FFCP PHASE1:Hg19::chr12:100867736..100867750,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9971 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7967 | |||
|TSSclassifier=strong | |||
|UniProt=F8W1M1 | |||
|association_with_transcript=3bp_to_ENST00000546380_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_NR1H4_5end | |||
|id=chr12:100867736..100867750,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.83e-21!12;CL:0000417!7.83e-21!12;CL:0000668!7.83e-21!12;CL:0000414!7.83e-21!12;CL:0000412!7.83e-21!12;CL:0000182!7.83e-21!12;CL:0002622!6.95e-12!3;CL:0000064!1.22e-11!3;CL:0005012!1.22e-11!3;CL:0000067!1.22e-11!3;CL:0002304!1.22e-11!3;CL:0002195!1.80e-09!2;CL:0002571!1.80e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.22e-42;12!CL:0002195;1.96e-22;2!CL:0002571;1.96e-22;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.22e-42,12;CL:0002195,2.06e-22,2;CL:0002571,2.06e-22,2;CL:0000223,2.53e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.06e-46;11!UBERON:0009497;8.33e-39;13!UBERON:0003104;6.49e-20;31!UBERON:0001041;1.68e-16;30!UBERON:0006242;1.32e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!8.88e-34!19;UBERON:0006925!8.88e-34!19;UBERON:0008836!8.88e-34!19;UBERON:0009497!5.32e-29!25;UBERON:0000015!5.32e-29!25;UBERON:0002423!5.32e-29!25;UBERON:0006235!5.32e-29!25;UBERON:0004161!5.32e-29!25;UBERON:0008835!9.64e-29!22;UBERON:0003894!9.64e-29!22;UBERON:0009854!2.35e-27!23;UBERON:0002368!8.12e-26!35;UBERON:0007499!6.46e-25!25;UBERON:0005057!7.74e-24!26;UBERON:0009856!7.74e-24!26;UBERON:0002530!4.52e-22!59;UBERON:0003929!1.06e-19!54;UBERON:0002365!1.72e-19!31;UBERON:0002330!1.72e-19!31;UBERON:0005172!1.92e-19!55;UBERON:0005173!1.92e-19!55;UBERON:0000949!3.43e-19!45;UBERON:0002417!4.36e-17!61;UBERON:0000916!4.36e-17!61;UBERON:0000488!3.05e-15!4;UBERON:0005911!1.66e-14!82;UBERON:0001778!1.22e-11!3;UBERON:0001775!1.22e-11!3;UBERON:0004921!2.76e-10!129;UBERON:0004185!2.76e-10!129;UBERON:0002203!3.39e-10!6;UBERON:0001768!3.39e-10!6;UBERON:0005177!4.36e-10!107;UBERON:0000481!2.41e-09!347;UBERON:0009569!2.65e-09!113;UBERON:0005256!5.38e-09!143;UBERON:0001007!1.30e-08!155;UBERON:0001555!1.30e-08!155;UBERON:0007026!1.30e-08!155;UBERON:0000007!1.52e-08!2;UBERON:0000490!1.64e-08!138;UBERON:0001048!1.74e-08!168;UBERON:0000483!1.81e-08!309;UBERON:0002200!2.45e-08!11;UBERON:0006876!2.45e-08!11;UBERON:0000119!2.61e-08!312;UBERON:0000077!2.62e-08!130;UBERON:0000475!8.24e-08!365;UBERON:0000477!1.41e-07!286;UBERON:0002100!1.60e-07!216;UBERON:0004119!1.86e-07!169;UBERON:0000925!1.86e-07!169;UBERON:0006595!1.86e-07!169;UBERON:0003104!6.73e-07!238;UBERON:0009142!6.73e-07!238;UBERON:0001041!9.79e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.00e-66;19!UBERON:0006925;9.00e-66;19!UBERON:0002423;5.46e-59;25!UBERON:0002365;2.73e-38;31!UBERON:0002330;2.73e-38;31!UBERON:0002368;6.96e-35;33!UBERON:0000949;1.97e-22;43!UBERON:0005172;6.05e-21;52!UBERON:0005173;6.05e-21;52!UBERON:0002417;3.98e-15;58!UBERON:0000916;3.98e-15;58!UBERON:0002530;1.49e-13;57!UBERON:0009569;5.39e-08;110!UBERON:0001007;2.48e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.89e-66,19;UBERON:0006925,9.89e-66,19;UBERON:0008836,9.89e-66,19;UBERON:0009497,6.53e-59,25;UBERON:0000015,6.53e-59,25;UBERON:0002423,6.53e-59,25;UBERON:0006235,6.53e-59,25;UBERON:0004161,6.53e-59,25;UBERON:0008835,1.38e-56,22;UBERON:0003894,1.38e-56,22;UBERON:0009854,4.55e-54,23;UBERON:0007499,1.24e-49,25;UBERON:0009856,1.13e-47,26;UBERON:0002365,9.29e-40,31;UBERON:0002330,9.29e-40,31;UBERON:0002368,4.72e-35,35;UBERON:0005172,4.78e-31,54;UBERON:0005173,4.78e-31,54;UBERON:0002417,9.22e-28,60;UBERON:0000916,9.22e-28,60;UBERON:0000949,6.13e-27,45;UBERON:0003929,2.04e-26,54;UBERON:0002530,3.45e-20,59;UBERON:0005911,7.97e-20,82;UBERON:0005177,2.25e-18,101;UBERON:0009569,2.28e-16,112;UBERON:0001041,9.13e-16,87;UBERON:0003914,2.97e-11,117;UBERON:0004921,4.77e-11,118;UBERON:0001048,7.71e-11,160;UBERON:0005256,1.02e-10,122;UBERON:0001007,2.76e-10,145;UBERON:0001555,2.76e-10,145;UBERON:0007026,2.76e-10,145;UBERON:0003104,3.30e-09,160;UBERON:0009142,3.30e-09,160;UBERON:0004119,3.85e-09,160;UBERON:0000925,3.85e-09,160;UBERON:0006595,3.85e-09,160;UBERON:0000025,1.34e-08,192;UBERON:0000490,1.62e-08,148;UBERON:0002100,2.78e-08,199 | |||
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|short_description=p4@NR1H4 | |||
}} |
Revision as of 15:27, 11 January 2014
Short description: | p4@NR1H4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NR1H4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 3bp_to_ENST00000546380_5end |
EntrezGene: | NR1H4 |
HGNC: | 7967 |
UniProt: | F8W1M1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.22e-42 | 12 |
hepatic stem cell | 2.06e-22 | 2 |
hepatic mesenchymal stem cell | 2.06e-22 | 2 |
endodermal cell | 2.53e-08 | 58 |