FFCP PHASE1:Hg19::chr10:26727724..26727729,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=17379 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z5R6 | |||
|association_with_transcript=28bp_to_AY152730_5end | |||
|description=CAGE_peak_11_at_APBB1IP_5end | |||
|id=chr10:26727724..26727729,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.16e-54!140;CL:0002087!1.94e-54!119;CL:0002031!7.44e-48!124;CL:0000037!5.90e-47!172;CL:0000566!5.90e-47!172;CL:0002032!6.72e-45!165;CL:0000837!6.72e-45!165;CL:0000988!1.57e-43!182;CL:0002194!4.16e-32!63;CL:0000576!4.16e-32!63;CL:0000040!4.16e-32!63;CL:0000559!4.16e-32!63;CL:0002057!1.63e-31!42;CL:0002009!1.40e-30!65;CL:0000766!2.42e-29!76;CL:0000860!1.86e-28!45;CL:0000839!3.67e-27!70;CL:0000557!1.54e-26!71;CL:0000763!1.23e-23!112;CL:0000049!1.23e-23!112;CL:0000134!1.39e-21!358;CL:0000838!1.57e-20!52;CL:0002320!1.98e-20!365;CL:0000542!6.71e-20!53;CL:0000051!6.71e-20!53;CL:0000219!2.01e-16!390;CL:0000048!2.95e-12!430;CL:0000791!8.22e-12!18;CL:0000789!8.22e-12!18;CL:0002420!8.22e-12!18;CL:0002419!8.22e-12!18;CL:0000790!8.22e-12!18;CL:0000723!1.31e-11!436;CL:0000034!8.84e-11!444;CL:0000084!1.24e-10!25;CL:0000827!1.24e-10!25;CL:0000945!3.69e-10!24;CL:0000826!3.69e-10!24 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.48e-54;33!CL:0002057;2.48e-54;33!CL:0000473;2.56e-42;39!CL:0000234;2.56e-42;39!CL:0000576;8.13e-28;48!CL:0000766;6.74e-16;69!CL:0002087;2.74e-10;104!CL:0000738;7.54e-09;136!CL:0000763;9.34e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.87e-50,42;CL:0002057,4.87e-50,42;CL:0000473,2.52e-47,48;CL:0000234,2.52e-47,48;CL:0002194,8.95e-37,59;CL:0000576,8.95e-37,59;CL:0000040,8.95e-37,59;CL:0000559,8.95e-37,59;CL:0002009,2.06e-35,61;CL:0002087,2.17e-32,115;CL:0000839,2.30e-32,66;CL:0000766,4.80e-32,72;CL:0000557,8.25e-32,67;CL:0002031,9.09e-31,120;CL:0000738,1.98e-30,136;CL:0000037,2.60e-23,168;CL:0002032,6.61e-23,161;CL:0000837,6.61e-23,161;CL:0000988,9.02e-22,177;CL:0000763,1.30e-19,108;CL:0000049,1.30e-19,108;CL:0000134,2.27e-07,354;CL:0002320,4.29e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.16e-37;42!CL:0000049;1.73e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.20e-31!102;UBERON:0003061!1.20e-31!102;UBERON:0002193!2.43e-30!112;UBERON:0002371!5.44e-24!80;UBERON:0001474!4.07e-21!86;UBERON:0002384!1.08e-20!375;UBERON:0002405!6.21e-20!115;UBERON:0004765!3.65e-17!101;UBERON:0001434!3.65e-17!101;UBERON:0003081!3.55e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.42e-29,98;UBERON:0003061,6.42e-29,98;UBERON:0002371,1.85e-27,76;UBERON:0002193,1.07e-25,108;UBERON:0001474,4.39e-25,82;UBERON:0002405,1.26e-23,93;UBERON:0004765,2.10e-22,90;UBERON:0001434,1.18e-19,100;UBERON:0003081,6.98e-11,203;UBERON:0002204,9.95e-10,167 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.246301768349837,0.550975469195755,0.786728553697808,1.15148819429164,0.464448369948228,0,0,0,0.46480320348181,0,0,0.553995408531877,1.00272223735071,0,0.671746422719773,0.647787332037959,0.515151135268373,1.89017710413434,1.51150377475524,2.42584061187816,1.16214518452842,1.23350366406548,2.16794459626573,0.863077176966451,1.7931249457037,1.41889337933151,1.03423704220986,0,0,2.07066573496865,1.63743690034707,0.674170453335254,1.53041946185451,0.962787081228281,2.55734850319616,2.30895910130701,1.59570926097305,2.13112375266347,1.16083695451434,0,0,3.51748131359441,1.5644487552606,1.08594422352558,0.605399502633369,1.10483290796269,0.632924774881769,0.211255286311942,0.425208599930087,0,0.44931452458598,0.600707571366025,0.16072558669708,0.570025487482497,0.59675003159727,0.730656615058536,0,0.546138611262131,1.77901850772711,0.426730222566507,0.400395987036012,1.72425731986345,