FFCP PHASE1:Hg19::chr1:226187013..226187071,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163859 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26643 | |||
|TSSclassifier=strong | |||
|UniProt=Q6IQ49,C9JIQ2 | |||
|association_with_transcript=0bp_to_ENST00000272091,ENST00000366817,ENST00000366818,NM_152608,uc001hpu.3,uc001hpv.2_5end | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_C1orf55_5end | |||
|id=chr1:226187013..226187071,- | |||
|ontology_enrichment_celltype=CL:0000037!7.05e-35!172;CL:0000566!7.05e-35!172;CL:0002032!2.20e-31!165;CL:0000837!2.20e-31!165;CL:0000988!3.36e-31!182;CL:0000738!1.31e-29!140;CL:0002031!9.93e-22!124;CL:0000763!2.22e-20!112;CL:0000049!2.22e-20!112;CL:0002087!1.30e-19!119;CL:0002057!9.34e-18!42;CL:0000860!5.57e-16!45;CL:0000766!3.45e-14!76;CL:0000557!1.11e-11!71;CL:0000839!2.93e-11!70;CL:0000542!3.36e-10!53;CL:0000051!3.36e-10!53;CL:0000838!7.30e-10!52;CL:0002009!1.19e-09!65;CL:0002194!9.05e-09!63;CL:0000576!9.05e-09!63;CL:0000040!9.05e-09!63;CL:0000559!9.05e-09!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.38e-13;33!CL:0002057;2.38e-13;33!CL:0000576;2.27e-10;48!CL:0000766;1.65e-08;69!CL:0002087;2.23e-08;104!CL:0000473;6.78e-08;39!CL:0000234;6.78e-08;39!CL:0000763;4.96e-07;100!CL:0000738;9.92e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.20e-36,168;CL:0000988,3.02e-33,177;CL:0002032,7.95e-33,161;CL:0000837,7.95e-33,161;CL:0000738,3.50e-31,136;CL:0002031,4.23e-23,120;CL:0000763,8.60e-22,108;CL:0000049,8.60e-22,108;CL:0002087,6.36e-21,115;CL:0000860,9.34e-18,42;CL:0002057,9.34e-18,42;CL:0000766,1.25e-15,72;CL:0000473,4.59e-13,48;CL:0000234,4.59e-13,48;CL:0000557,5.54e-13,67;CL:0000839,1.55e-12,66;CL:0002009,7.61e-11,61;CL:0000542,3.36e-10,53;CL:0000051,3.36e-10,53;CL:0002194,6.69e-10,59;CL:0000576,6.69e-10,59;CL:0000040,6.69e-10,59;CL:0000559,6.69e-10,59;CL:0000838,7.30e-10,52 | |||
|ontology_enrichment_development_v019=CL:0002057;5.88e-13;42 | |||
|ontology_enrichment_disease=DOID:162!1.35e-09!235;DOID:14566!1.97e-08!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.35e-09,235;DOID:14566,1.97e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.59e-15!102;UBERON:0003061!4.59e-15!102;UBERON:0002193!8.73e-13!112;UBERON:0001474!1.10e-09!86;UBERON:0002371!2.95e-09!80;UBERON:0002405!1.40e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.87e-16,98;UBERON:0003061,2.87e-16,98;UBERON:0002193,8.90e-14,108;UBERON:0001474,1.18e-10,82;UBERON:0002371,3.04e-10,76;UBERON:0002405,1.60e-09,93;UBERON:0004765,1.88e-07,90 | |||
|phase1_expression=15.0793054794562,13.7024335290229,16.0688020669407,16.0117277365009,16.0905993993824,13.9574163856059,0,8.2123583545488,8.61912573059467,14.989770126592,0,11.1405099786388,10.8144461073666,10.7676727075241,12.5931002776608,16.8081286612944,12.6565850885035,8.03341099426111,14.6379839637152,13.7895585046002,14.0760476958535,18.4938285672072,20.322755086305,13.2768192320698,17.199341624488,20.7080329576948,20.7714491308363,17.9460581395189,122.729654376858,92.119055543331,55.7338043937874,10.1136334692682,13.253060426243,21.0759785795069,27.0360530025253,18.19766175839,46.9760702935756,58.723513304379,47.1279451554833,56.4228263861215,19.7045617331133,12.9557466407592,20.3484698431007,23.5545146822895,24.1840603960838,29.5952554649136,36.4913587941925,48.1066428985536,58.5345040991746,94.3631046816653,99.9026755463492,115.40332818563,63.7779509362744,78.7491313972268,73.1303027609445,34.0718634572114,32.4758318568836,47.4166552179129,45.9125838556354,56.1625797383164,65.2123868315022,59.0433827334222,81.1817086520042,73.3106570916234,21.7656928971438,33.4757282567772,32.3867569477699,102.509455424751,111.075861623503,110.331933110199,21.1889825921679,35.7229306907938,43.0388846919603,28.7307189384241,36.9931481939176,32.2874314082899,46.6163819257955,39.9470534958407,51.5929133297627,40.7568223549985,29.2407515482662,35.9848382916329,35.1992488922645,26.2146533405823,26.6852776159066,25.6038133539904,27.2269271184488,33.33564151736,28.4249295297491,24.8053976179195,72.8592600460094,72.2301742926255,75.3078259406701,84.5896502905765,62.2164504909505,28.4454811557083,79.0773275857609,56.5935498358797,66.614885675841,22.0686173915695,60.9474638604814,50.1854674078817,44.8101475338196,21.167986808183,43.3070683988011,33.6731519767104,34.392090698157,19.8541545574796,21.32973299982,20.2258622662522,19.0681512272235,23.1842468588042,48.3414195908317,44.4117774628924,54.3584723785879,20.622300370957,52.1179871298613,46.0460776946724,49.0858202517836,28.6708872891687,24.0900877926875,19.9594929334159,32.2230754826434,30.2048402324427,28.7340671070395,21.3099526839615,24.6338399076314,74.1912815067015,62.3135656175572,66