FFCP PHASE1:Hg19::chr11:84431828..84431834,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENST00000534275_5end | |||
|description=CAGE_peak_2_at_ENST00000534275_5end | |||
|id=chr11:84431828..84431834,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.86e-18;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;9.86e-18;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.93e-30!115;UBERON:0001049!6.48e-28!57;UBERON:0005068!6.48e-28!57;UBERON:0006241!6.48e-28!57;UBERON:0007135!6.48e-28!57;UBERON:0002616!1.77e-24!59;UBERON:0001893!2.97e-24!34;UBERON:0001017!6.87e-24!82;UBERON:0000955!2.11e-23!69;UBERON:0006238!2.11e-23!69;UBERON:0001869!3.73e-23!32;UBERON:0000073!7.95e-23!94;UBERON:0001016!7.95e-23!94;UBERON:0005743!2.01e-22!86;UBERON:0002791!2.51e-22!33;UBERON:0002780!1.18e-21!41;UBERON:0001890!1.18e-21!41;UBERON:0006240!1.18e-21!41;UBERON:0002020!2.10e-21!34;UBERON:0003528!2.10e-21!34;UBERON:0003080!5.00e-21!42;UBERON:0003075!5.97e-21!86;UBERON:0007284!5.97e-21!86;UBERON:0002346!1.12e-19!90;UBERON:0001950!2.90e-19!20;UBERON:0002619!2.56e-17!22;UBERON:0000153!7.91e-16!129;UBERON:0007811!7.91e-16!129;UBERON:0000956!5.78e-15!25;UBERON:0000203!5.78e-15!25;UBERON:0000033!2.25e-14!123;UBERON:0004121!9.39e-14!169;UBERON:0000924!3.17e-13!173;UBERON:0006601!3.17e-13!173;UBERON:0003056!5.52e-13!61;UBERON:0005383!8.73e-10!3;UBERON:0005382!8.73e-10!3;UBERON:0001871!1.70e-08!7;UBERON:0002420!2.45e-08!9;UBERON:0007245!2.45e-08!9;UBERON:0010009!2.45e-08!9;UBERON:0010011!2.45e-08!9;UBERON:0000454!2.45e-08!9;UBERON:0003076!5.01e-08!15;UBERON:0003057!5.01e-08!15;UBERON:0002308!5.25e-08!9;UBERON:0000125!5.25e-08!9;UBERON:0004733!1.47e-07!12;UBERON:0002028!1.47e-07!12;UBERON:0007277!1.47e-07!12;UBERON:0000369!2.03e-07!4;UBERON:0002435!2.03e-07!4;UBERON:0000204!2.03e-07!4;UBERON:0010082!2.03e-07!4;UBERON:0000200!2.40e-07!6;UBERON:0009663!3.81e-07!7;UBERON:0001873!4.10e-07!2;UBERON:0010122!4.10e-07!2;UBERON:0004732!6.32e-07!13;UBERON:0002133!6.37e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.40e-66;2!UBERON:0005058;2.40e-66;2!UBERON:0009113;2.40e-66;2!UBERON:0004177;2.54e-27;5!UBERON:0005057;2.54e-27;5!UBERON:0001873;9.86e-18;2!UBERON:0005383;2.74e-12;3!UBERON:0005382;2.74e-12;3!UBERON:0000369;1.50e-09;4!UBERON:0002435;1.50e-09;4!UBERON:0000204;1.50e-09;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.36e-34,4;UBERON:0005058,8.36e-34,4;UBERON:0009113,8.36e-34,4;UBERON:0003295,8.36e-34,4;UBERON:0005562,8.36e-34,4;UBERON:0003351,6.07e-23,6;UBERON:0004177,7.84e-20,7;UBERON:0005057,7.84e-20,7;UBERON:0001873,9.07e-18,2;UBERON:0010122,9.07e-18,2;UBERON:0000974,3.25e-14,10;UBERON:0003408,3.25e-14,10;UBERON:0001042,3.25e-14,10;UBERON:0009145,3.25e-14,10;UBERON:0006562,5.10e-13,11;UBERON:0009722,5.10e-13,11;UBERON:0007690,5.10e-13,11;UBERON:0005383,2.59e-12,3;UBERON:0005382,2.59e-12,3;UBERON:0000369,1.44e-09,4;UBERON:0002435,1.44e-09,4;UBERON:0000204,1.44e-09,4;UBERON:0010082,1.44e-09,4;UBERON:0008814,2.42e-08,18;UBERON:0001557,5.94e-08,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.427296284509893,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,4.43363357068786,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0,0,0,1.77148277162768,0.361789315876224,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.337005664903385,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364497339948148,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0.205116364240755,0.504143392443436,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.206686796501184,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0.150962843566674,0,0,0.470317296361523,0,0,0,0,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,3.55239004098034,1.30356900021302,0,0,0,0.217716747896961,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p2@ENST00000534275 | |||
}} |
Revision as of 09:41, 11 January 2014
Short description: | p2@ENST00000534275 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000534275_5end |
Coexpression cluster: | NA |
Association with transcript: | -34bp_to_ENST00000534275_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.36e-34 | 4 |
hemolymphoid system gland | 8.36e-34 | 4 |
thymic region | 8.36e-34 | 4 |
pharyngeal gland | 8.36e-34 | 4 |
thymus primordium | 8.36e-34 | 4 |
pharyngeal epithelium | 6.07e-23 | 6 |
hemopoietic organ | 7.84e-20 | 7 |
immune organ | 7.84e-20 | 7 |
caudate nucleus | 9.07e-18 | 2 |
future caudate nucleus | 9.07e-18 | 2 |
neck | 3.25e-14 | 10 |
gland of gut | 3.25e-14 | 10 |
chordate pharynx | 3.25e-14 | 10 |
pharyngeal region of foregut | 3.25e-14 | 10 |
pharynx | 5.10e-13 | 11 |
entire pharyngeal arch endoderm | 5.10e-13 | 11 |
early pharyngeal endoderm | 5.10e-13 | 11 |
caudate-putamen | 2.59e-12 | 3 |
dorsal striatum | 2.59e-12 | 3 |
corpus striatum | 1.44e-09 | 4 |
striatum | 1.44e-09 | 4 |
ventral part of telencephalon | 1.44e-09 | 4 |
future corpus striatum | 1.44e-09 | 4 |
pharyngeal arch system | 2.42e-08 | 18 |
upper respiratory tract | 5.94e-08 | 19 |