FFCP PHASE1:Hg19::chr12:46384249..46384256,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9169 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10784 | |||
|TSSclassifier=strong | |||
|UniProt=F8W6K1,Q99590 | |||
|association_with_transcript=91bp_to_ENST00000266589,ENST00000369367_5end | |||
|description=CAGE_peak_6_at_SCAF11_5end | |||
|id=chr12:46384249..46384256,- | |||
|ontology_enrichment_celltype=CL:0000860!3.05e-13!45;CL:0002057!2.21e-12!42;CL:0000766!9.22e-12!76;CL:0000763!1.60e-11!112;CL:0000049!1.60e-11!112;CL:0000557!1.75e-11!71;CL:0000839!9.80e-11!70;CL:0002009!1.17e-10!65;CL:0002194!7.41e-10!63;CL:0000576!7.41e-10!63;CL:0000040!7.41e-10!63;CL:0000559!7.41e-10!63;CL:0000037!8.33e-08!172;CL:0000566!8.33e-08!172;CL:0002032!1.45e-07!165;CL:0000837!1.45e-07!165;CL:0000738!1.85e-07!140;CL:0000988!6.29e-07!182;CL:0002031!9.70e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.73e-11;33!CL:0002057;1.73e-11;33!CL:0000473;2.64e-07;39!CL:0000234;2.64e-07;39!CL:0002322;3.59e-07;5!CL:0000576;6.03e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.67e-11,42;CL:0002057,2.67e-11,42;CL:0000766,8.42e-10,72;CL:0000473,4.23e-09,48;CL:0000234,4.23e-09,48;CL:0000557,4.27e-09,67;CL:0000763,5.76e-08,108;CL:0000049,5.76e-08,108;CL:0002009,5.79e-08,61;CL:0000839,1.13e-07,66;CL:0002322,4.84e-07,5;CL:0002194,8.41e-07,59;CL:0000576,8.41e-07,59;CL:0000040,8.41e-07,59;CL:0000559,8.41e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.08e-08;42 | |||
|ontology_enrichment_disease=DOID:162!9.03e-11!235;DOID:14566!1.17e-10!239;DOID:0050687!2.11e-10!143;DOID:305!1.22e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!1.18e-09!86;UBERON:0002371!1.45e-09!80;UBERON:0002390!4.33e-07!102;UBERON:0003061!4.33e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.36e-08,76;UBERON:0001474,1.26e-07,82;UBERON:0002390,2.89e-07,98;UBERON:0003061,2.89e-07,98 | |||
|phase1_expression=0.363356758541113,0.642301571672949,0.422863212287913,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0.273748850145768,1.25542639594803,0.305653622991805,0.738905305049512,0.393553906568396,1.96682138424452,1.53531759238885,0.154816123316076,0.919421224478927,0,0,0.774672005803016,0.995184627411951,0.293600439334847,0,1.40381113229099,0.651032612147555,0.671746422719773,0.32389366601898,0.257575567634187,1.30858414901608,1.88937971844405,1.4555043671269,0.697287110717054,1.6446715520873,0.929119112685311,1.43846196161075,1.5369642391746,2.36482229888585,1.03423704220986,0.645484683583826,1.35426486594342,1.69418105588344,1.63743690034707,0.674170453335254,0.918251677112708,0.641858054152187,2.55734850319616,0.329851300186716,1.59570926097305,0.426224750532694,1.45104619314292,1.70215567407342,0.622822248995575,2.00998932205395,2.08593167368081,1.52032191293582,1.81619850790011,0.368277635987565,1.89877432464531,1.26753171787165,0.637812899895131,0.628975936525128,0.786300418025466,0.750884464207532,0.48217676009124,0.570025487482497,0.59675003159727,0.547992461293902,0,0.546138611262131,0,0.853460445133014,0,1.72425731986345,0,0.954053754535364,1.70763890732835,0,0.764546456250458,1.32171328579026,1.68152568894461,0.526768169550154,0,0.786021525498329,0.411202997999018,0.668745981562712,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0.552700035571697,0.579606171470105,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0,0,0.318565414324097,0.651083453856419,0,0,0.127986611154418,0,0,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0,0.383587685530591,0.361439152384566,0,0.289693037921647,0,0,0.283604451492204,0,0.087834785693126,0.654895377488563,0,0,0.324547393654683,0.348259474598534,0.26591592103773,0.953962497221368,1.71598473234038,1.11437250398869,0,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0,0.516833518338658,0,0.33472061276467,0,0,0,0,0,0.446498641420399,0.898117490504679,0.450445921933289,0,0,0.183201743930407,1.31780417