FFCP PHASE1:Hg19::chr1:204380954..204380965,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84919 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14951 | |||
|TSSclassifier=strong | |||
|UniProt=F5H5C9 | |||
|association_with_transcript=-9bp_to_ENST00000543650_5end | |||
|description=CAGE_peak_4_at_PPP1R15B_5end | |||
|id=chr1:204380954..204380965,- | |||
|ontology_enrichment_celltype=CL:0000738!1.44e-18!140;CL:0002031!5.29e-17!124;CL:0000988!5.96e-17!182;CL:0000037!9.29e-17!172;CL:0000566!9.29e-17!172;CL:0002032!3.03e-16!165;CL:0000837!3.03e-16!165;CL:0002087!5.08e-15!119;CL:0000860!2.44e-13!45;CL:0002057!3.84e-13!42;CL:0000766!4.81e-13!76;CL:0000839!5.77e-12!70;CL:0000763!1.27e-11!112;CL:0000049!1.27e-11!112;CL:0000557!1.33e-11!71;CL:0002009!1.12e-10!65;CL:0002194!7.01e-10!63;CL:0000576!7.01e-10!63;CL:0000040!7.01e-10!63;CL:0000559!7.01e-10!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-13;33!CL:0002057;2.21e-13;33!CL:0000473;4.96e-09;39!CL:0000234;4.96e-09;39!CL:0000576;5.76e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.40e-18,136;CL:0000988,8.92e-18,177;CL:0002031,2.96e-17,120;CL:0000037,4.47e-17,168;CL:0002032,1.69e-16,161;CL:0000837,1.69e-16,161;CL:0002087,5.57e-15,115;CL:0000860,1.61e-13,42;CL:0002057,1.61e-13,42;CL:0000766,1.83e-13,72;CL:0000839,3.02e-12,66;CL:0000557,4.68e-12,67;CL:0000763,4.81e-12,108;CL:0000049,4.81e-12,108;CL:0002009,6.96e-11,61;CL:0000473,2.15e-10,48;CL:0000234,2.15e-10,48;CL:0002194,4.88e-10,59;CL:0000576,4.88e-10,59;CL:0000040,4.88e-10,59;CL:0000559,4.88e-10,59 | |||
|ontology_enrichment_development_v019=CL:0002057;2.92e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.17e-12!102;UBERON:0003061!4.17e-12!102;UBERON:0001474!6.10e-10!86;UBERON:0002193!1.10e-09!112;UBERON:0002371!2.40e-09!80;UBERON:0004765!3.63e-08!101;UBERON:0001434!3.63e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.36e-13,98;UBERON:0003061,7.36e-13,98;UBERON:0002193,1.82e-10,108;UBERON:0001474,3.68e-10,82;UBERON:0002371,1.34e-09,76;UBERON:0004765,2.67e-08,90;UBERON:0002405,3.28e-08,93;UBERON:0001434,1.02e-07,100 | |||
|phase1_expression=1.09007027562334,0.214100523890983,1.12763523276777,1.0007329835313,0.446961094427288,0.872338524100369,2.53299878168311,0,0.783556884599516,0.737201809504527,0.697801167972428,1.31064823278103,0.263766978228454,1.48519623552056,1.32558950291166,1.34465029290355,0,0,0.487932798790507,1.96993692922861,0.816002764977012,1.25381888591235,1.14494394852423,1.09499540058307,1.12988375635323,2.36881557818649,2.29881650459848,2.20390187678302,0.786728553697808,3.45446458287491,3.2511385896376,0.919421224478927,0.30120591877825,1.47901604066715,0.92960640696362,1.42169232487422,0.587200878669695,1.10799081706375,1.80490002723128,0.651032612147555,1.56740831967947,0.971680998056939,1.28787783817093,1.74477886535478,3.40088349319928,2.66842467306598,1.39457422143411,1.6446715520873,1.85823822537062,5.75384784644301,6.40401766322752,4.49316236788312,3.7922024881028,3.22742341791913,1.35426486594342,3.57660445130949,1.91034305040492,2.9214052977861,2.75475503133812,4.49300637906531,5.75403413219137,2.96866170168044,3.19141852194611,4.68847225585964,3.77272010217159,3.40431134814684,4.9825779919646,6.28121663141858,4.69334626578181,3.9093992046921,2.42159801053347,6.2607198117886,4.1140110367315,1.69004229049553,0.850417199860174,1.46761051855863,2.02191536063691,1.95229960693958,1.44653028027372,2.28010194992999,1.59133341759272,1.0959849225878,1.75996244461323,1.09227722252426,3.55803701545422,2.13365111283254,2.80277190925209,1.