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FFCP PHASE1:Hg19::chr12:9066419..9066470,+: Difference between revisions

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{{FFCP|DPIdataset=robustDPI|EntrezGene=1911|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3182|TSSclassifier=S|UniProt=F5H6F5|association_with_transcript=-21bp_to_ENST00000538657_5end|coexpression_cluster_id=C49|description=CAGE_peak_3_at_PHC1_5end|id=chr12:9066419..9066470,+|ontology_enrichment_celltype=CL:0002322!1.55e-14!5;CL:0000039!9.65e-10!7;CL:0000586!9.65e-10!7|ontology_enrichment_celltype_v019=CL:0002322;6.42e-56;5!CL:0000039;1.45e-25;7!CL:0000586;1.45e-25;7!CL:0002321;1.09e-18;15!CL:0000540;1.09e-17;6!CL:0000404;1.09e-17;6!CL:0000148;1.16e-10;10!CL:0000147;9.24e-08;14|ontology_enrichment_celltype_v019_2=CL:0002322,6.43e-56,5;CL:0000039,1.45e-25,7;CL:0000586,1.45e-25,7;CL:0000540,1.09e-17,6;CL:0000031,1.09e-17,6;CL:0000404,1.09e-17,6;CL:0000047,2.03e-13,8;CL:0000148,1.20e-10,10;CL:0000541,1.20e-10,10;CL:0000147,9.46e-08,14|ontology_enrichment_development_v019=UBERON:0009117;1.86e-27;10!UBERON:0005564;1.86e-27;10!CL:0000031;1.09e-17;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3095;1.35e-17;22!DOID:2994;1.35e-17;22|ontology_enrichment_disease_v019_2=DOID:3095,1.39e-17,22;DOID:2994,1.39e-17,22|ontology_enrichment_uberon=UBERON:0003135!1.89e-08!11;UBERON:0000991!8.63e-07!21;UBERON:0009196!8.63e-07!21;UBERON:0009117!8.63e-07!21;UBERON:0005564!8.63e-07!21;UBERON:0003296!9.32e-07!4;UBERON:0010133!9.32e-07!4|ontology_enrichment_uberon_v019=UBERON:0000007;1.26e-22;2!UBERON:0000473;2.04e-22;8!UBERON:0003135;2.16e-16;11!UBERON:0000991;4.48e-13;21!UBERON:0003296;8.17e-12;4!UBERON:0010133;8.17e-12;4!UBERON:0000922;4.88e-11;49!UBERON:0003101;2.62e-08;22!UBERON:0000079;2.62e-08;22!UBERON:0001894;3.97e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.19e-22,2;UBERON:0000473,2.04e-22,8;UBERON:0003135,2.16e-16,11;UBERON:0000991,4.53e-13,21;UBERON:0009196,4.53e-13,21;UBERON:0009117,4.53e-13,21;UBERON:0005564,4.53e-13,21;UBERON:0004176,1.79e-12,22;UBERON:0003296,7.95e-12,4;UBERON:0010133,7.95e-12,4;UBERON:0003101,2.62e-08,22;UBERON:0000079,2.62e-08,22;UBERON:0001894,3.91e-07,7;UBERON:0006222,3.91e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0.485168122375632,0.464858073811369,0,0.309706370895104,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,34.8844799530643,26.3734238959756,26.0274432027721,11.8173602717522,25.4844059384385,10.2193660541232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,25.7205037544031,43.1873830915314,34.4815480564224,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,2.42786241694653,4.78090601837725,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14482922219634,1.20192129160065,0,23.6614085001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{{FFCP
|DHSsupport=supported
|DPIdataset=robust
|EntrezGene=1911
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=3182
|TSSclassifier=strong
|UniProt=F5H6F5
|association_with_transcript=-21bp_to_ENST00000538657_5end
|coexpression_cluster_id=C49
|description=CAGE_peak_3_at_PHC1_5end
|id=chr12:9066419..9066470,+
