0,0,0,0.0852266274161009,0.0890320356467374,0.661139661443912,0.192190067365106,1.40373983744043,0.6069466851333,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0.359744915166629,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0.876901770507525,0,0,0.202910376962704,1.239293992399,0,0.286822704408103,0,0,0,0,0,0,0,0.192444225451024,0,1.08890984861323,0.470719003883896,0.43050537267123,0,0,0.229723400206959,1.52234282769651,0,1.70894156152249,0,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0.490080431962063,0.929015875628594,0,0.995985806877798,0.159426272728822,0.199579371432817,0.191505370132367,1.90506224451495,0.324621940274555,0.280797178113459,0.456469358066384,0.156679895773023,0,0.338583555603207,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,1.4098700508785,0.935702702041099,0.146508179271894,0,0.557216921387392,0.568272293612826,0.23874448473769,0.296964680832639,0.307160702099232,0,0.281338832821026,0,0.988823245360557,0.422250816255987,0.19924798825107,0,0,0.102268682502155,0.615424027305347,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,0.0927680981618513,1.99613798001194,0.520855522170466,0.962059999958153,0,0.1137934482855,1.77977555204936,0.236387681767936,1.03423011972439,0,0.17362499493329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| |||
|short_description=p@chr1:16160993..16161014,+ | |||
}} |
Revision as of 16:33, 10 January 2014
Short description: | p@chr1:16160993..16161014, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:16160993..16161014, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.61e-15 | 52 |
lymphocyte | 9.27e-15 | 53 |
common lymphoid progenitor | 9.27e-15 | 53 |
mature alpha-beta T cell | 4.99e-10 | 18 |
alpha-beta T cell | 4.99e-10 | 18 |
immature T cell | 4.99e-10 | 18 |
mature T cell | 4.99e-10 | 18 |
immature alpha-beta T cell | 4.99e-10 | 18 |
CD4-positive, alpha-beta T cell | 2.22e-09 | 6 |
B cell | 2.16e-08 | 14 |
leukocyte | 3.10e-08 | 136 |
T cell | 4.32e-08 | 25 |
pro-T cell | 4.32e-08 | 25 |
hematopoietic stem cell | 2.41e-07 | 168 |
naive T cell | 2.44e-07 | 3 |
natural killer cell | 7.30e-07 | 3 |
pro-NK cell | 7.30e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.10e-07 | 14 |