436063,0,0,0.993943903390637,0.506522046658319,0.264818361626438,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0,0.576175924479999,0.937285727335186,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.140450806702248,0.408308342509787,0.245668634623536,0.413303124703062,0,0,0,0,0.336672227908132,0.125118519871964,0,0.438977620880838,0,0,0.226864366320042,0.358779271377724,0.427114777637135,0.423863802319124,0.600182192168805,0.721367704669072,1.54584324027377,0.558350568994769,1.0126579934476,0.779496041289589,1.00973509697646,0,0.161646056818812,1.06502877754984,0.10075209822764,0.169560592310488,0.193260853163297,0.818238361772504,0.573609190778008,1.21973706129595,2.25300606146525,1.97529702878181,1.34759371519982,1.00928340350251,1.45990943630332,0,0,0,0,0,0.828147600278907,0.674338760312407,1.20505514941741,0.441175890929576,0.435758888184812,0,0.808987848960987,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0,0.983907508344908,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0.570762456703795,0,0,0.246217006087397,0.936017060556951,0.445893486866185,0,0.335964256397719,0,0.447792613514241,0.871901815541886,0,1.97065295158377,0.44024217006613,1.03664057770386,1.8735593944205,0.75745460055828,0.317489471460845,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0.36669142910475,0.387815147273333,0,0,0.26593811658487,1.04007436911366,0,0,0.266422179016099,0.714889968290738,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,1.42636905040718,0.434343920002738,0.61642896765115,0.179060963239896,0.224170287987055,0.591092280605782,0,0.256686072559497,1.01637849688985,2.60279707715243,0,0.670065061337395,1.27587750330633,0,5.9832291840805,0.828831026872071,0.12269149171914,0,0,0.415941723061614,0.356857977594324,0.630809660135739,0.35142424497814,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0.206768026122887,0.431428401637234,0.853820462427555,0,1.66435439510497,0.30239029332968,0.248107807818777,0.920771839728375,0.841980283299221,0.896974044789907,2.04682899626681,0.482561763430822,0,0.154209693802656,0.177561725313127,0.574890092096664,0,0.116210378459959,1.0877350463246,0.200506470303285,0.0920809889358963,0.34444334449382,0.364182336013434,0,0,0.616122696835318,0,0,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0.256450125116389,0.328014645699706,0.976135183992909,0.515205058238611,0.824125183365091,0.990113999047056,0,0,0,0,0.154048617114644,0.307007349452259,0.137836572484531,0.322260734604821,0,0.255679882248303,0.534192213880424,0.661139661443912,0.576570202095319,0.382838137483752,0.50578890427775,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0,0.572499546967965,0.372158369359667,0,0.38126038784765,0.2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| |||
|short_description=p6@SCAF11 | |||
}} |
Revision as of 13:05, 11 January 2014
Short description: | p6@SCAF11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCAF11_5end |
Coexpression cluster: | NA |
Association with transcript: | 91bp_to_ENST00000266589, ENST00000369367_5end |
EntrezGene: | SCAF11 |
HGNC: | 10784 |
UniProt: | F8W6K1Q99590 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.67e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.67e-11 | 42 |
myeloid leukocyte | 8.42e-10 | 72 |
defensive cell | 4.23e-09 | 48 |
phagocyte | 4.23e-09 | 48 |
granulocyte monocyte progenitor cell | 4.27e-09 | 67 |
myeloid cell | 5.76e-08 | 108 |
common myeloid progenitor | 5.76e-08 | 108 |
macrophage dendritic cell progenitor | 5.79e-08 | 61 |
myeloid lineage restricted progenitor cell | 1.13e-07 | 66 |
embryonic stem cell | 4.84e-07 | 5 |
monopoietic cell | 8.41e-07 | 59 |
monocyte | 8.41e-07 | 59 |
monoblast | 8.41e-07 | 59 |
promonocyte | 8.41e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.36e-08 | 76 |
bone element | 1.26e-07 | 82 |
hematopoietic system | 2.89e-07 | 98 |
blood island | 2.89e-07 | 98 |