FFCP PHASE1:Hg19::chr1:158656373..158656385,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6708 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11272 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=12bp_to_ENST00000467387_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_5_at_SPTA1_5end | |||
|id=chr1:158656373..158656385,- | |||
|ontology_enrichment_celltype=CL:0000764!4.27e-14!2;CL:0000765!4.27e-14!2;CL:0000050!4.27e-14!2;CL:0000038!4.27e-14!2;CL:0000558!4.27e-14!2;CL:0000547!4.27e-14!2;CL:0000549!4.27e-14!2;CL:0000550!4.27e-14!2;CL:0000552!4.27e-14!2;CL:0000319!3.40e-07!1;CL:0000763!7.97e-07!112;CL:0000049!7.97e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.35e-32;2!CL:0000558;3.35e-32;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.35e-32,2;CL:0000765,3.35e-32,2;CL:0000050,3.35e-32,2;CL:0000038,3.35e-32,2;CL:0000558,3.35e-32,2;CL:0000547,3.35e-32,2;CL:0000549,3.35e-32,2;CL:0000550,3.35e-32,2;CL:0000552,3.35e-32,2;CL:0000763,3.78e-13,108;CL:0000049,3.78e-13,108;CL:0002032,1.60e-08,161;CL:0000837,1.60e-08,161;CL:0000037,3.98e-08,168;CL:0000988,1.16e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.31e-27!8;DOID:8692!2.34e-22!31;DOID:1240!2.41e-17!39;DOID:2531!8.90e-13!51;DOID:0060083!8.90e-13!51;DOID:8552!9.71e-08!1;DOID:3030!3.40e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.51e-47;8!DOID:8692;4.60e-31;31!DOID:1240;3.99e-21;39!DOID:8552;1.41e-16;1!DOID:2531;4.01e-14;51!DOID:0060083;4.01e-14;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.77e-47,8;DOID:8692,9.18e-31,31;DOID:1240,2.35e-24,39;DOID:2531,1.68e-18,51;DOID:0060083,1.68e-18,51;DOID:8552,1.21e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0002134!2.07e-07!1;UBERON:0005208!2.07e-07!1;UBERON:0005946!2.07e-07!1;UBERON:0005965!2.07e-07!1;UBERON:0002078!2.07e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.3290981829718,52.548525656005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,11.0778659052941,0.811367035427949,0,4.22961015263549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65392709320438,4.06072189110925,2.15668787749514,2.85296697858933,10.6262090325544,9.05938500188159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,13.2506888912221,0,0,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0.966868319603658,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0.186224142887574,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@SPTA1 | |||
}} |
Revision as of 21:36, 10 January 2014
Short description: | p5@SPTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SPTA1_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 12bp_to_ENST00000467387_5end |
EntrezGene: | SPTA1 |
HGNC: | 11272 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.35e-32 | 2 |
erythroblast | 3.35e-32 | 2 |
megakaryocyte-erythroid progenitor cell | 3.35e-32 | 2 |
erythroid progenitor cell | 3.35e-32 | 2 |
reticulocyte | 3.35e-32 | 2 |
proerythroblast | 3.35e-32 | 2 |
basophilic erythroblast | 3.35e-32 | 2 |
polychromatophilic erythroblast | 3.35e-32 | 2 |
orthochromatic erythroblast | 3.35e-32 | 2 |
myeloid cell | 3.78e-13 | 108 |
common myeloid progenitor | 3.78e-13 | 108 |
hematopoietic oligopotent progenitor cell | 1.60e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-08 | 161 |
hematopoietic stem cell | 3.98e-08 | 168 |
hematopoietic cell | 1.16e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.77e-47 | 8 |
myeloid leukemia | 9.18e-31 | 31 |
leukemia | 2.35e-24 | 39 |
hematologic cancer | 1.68e-18 | 51 |
immune system cancer | 1.68e-18 | 51 |
chronic myeloid leukemia | 1.21e-16 | 1 |