14950487990897,0.661044872784862,0,2.27685187643779,2.34894875748376,4.96955196562797,2.64342657158052,1.12101712596307,2.37045676297569,3.14735632182133,1.17903228824749,3.70082698199117,1.5046784585161,3.2592226663359,1.89379122293893,0,1.33692548262208,2.94605907474837,3.1014745241707,1.62482318259009,2.5618263945135,2.21100890851793,1.31550323682941,1.10540007114339,2.02862160014537,2.66915813691709,2.40786745280742,2.09071047609954,1.13309342697566,1.91610246800961,1.71813722741315,1.77113784413652,2.54852331459277,0.651083453856419,1.90090408889675,1.6563263098555,1.4078527226986,0,1.4206635122641,0.821127996921047,3.02410114837099,2.67440195783507,3.18613688542158,0,2.68280343881454,1.40648818027883,1.44575660953827,1.00267582127178,1.15877215168659,0.795285947051099,1.45990461090791,1.22895262313288,0.221729397462564,1.22968699970376,2.0956652079634,0,1.11235332835329,2.27183175558278,1.56716763569341,0.664789802594326,2.38490624305342,2.28797964312051,1.11437250398869,0,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0.258416759169329,1.06729878806013,0.33472061276467,0.402829317109147,0,0.732186172644509,0,0,0.17859945656816,0.673588117878509,0.900891843866578,0,0.949265659568129,0.549605231791222,6.58902087180316,3.87780264148325,1.3082821564276,2.48485975847659,0.886413581652058,1.05927344650575,1.43418310374407,1.41867352879343,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,1.48181739276657,0.326923806226917,0.908144565869588,2.30470369792,1.64025002283658,0.624320153660641,1.1409436430889,1.64393548606981,1.29177948508141,1.13311061057692,0.98315564691574,0.61246251376468,1.47401180774122,1.03325781175765,1.18800285728205,1.97813543422845,0.910161361938026,1.43723628363248,0.841680569770331,0.625592599359821,1.10825646193673,0.438977620880838,1.22595118319608,3.00476117813194,1.13432183160021,0.358779271377724,0.640672166455702,1.48352330811693,1.50045548042201,0.824420233907511,0.515281080091258,0.744467425326359,0.843881661206331,0.584622030967192,0.504867548488229,0.736399189138395,0.80823028409406,0,0.806016785821122,0.67824236924195,0.386521706326594,0.818238361772504,0.860413786167011,1.95157929807353,1.59035721985782,1.39432731443422,1.24393266018445,0.504641701751257,0.36497735907583,0,1.28648187638577,1.38134921352481,0.928735856063958,0,1.53798840051797,0.842923450390509,1.20505514941741,1.21323370005633,1.08939722046203,1.18635309555548,0.269662616320329,0.588664395376038,1.15424147083917,0,0,0,0,1.26755034821831,0.982827216677626,2.36315962672562,0.441463099414651,0.983907508344908,1.02940686179115,0.219500570817251,0,0.603173834469785,0.833296006426766,0.325808305310325,1.03993478527958,1.44331342025273,1.507095264676,2.23076519048061,0.577465791044295,0,0.190254152234598,3.95102198979638,2.57545848628462,0.738651018262192,0.702012795417713,1.0404181360211,0,0.671928512795438,0.567100388969546,0.806026704325635,1.16253575405585,0.383382679165211,1.47798971368783,1.67292024625129,10.7810620081201,8.50307725160072,8.96321277327298,0.380987365753014,1.52795370223311,1.17217447210047,0,0.925447434329912,0,0.285826432630578,1.00917975910825,1.30788020649984,1.0267360014933,0.646358578788889,0,0,0.531876233169741,1.04007436911366,0.514414748524284,0,0.799266537048298,0.714889968290738,0,0,0.65147236858747,1.77695974371273,0.791951872933429,1.50719688529793,0.871533458600294,0.799783929456456,1.2162378064119,1.00451418286425,0,0.239624855491583,1.14861935834114,1.42636905040718,0.144781306667579,1.02738161275192,1.07436577943937,0.896681151948218,2.1673