FFCP PHASE1:Hg19::chr11:74204883..74204894,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10714 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20932 | |||
|TSSclassifier=strong | |||
|UniProt=E9PM91 | |||
|association_with_transcript=-1bp_to_ENST00000528481_5end | |||
|description=CAGE_peak_4_at_POLD3_5end | |||
|id=chr11:74204883..74204894,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.49e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002553;3.56e-19;1!CL:0000082;3.78e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.71e-19,1;CL:0000082,3.73e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0006242;3.56e-19;1 | |||
|ontology_enrichment_disease=DOID:305!2.54e-13!106;DOID:0050687!4.00e-12!143;DOID:1749!1.24e-09!14;DOID:0050615!2.62e-09!16;DOID:162!2.12e-08!235;DOID:14566!5.54e-08!239;DOID:1324!9.09e-08!15 | |||
|ontology_enrichment_disease_v019=DOID:0050619;9.82e-20;1!DOID:1357;9.82e-20;1!DOID:5409;5.64e-19;4!DOID:0050615;2.08e-18;16!DOID:1324;1.99e-11;15!DOID:1325;2.83e-11;7!DOID:3904;2.83e-11;7!DOID:3493;1.50e-10;2!DOID:4074;2.85e-10;2!DOID:4905;2.85e-10;2!DOID:3498;2.85e-10;2!DOID:3905;5.64e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.95e-20,1;DOID:1357,8.95e-20,1;DOID:5409,6.18e-19,4;DOID:0050615,1.99e-18,16;DOID:1324,1.96e-11,15;DOID:1325,2.98e-11,7;DOID:3904,2.98e-11,7;DOID:3493,1.57e-10,2;DOID:4074,2.99e-10,2;DOID:4905,2.99e-10,2;DOID:3498,2.99e-10,2;DOID:3905,5.87e-09,9;DOID:305,5.03e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0000476!2.49e-07!3;UBERON:0000920!2.49e-07!3;UBERON:0003124!2.71e-07!7;UBERON:0000344!3.02e-07!12;UBERON:0004119!4.14e-07!169;UBERON:0000925!4.14e-07!169;UBERON:0006595!4.14e-07!169;UBERON:0004921!7.38e-07!129;UBERON:0004185!7.38e-07!129;UBERON:0001007!9.92e-07!155;UBERON:0001555!9.92e-07!155;UBERON:0007026!9.92e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;9.82e-20;1!UBERON:0001825;9.82e-20;1!UBERON:0002075;1.42e-09;18!UBERON:0004802;3.78e-09;19!UBERON:0000115;3.78e-09;19!UBERON:0001264;4.18e-08;10!UBERON:0002048;5.59e-08;22!UBERON:0004807;5.59e-08;22!UBERON:0000117;5.59e-08;22!UBERON:0000171;5.59e-08;22!UBERON:0000170;5.59e-08;22!UBERON:0002110;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,8.95e-20,1;UBERON:0001825,8.95e-20,1;UBERON:0002075,1.32e-09,18;UBERON:0004802,3.73e-09,19;UBERON:0000115,3.73e-09,19;UBERON:0001264,4.19e-08,10;UBERON:0002048,5.52e-08,22;UBERON:0000117,5.52e-08,22;UBERON:0000171,5.52e-08,22;UBERON:0000170,5.52e-08,22;UBERON:0005597,5.52e-08,22;UBERON:0000118,5.52e-08,22;UBERON:0002110,2.47e-07,3;UBERON:0006242,2.47e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49137296979728,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0.537063524026827,0,0,0,0,0,0.185536196323703,0,0,0.174919999992391,0,0.1137934482855,0.254253650292766,0.236387681767936,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0,0.325942115766024,0.31900115973192,0.457987967009312,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0.619202951523374,0.611030144933625,0,0,0,0,0,0,0.182454789215666,1.36965233252463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0.174118413160805,0,0,0.0967563312890851,0.0730893170861856,0,0.193978032976839,0,0.451961481561065,0.137041924646751,0,0,0,0,1.70762395791482,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643012593860077,0.412618309791701,0,0.2249738915515,0,0,0.335434687599266,0.551639951094387,0.262272940674991,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,7.69565071626148,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,2.25739752552359,0.11796972334774,0,0.231051332300676,0,0,0,0,0,1.56302802246618,0,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0.336283722218824,0,0.455324382702595,0.0887023701626388,0,0,0,0,0.118193840883968,0,0.313972371402056,0,0,0,0.215927591218621,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0,0,0.223710863595585,0.098150233615243,7.68082927388297,0,0,0,0,0.467878926924211,0,0,1.24240690242856,0,2.71733118420012,0.617393264863557,0.655678681511872,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0.352894871715692,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0.459474497674225,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0,0,0,0.0673520530145875,0.502055437748735,0.332660356546013,0.244209805832924,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p4@POLD3 | |||
}} |
Revision as of 09:24, 11 January 2014
Short description: | p4@POLD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POLD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000528481_5end |
EntrezGene: | POLD3 |
HGNC: | 20932 |
UniProt: | E9PM91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.71e-19 | 1 |
epithelial cell of lung | 3.73e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 8.95e-20 | 1 |
paranasal sinus | 8.95e-20 | 1 |
viscus | 1.32e-09 | 18 |
respiratory tract epithelium | 3.73e-09 | 19 |
lung epithelium | 3.73e-09 | 19 |
pancreas | 4.19e-08 | 10 |
lung | 5.52e-08 | 22 |
respiratory tube | 5.52e-08 | 22 |
respiration organ | 5.52e-08 | 22 |
pair of lungs | 5.52e-08 | 22 |
lung primordium | 5.52e-08 | 22 |
lung bud | 5.52e-08 | 22 |
gallbladder | 2.47e-07 | 3 |
gall bladder primordium | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.95e-20 | 1 |
maxillary sinus cancer | 8.95e-20 | 1 |
lung small cell carcinoma | 6.18e-19 | 4 |
respiratory system cancer | 1.99e-18 | 16 |
lung cancer | 1.96e-11 | 15 |
bronchus cancer | 2.98e-11 | 7 |
bronchogenic carcinoma | 2.98e-11 | 7 |
signet ring cell adenocarcinoma | 1.57e-10 | 2 |
pancreas adenocarcinoma | 2.99e-10 | 2 |
pancreatic carcinoma | 2.99e-10 | 2 |
pancreatic ductal adenocarcinoma | 2.99e-10 | 2 |
lung carcinoma | 5.87e-09 | 9 |
carcinoma | 5.03e-08 | 106 |