FFCP PHASE1:Hg19::chr11:63273633..63273644,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85329 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15788 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=59bp_to_ENST00000394618_5end | |||
|coexpression_cluster_id=C220 | |||
|description=CAGE_peak_3_at_LGALS12_5end | |||
|id=chr11:63273633..63273644,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.27e-18!112;CL:0000049!1.27e-18!112;CL:0000136!2.61e-17!15;CL:0000037!2.12e-10!172;CL:0000566!2.12e-10!172;CL:0000988!3.62e-09!182;CL:0002032!7.98e-09!165;CL:0000837!7.98e-09!165;CL:0002057!3.96e-08!42;CL:0000766!8.27e-08!76;CL:0000860!2.67e-07!45;CL:0002521!4.87e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.32e-41;13!CL:0002521;1.64e-14;3!CL:0002615;5.61e-14;3!CL:0000094;7.70e-14;8!CL:0000771;4.01e-10;2!CL:0000081;5.47e-10;11!CL:0000775;5.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.16e-35,15;CL:0002521,1.17e-14,3;CL:0000094,6.13e-14,8;CL:0002615,7.66e-14,3;CL:0000771,3.83e-10,2;CL:0000081,4.65e-10,11;CL:0000763,5.14e-10,108;CL:0000049,5.14e-10,108;CL:0000775,5.02e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.62e-16!31;DOID:1240!5.52e-12!39;DOID:2531!5.96e-08!51;DOID:0060083!5.96e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.58e-17;31!DOID:1240;6.50e-11;39!DOID:2531;1.77e-07;51!DOID:0060083;1.77e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.89e-18,31;DOID:1240,1.29e-13,39;DOID:2531,7.79e-10,51;DOID:0060083,7.79e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.58e-12!15;UBERON:0000179!1.58e-12!15;UBERON:0000463!1.58e-12!15;UBERON:0002390!5.33e-11!102;UBERON:0003061!5.33e-11!102;UBERON:0002193!3.22e-09!112;UBERON:0002190!4.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.64e-14;3!UBERON:0000178;2.41e-13;15!UBERON:0000179;2.41e-13;15!UBERON:0000463;2.41e-13;15!UBERON:0002072;6.96e-09;5!UBERON:0003688;3.30e-07;6!UBERON:0002358;3.30e-07;6!UBERON:0003684;3.30e-07;6!UBERON:0001178;3.30e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.17e-14,3;UBERON:0000178,2.32e-13,15;UBERON:0000179,2.32e-13,15;UBERON:0000463,2.32e-13,15;UBERON:0002072,5.71e-09,5;UBERON:0003688,3.83e-07,6;UBERON:0002358,3.83e-07,6;UBERON:0003684,3.83e-07,6;UBERON:0001178,3.83e-07,6 | |||
|phase1_expression=0.363356758541113,9.63452357509424,2.96004248601539,1.0007329835313,6.70441641640932,0,55.7259731970283,1.89515962028049,16.7158802047897,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0,0,0,0,0,0,1.57345710739562,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0.290796477559129,0,0,0,0.411167888021826,0.929119112685311,1.1507695692886,0,0,1.03423704220986,0.645484683583826,0,0.564727018627814,0,0,0,0.962787081228281,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0.211255286311942,0,0.209658645508376,0.561643155732475,0,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49404214368309,2.99161459204025,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0.206768026122887,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0.165018999841176,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,1.52927441428475,1.13929437434833,2.62054953003568,2.46817363851717,1.94541993357815,0.540031437238115,0,0,0,0,0,0,0,0,1.39705560002972,0.957526850661834,0,4.22008522356922,0,0.684704037099577,4.85707676896372,0,0,1.1241165257259,1.21079824314629,0,10.6486656874287,0,0,0.166849141711909,7.62013572067957,1.39203086947621,0,0,1.6653598399891,1.4098700508785,0,2.78365540616599,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,2.04628948090749,0,2.3948309234694,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72678282034527,0.498635045700469,0,0.19606253431774,0,0,0.317873157960757,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.916641696046735,0.717873024576814,0.199679000498991,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0.410462603746695,0,0.113312091520126,0,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,0,0,24.4808011516263,9.02483618481721,9.19036730290385,20.3281031040079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0,5.01451129562462,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0.385375350578757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596748666348824,0,0,0,0,0,0,0,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,2.61655931668334,0 | |||
|short_description=p3@LGALS12 | |||
}} |
Revision as of 08:16, 11 January 2014
Short description: | p3@LGALS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LGALS12_5end |
Coexpression cluster: | C220_Adipocyte_mature_left_breast_skin_liver_adipose |
Association with transcript: | 59bp_to_ENST00000394618_5end |
EntrezGene: | LGALS12 |
HGNC: | 15788 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.16e-35 | 15 |
subcutaneous fat cell | 1.17e-14 | 3 |
granulocyte | 6.13e-14 | 8 |
adipocyte of omentum tissue | 7.66e-14 | 3 |
eosinophil | 3.83e-10 | 2 |
blood cell | 4.65e-10 | 11 |
myeloid cell | 5.14e-10 | 108 |
common myeloid progenitor | 5.14e-10 | 108 |
neutrophil | 5.02e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.17e-14 | 3 |
blood | 2.32e-13 | 15 |
haemolymphatic fluid | 2.32e-13 | 15 |
organism substance | 2.32e-13 | 15 |
hypodermis | 5.71e-09 | 5 |
omentum | 3.83e-07 | 6 |
peritoneum | 3.83e-07 | 6 |
abdominal cavity | 3.83e-07 | 6 |
visceral peritoneum | 3.83e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.89e-18 | 31 |
leukemia | 1.29e-13 | 39 |
hematologic cancer | 7.79e-10 | 51 |
immune system cancer | 7.79e-10 | 51 |