383622212,2.37190332345469,2.82354679815446,2.28685161800217,2.60279707715243,2.31986643833309,2.01019518401218,0.637938751653163,3.74503511973591,0,2.48649308061621,1.10422342547226,0.500170521059677,1.08506009479894,1.45579603071565,1.07057393278297,0.788512075169673,1.40569697991256,0.902838299183157,0,0,0.664225598535437,1.84369168541703,0.955719759148911,1.56640925970192,1.71571711905428,3.51505644408909,2.80428461064202,2.98837161849644,1.81876542867756,0,1.81434175997808,1.48864684691266,0.767309866440312,1.40330047216537,0.640695746278505,0.511707249066704,1.60853921143608,0,2.15893571323718,1.06537035187876,1.56041596426237,0.519254429183621,1.16210378459959,0.604297247958111,1.20303882181971,0.368323955743585,1.14814448164607,0.364182336013434,1.44236856455367,0.902399225814824,0.385076685522074,0.784349769176855,0,0.527758144464379,0,0.170093705276516,0.215915916102139,0,0.812839312631559,1.50506932156456,1.01950509218015,0.831076008928724,1.11937377361089,1.75407901316748,2.3529190592241,0,1.64007322849853,0.650756789328606,2.16386124460217,1.55668090191184,1.56768049849117,0.574265537996172,1.30012049207304,1.6068392984416,2.03008508413456,1.3864375540318,1.07452572308291,0.827019434907183,1.50388342815583,0.870100163485371,0.852266274161009,1.51354460599453,0.661139661443912,0.960950336825531,0.638063562472921,1.51736671283325,1.39453664789186,0.94443704049192,0,0.616067160352178,1.06461206063404,0.869932992075073,0,0.858749320451947,1.116475108079,0,0.762520775695299,1.535386747868,2.99557291623744,1.27281299170375,0,0.539617372749944,0.274537029736055,1.06031162111118,0.202182481573316,0,2.52755073743389,0.48763373908959,0.731140468893853,1.05650146756755,1.22849920267187,1.83827061539827,1.13008116620243,3.30819206127675,0,0.438450885253763,1.73632660280006,1.31178950409327,0.405820753925408,0.92947049429925,0.563391205064483,1.86434757865267,1.27723753317057,0.7133421029625,1.06428319221179,1.05553817648832,1.97576935775941,0.75894634753143,0.699869440489966,0.48111056362756,0.670302275535787,1.08890984861323,1.50630081242847,0,1.68471475667626,0.886860307073351,0.229723400206959,1.52234282769651,0,3.41788312304498,1.90585420366231,2.46817363851717,1.29694662238543,0,2.37937552888281,1.28188885352968,1.92495971052672,0.735120647943095,0.929015875628594,1.298422916788,1.4939787103167,2.07254154547469,0.59873811429845,0.766021480529467,1.69338866179106,1.29848776109822,1.12318871245384,1.14117339516596,1.72347885350326,0,0.677167111206413,1.4452926759333,1.81619736471943,1.27753871307098,0.687010689511529,3.6868891717015,2.90778940260141,2.33588798396672,2.14926904942244,1.11362469558097,0,1.08182271390393,1.33228787199128,0,2.43282702530686,0.73254089635947,1.33496573924465,2.78608460693696,1.13654458722565,1.67121139316383,1.18785872333055,1.53580351049616,0.994147647766298,0.984685914873589,0.445234820091624,3.29607748453519,1.68900326502395,2.59022384726391,1.93398740871803,1.76352923497993,1.02268682502155,2.21552649829925,0.933118762985422,0.629078458031288,5.19161406559267,2.55786185113436,0.690503839458535,0,1.11136990144637,2.90799823828566,2.69027484669369,0,1.30213880542617,3.14855999986305,2.17499872630438,5.80346586256048,0.762760950878299,1.65471377237555,2.06846023944879,0.583209226766509,2.60437492399938,2.65722415744152,1.20596438625408,6.10326945268333,3.20679853800551,4.13766666534966,1.31631238292384,1.52513848926586,0.975966209950223,1.38510465306835,1.59518878185802,2.53620294826866,0.987334088507493,1.62971057883012,3.19001159731919,0.915975