.3295769783219,9.75227465255847,12.7433163343691,13.4255689935707,15.5418835525363,13.536123587169,16.3676566425731,23.0632924644819,27.2515527369476,14.5583618432665,17.5166223995426,15.2832527106039,27.3746267790219,11.2931539370688,12.977455497455,14.2800853208061,16.0199358315326,10.5036788809903,106.843799688793,84.6552467954589,115.894740414824,18.2861414777369,7.74211135595512,18.3984465852025,14.1326985481002,9.22898759661793,10.4544855937226,14.4206526910399,18.6060066601917,16.3652480835887,29.1206933105263,19.7386365383482,10.6438094800592,21.2333990066907,12.8682078121054,11.3419872703446,14.4665559820209,17.0642323195889,13.963823579932,9.19899824795299,12.3404535743857,12.4577185872677,278.056680790093,267.568382262344,14.8271977728462,22.3637378262893,11.7766375848059,20.3910138452357,17.2101972449288,13.4773985235376,18.5023608046961,14.9448594021587,11.5933747756065,16.4941848761876,21.4189968590804,14.2211855708709,18.0115338897468,21.89468513024,26.478321797219,9.36480230490961,12.5503800739779,14.1976246524211,21.490513251809,16.5110403255494,13.4832774434159,16.7406420429012,12.5291003658003,15.6021929575406,17.8200428592308,15.5778165445491,10.0117749813183,8.62341770179486,14.3085696860956,15.7649335038675,21.3339368922821,20.1929705605185,17.7762921563431,13.0707111248739,15.1999125434428,32.8283033310617,14.5219024396626,20.5573944124775,15.9048280924733,19.7860856137803,27.0522567047911,13.0281799432113,22.2784758558471,20.2668970735293,27.0104138441203,16.292832059687,11.9618082045921,25.2056810686796,21.7624532171703,12.7170444232866,13.5282597214308,15.2737827530867,22.3707584403423,20.1256615113832,24.6505369077963,23.0064006881646,22.8054321033815,14.8869302016621,17.8838905947157,14.0804579096834,11.5783368874719,6.90674606762403,15.3241416250553,10.1063127433742,18.8107812063352,19.2186546689036,23.3780698986978,19.3014452281689,17.4303555273925,23.2525206728875,22.6516597709076,21.1919182335374,17.3136220625876,11.8104872739944,9.81692416624121,16.0513864419246,11.7606969108434,16.478154526838,12.7767538168091,23.6315962672562,26.487785964879,22.9988380075622,13.8969926341806,13.9382862468954,16.8602629886429,16.888867365154,17.314039244645,31.9292139204118,9.35941306751621,7.21656710126366,14.7231614318348,24.4210084010509,19.2007375522228,21.2973335785241,16.55211124441,16.5942923571448,11.1603201072333,14.5268033591564,13.3382431129365,11.8904929830983,23.4334584966942,11.5907668457213,12.7597587518148,30.6290147643741,19.4724738804355,12.2682457332868,110.356565288691,19.9869945210023,65.9303407419655,49.7213839288517,56.4303677415918,13.0805662241868,15.2795370223311,10.5495702489042,10.2643467613623,15.5269513982019,11.1126931402249,10.5755780073314,20.519988435201,20.4901232351642,14.8143337358319,21.7176482473067,10.7296933755565,17.751357803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| |||
|short_description=p1@C1orf55 | |||
}} |
Revision as of 00:27, 11 January 2014
Short description: | p1@C1orf55 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C1orf55_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000272091, ENST00000366817, ENST00000366818, NM_152608, uc001hpu.3, uc001hpv.2_5end |
EntrezGene: | C1orf55 |
HGNC: | 26643 |
UniProt: | Q6IQ49C9JIQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.20e-36 | 168 |
hematopoietic cell | 3.02e-33 | 177 |
hematopoietic oligopotent progenitor cell | 7.95e-33 | 161 |
hematopoietic multipotent progenitor cell | 7.95e-33 | 161 |
leukocyte | 3.50e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 4.23e-23 | 120 |
myeloid cell | 8.60e-22 | 108 |
common myeloid progenitor | 8.60e-22 | 108 |
nongranular leukocyte | 6.36e-21 | 115 |
classical monocyte | 9.34e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.34e-18 | 42 |
myeloid leukocyte | 1.25e-15 | 72 |
defensive cell | 4.59e-13 | 48 |
phagocyte | 4.59e-13 | 48 |
granulocyte monocyte progenitor cell | 5.54e-13 | 67 |
myeloid lineage restricted progenitor cell | 1.55e-12 | 66 |
macrophage dendritic cell progenitor | 7.61e-11 | 61 |
lymphocyte | 3.36e-10 | 53 |
common lymphoid progenitor | 3.36e-10 | 53 |
monopoietic cell | 6.69e-10 | 59 |
monocyte | 6.69e-10 | 59 |
monoblast | 6.69e-10 | 59 |
promonocyte | 6.69e-10 | 59 |
lymphoid lineage restricted progenitor cell | 7.30e-10 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.87e-16 | 98 |
blood island | 2.87e-16 | 98 |
hemolymphoid system | 8.90e-14 | 108 |
bone element | 1.18e-10 | 82 |
bone marrow | 3.04e-10 | 76 |
immune system | 1.60e-09 | 93 |
skeletal element | 1.88e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.35e-09 | 235 |
disease of cellular proliferation | 1.97e-08 | 239 |