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.786839080455332,0.393010762749165,0.411202997999018,0.167186495390678,0.977766799900771,0,0,1.22551502573691,0.883817722424512,0.886135578334485,1.62482318259009,0.25618263945135,0.130059347559878,0.328875809207352,0.276350017785848,0.869409257205157,0.889719378972363,1.33770414044857,0,0.453237370790265,0.383220493601921,0.34362744548263,0.506039384039006,0.95569624297229,1.30216690771284,0,0.602300476311091,0.639933055772092,0,1.18388626022008,0,0.80642697289893,1.06976078313403,0.579297615531196,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0.696518949197069,0.664789802594326,0.238490624305342,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0.276149695926898,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0.224170287987055,0,1.07813787429759,0.513372145118994,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.415941723061614,0.178428988797162,0.473107245101804,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.640365346820666,0,0,0,0,0.460385919864187,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0,2.27858874869665,0.238231775457789,0.822724546172388,0,1.62009431171434,0.79312517629427,0,0,0,0,0.865615277858669,0.142283686696828,0.159426272728822,0.199579371432817,0.383010740264733,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0.369254416383208,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,1.02193298195737,0,0.166211681900156,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.992332043623902,0,1.09613338542806,0,0.544017803369474,0.2506898940227,0.612691153526923,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0,0,0.889811221596536,0.228840068396924,0.302461847526478,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.398594520940089,0.163565394255844,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581300188524055,1.11734485732544,1.6819779387092,0,0,0,0,0.134704106029175,0.215166616178029,0,0,0.213454691755431,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p11@APBB1IP | |||
}} |
Revision as of 02:15, 11 January 2014
Short description: | p11@APBB1IP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_APBB1IP_5end |
Coexpression cluster: | NA |
Association with transcript: | 28bp_to_AY152730_5end |
EntrezGene: | APBB1IP |
HGNC: | 17379 |
UniProt: | Q7Z5R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.87e-50 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.87e-50 | 42 |
defensive cell | 2.52e-47 | 48 |
phagocyte | 2.52e-47 | 48 |
monopoietic cell | 8.95e-37 | 59 |
monocyte | 8.95e-37 | 59 |
monoblast | 8.95e-37 | 59 |
promonocyte | 8.95e-37 | 59 |
macrophage dendritic cell progenitor | 2.06e-35 | 61 |
nongranular leukocyte | 2.17e-32 | 115 |
myeloid lineage restricted progenitor cell | 2.30e-32 | 66 |
myeloid leukocyte | 4.80e-32 | 72 |
granulocyte monocyte progenitor cell | 8.25e-32 | 67 |
hematopoietic lineage restricted progenitor cell | 9.09e-31 | 120 |
leukocyte | 1.98e-30 | 136 |
hematopoietic stem cell | 2.60e-23 | 168 |
hematopoietic oligopotent progenitor cell | 6.61e-23 | 161 |
hematopoietic multipotent progenitor cell | 6.61e-23 | 161 |
hematopoietic cell | 9.02e-22 | 177 |
myeloid cell | 1.30e-19 | 108 |
common myeloid progenitor | 1.30e-19 | 108 |
mesenchymal cell | 2.27e-07 | 354 |
connective tissue cell | 4.29e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.42e-29 | 98 |
blood island | 6.42e-29 | 98 |
bone marrow | 1.85e-27 | 76 |
hemolymphoid system | 1.07e-25 | 108 |
bone element | 4.39e-25 | 82 |
immune system | 1.26e-23 | 93 |
skeletal element | 2.10e-22 | 90 |
skeletal system | 1.18e-19 | 100 |
lateral plate mesoderm | 6.98e-11 | 203 |
musculoskeletal system | 9.95e-10 | 167 |