934018623,2.13213910407454,0,1.8837630767403,1.82832850090172,3.15833924864053,1.9606253431774,1.67821586975843,0.75901493089674,3.01979500062719,2.3209787098083,1.14262965711403,0.141353071433941,0.649165919226273,2.98578579323551,1.94606641907346,4.888241159469,4.44781693020933,3.33622635155558,2.92381458615275,2.15683625538167,0,1.87411556580271,0.182454789215666,1.76098157038881,0.728341138602278,1.18375320854817,4.83962864194656,2.14250933141343,1.95878396848313,0.300646838828985,0.829505531177977,1.32930774541437,0.992975867626496,0.627865836814451,1.19472429772959,1.70765727617876,0.970722711091971,2.08271686002157,0.587954384486266,0.435296032902013,2.09672001890436,1.0319161948297,1.54810130062536,2.33885814675794,1.31384731285135,1.45483524732629,4.05978182780901,1.35588444468319,1.50746117111426,0.19871461170299,2.15256706249988,1.17330829640882,0.801588202515337,1.70762395791482,1.19885765749278,1.87317542300338,1.03082936549324,1.71594997861965,1.7286575758578,2.48505071130865,0.942776138467182,0.815425236441684,1.67364554099733,1.52997326454483,2.31160471921215,1.20084057741958,1.36905378891993,0,1.71906176567983,0.788662062837943,0.837847203816763,0.458320848023367,0.717873024576814,1.59743200399193,0.429226048136571,1.11585728720936,1.74677028465488,0.720599767084807,0,0.630265458457789,0.659326867049332,0.404421263125109,1.77169466726548,1.18542664892098,0.795229689809303,1.49823746722733,1.12527203925513,1.2378549293751,0.83088067605837,2.92466059016951,3.0952078182318,1.94398581305679,1.0063040627978,0.945668487590378,1.41627387964495,1.5840050477911,1.79287339332845,0.575745591958336,1.42939065274673,0,1.77987976358325,0.542999601753713,0.864221491201268,0.326587360109409,0,2.21649806023215,0.511164065356265,0.113312091520126,2.19828350517124,1.32506888912221,1.42211251997706,0.92562821219883,2.22412889249628,0.704815022316672,2.13574825135389,1.57204305099666,1.65695622138878,1.48849806543585,2.76656284657122,1.58330377895165,0,0.544017803369474,2.7575888342497,4.28883807468846,1.96723578425883,3.76929831000562,1.77213635993397,1.83039397352945,1.001527445652,1.14681839138014,1.22021956690538,2.17337410294842,4.56550495289562,0.249960815924213,3.63957882099955,1.99825733481477,0.470531639396343,2.34167452903441,2.02889440055155,0.895528817321244,0,0.554805861502613,0.757612021100357,1.0062716070103,1.77962244319307,0,1.20984739010591,1.86524640699337,0.887130899937803,0.318593534327405,2.24901556081802,0.931577741257556,2.07353103920428,1.86089200190596,2.08698024724694,1.05180326298053,0.761610424337591,0.813741466409323,1.09109195521536,0.429642228169954,0.928067519756987,1.59238355479446,0.400027764663154,0.686791410365586,1.01024846629776,0,1.54095864325843,0.857766365499703,1.82696004375648,1.58694147858591,0,0.734210113519403,0.71635536432595,0,1.75427239662966,0.530067437837643,0.192914038270915,0.844712203265363,1.28120759293973,0.345430341731199,0.607719912354764,0.967809053062115,1.16916185303633,1.72724292407372,0.981392365535065,0.655219697692825,0.245772908753719,1.47918486351039,2.19986135440423,1.38699248602383,2.2387947355906,0,2.20927140302209,0.419638523158333,0.622077260032973,2.68578179737669,5.39124056983409,2.51625506969434,2.07498312564826,1.18812770967818,2.55089904122019,1.61116493536703,2.79322458986622,0.954013051960256,1.41951141002256,3.20228299314188,0.705351887381368,1.531227386766,1.92687675289379,1.41696576325585,0.478901577171454,1.02558182120378,0.756215088665154,3.38870537074668,1.29180516505481,1.42769420259154,1.07962490351128