|ontology_enrichment_celltype=CL:0002322!1.55e-14!5;CL:0000039!9.65e-10!7;CL:0000586!9.65e-10!7
|ontology_enrichment_celltype_v019=CL:0002322;6.42e-56;5!CL:0000039;1.45e-25;7!CL:0000586;1.45e-25;7!CL:0002321;1.09e-18;15!CL:0000540;1.09e-17;6!CL:0000404;1.09e-17;6!CL:0000148;1.16e-10;10!CL:0000147;9.24e-08;14
|ontology_enrichment_celltype_v019_2=CL:0002322,6.43e-56,5;CL:0000039,1.45e-25,7;CL:0000586,1.45e-25,7;CL:0000540,1.09e-17,6;CL:0000031,1.09e-17,6;CL:0000404,1.09e-17,6;CL:0000047,2.03e-13,8;CL:0000148,1.20e-10,10;CL:0000541,1.20e-10,10;CL:0000147,9.46e-08,14
|ontology_enrichment_development_v019=UBERON:0009117;1.86e-27;10!UBERON:0005564;1.86e-27;10!CL:0000031;1.09e-17;6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:3095;1.35e-17;22!DOID:2994;1.35e-17;22
|ontology_enrichment_disease_v019_2=DOID:3095,1.39e-17,22;DOID:2994,1.39e-17,22
|ontology_enrichment_uberon=UBERON:0003135!1.89e-08!11;UBERON:0000991!8.63e-07!21;UBERON:0009196!8.63e-07!21;UBERON:0009117!8.63e-07!21;UBERON:0005564!8.63e-07!21;UBERON:0003296!9.32e-07!4;UBERON:0010133!9.32e-07!4
|ontology_enrichment_uberon_v019=UBERON:0000007;1.26e-22;2!UBERON:0000473;2.04e-22;8!UBERON:0003135;2.16e-16;11!UBERON:0000991;4.48e-13;21!UBERON:0003296;8.17e-12;4!UBERON:0010133;8.17e-12;4!UBERON:0000922;4.88e-11;49!UBERON:0003101;2.62e-08;22!UBERON:0000079;2.62e-08;22!UBERON:0001894;3.97e-07;7
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.19e-22,2;UBERON:0000473,2.04e-22,8;UBERON:0003135,2.16e-16,11;UBERON:0000991,4.53e-13,21;UBERON:0009196,4.53e-13,21;UBERON:0009117,4.53e-13,21;UBERON:0005564,4.53e-13,21;UBERON:0004176,1.79e-12,22;UBERON:0003296,7.95e-12,4;UBERON:0010133,7.95e-12,4;UBERON:0003101,2.62e-08,22;UBERON:0000079,2.62e-08,22;UBERON:0001894,3.91e-07,7;UBERON:0006222,3.91e-07,7
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0.485168122375632,0.464858073811369,0,0.309706370895104,0,0,0.236482229888585,0,0,1.35426486594342,0,0,0.449446968890169,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,34.8844799530643,26.3734238959756,26.0274432027721,11.8173602717522,25.4844059384385,10.2193660541232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,25.7205037544031,43.1873830915314,34.4815480564224,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0.336283722218824,2.42786241694653,4.78090601837725,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14482922219634,1.20192129160065,0,23.6614085001398,16.0330443159336,15.5302380213888,16.2959900540044,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0.217716747896961,0,0,0.143444410785353,0,0,0,0,0.0898252021065869,0,0,0.406896178315738,0,0.201273793591026,0
|short_description=p3@PHC1
}}

Revision as of 11:59, 11 January 2014

Short description:p3@PHC1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_PHC1_5end
Coexpression cluster:C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma
Association with transcript: -21bp_to_ENST00000538657_5end
EntrezGene:PHC1
HGNC: 3182
UniProt: F5H6F5
Genome view:ZENBU


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CAGE Expression




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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data