,1.41563668017288,0.917142992608395,1.5018336599544,0.762764190934334,2.0710797781803,1.79024599904647,1.88025820873143,0.20170506870352,1.56302802246618,0.785720083444267,0.49131575253029,1.03499260351932,2.566428215499,0.781078098613847,0.826747186004736,2.28296916698065,0.546974809018219,1.09651553371436,0,1.23109871051734,1.66091155931474,1.07140367175657,1.3451348888753,1.21393120847326,0.91064876540519,2.30626162422861,0.921871900446234,1.02892805662451,1.69924332442079,2.30204707469972,1.53651993149159,2.11339663594931,1.02041020705668,1.25692471932802,0.560544326627578,0.913158720509496,2.59113109462346,0.47775168788705,1.85839014859306,3.00225862292181,1.51113852978563,1.21700790611806,0,1.45051314914126,1.19502933965765,2.07377898544228,1.29068207646083,2.48497201534187,1.87469490470147,2.54032230114557,1.14553434272025,0.31020638566432,1.91107787795487,0.671132590786754,1.27595303699816,1.09726132484042,0.647428837187895,0.718639647993729,2.3196288626764,0.971421986118279,3.27515248846948,0.994753875806841,1.54596118010839,3.16249029709088,0.989464650708862,2.11347980993343,2.08370226891451,1.31135736302374,0,1.47088993052343,2.59244201811789,1.17785080268967,0.891139200981258,1.6906229103336,1.35941691750254,2.06764619555678,1.86927875123374,1.79894080664872,0.535661815816973,0.352894871715692,1.68506870047253,0,1.83491713361816,1.86341458096887,2.20880187070458,2.24371917630019,3.05445483238264,1.0580536810308,0.371995018166751,0.924351257262837,1.73050624849516,1.00933139868063,1.09265571963696,2.02717601618299,3.05966489225945,1.3360870263278,4.13527047906802,2.005660314339,1.51557396436479,1.87574891109325,0.829169439458779,1.24119595034274,1.70587185520785,1.1903221573187,2.64814530327625,1.73809200028402,1.45771421354797,1.52753179867596,2.02117188958219,1.08858373948481,0,2.08791364345221,1.5061663132462,0.665320713092027,1.30245229777559,2.66818364694289,1.9307228228694,1.07790242527904,0,1.1001729976458,1.62758471326295,1.33151354837103,1.20764276154616,1.28227396921293 | |||
|short_description=p4@PPP1R15B | |||
}} |
Revision as of 23:37, 10 January 2014
Short description: | p4@PPP1R15B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PPP1R15B_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000543650_5end |
EntrezGene: | PPP1R15B |
HGNC: | 14951 |
UniProt: | F5H5C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.40e-18 | 136 |
hematopoietic cell | 8.92e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 2.96e-17 | 120 |
hematopoietic stem cell | 4.47e-17 | 168 |
hematopoietic oligopotent progenitor cell | 1.69e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-16 | 161 |
nongranular leukocyte | 5.57e-15 | 115 |
classical monocyte | 1.61e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-13 | 42 |
myeloid leukocyte | 1.83e-13 | 72 |
myeloid lineage restricted progenitor cell | 3.02e-12 | 66 |
granulocyte monocyte progenitor cell | 4.68e-12 | 67 |
myeloid cell | 4.81e-12 | 108 |
common myeloid progenitor | 4.81e-12 | 108 |
macrophage dendritic cell progenitor | 6.96e-11 | 61 |
defensive cell | 2.15e-10 | 48 |
phagocyte | 2.15e-10 | 48 |
monopoietic cell | 4.88e-10 | 59 |
monocyte | 4.88e-10 | 59 |
monoblast | 4.88e-10 | 59 |
promonocyte | 4.88e-10 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.36e-13 | 98 |
blood island | 7.36e-13 | 98 |
hemolymphoid system | 1.82e-10 | 108 |
bone element | 3.68e-10 | 82 |
bone marrow | 1.34e-09 | 76 |
skeletal element | 2.67e-08 | 90 |
immune system | 3.28e-08 | 93 |
skeletal system | 1.02e-07 | 100 |