FFCP PHASE1:Hg19::chr12:120729985..120730005,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-187bp_to_BC053934_5end | |||
|description=CAGE_peak_1_at_BC053934_5end | |||
|id=chr12:120729985..120730005,+ | |||
|ontology_enrichment_celltype=CL:0002031!4.79e-17!124;CL:0000738!8.39e-17!140;CL:0002087!2.26e-16!119;CL:0000542!1.05e-15!53;CL:0000051!1.05e-15!53;CL:0000037!1.22e-15!172;CL:0000566!1.22e-15!172;CL:0000838!3.24e-15!52;CL:0000988!7.89e-14!182;CL:0002032!9.20e-14!165;CL:0000837!9.20e-14!165;CL:0000084!1.33e-09!25;CL:0000827!1.33e-09!25;CL:0000791!1.36e-09!18;CL:0000789!1.36e-09!18;CL:0002420!1.36e-09!18;CL:0002419!1.36e-09!18;CL:0000790!1.36e-09!18;CL:0000860!1.48e-07!45;CL:0002057!2.41e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.41e-25;18!CL:0000789;3.41e-25;18!CL:0002419;3.41e-25;18!CL:0000084;1.21e-19;25!CL:0000542;9.53e-14;53!CL:0000625;1.04e-13;11!CL:0000624;4.70e-11;6!CL:0000623;2.80e-09;3!CL:0000898;1.61e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.03e-25,18;CL:0000789,1.03e-25,18;CL:0002420,1.03e-25,18;CL:0002419,1.03e-25,18;CL:0000790,1.03e-25,18;CL:0000838,1.55e-24,52;CL:0000542,6.17e-24,53;CL:0000051,6.17e-24,53;CL:0000084,3.94e-20,25;CL:0000827,3.94e-20,25;CL:0000738,1.45e-17,136;CL:0002031,4.45e-17,120;CL:0000037,6.90e-16,168;CL:0002087,1.35e-14,115;CL:0000988,1.62e-14,177;CL:0000625,3.72e-14,11;CL:0002032,6.29e-14,161;CL:0000837,6.29e-14,161;CL:0000624,3.95e-11,6;CL:0000623,2.85e-09,3;CL:0000825,2.85e-09,3;CL:0000898,1.23e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.41e-25;18!CL:0000051;9.53e-14;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.75e-07,4;UBERON:0005058,6.75e-07,4;UBERON:0009113,6.75e-07,4;UBERON:0003295,6.75e-07,4;UBERON:0005562,6.75e-07,4 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,1.0007329835313,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0.273748850145768,0.251085279189606,0.382067028739756,0.0821005894499457,0.157421562627358,3.54027849164014,1.91914699048606,0.464448369948228,0,0.30120591877825,0,1.47187681102573,0.284338464974843,1.46800219667424,0,0.802177789880567,0.868043482863407,0.671746422719773,0,0,0.436194716338694,0,0.485168122375632,0.464858073811369,0.822335776043652,0.619412741790207,0,0.256160706529101,0.47296445977717,1.03423704220986,1.29096936716765,1.35426486594342,0.188242339542605,0.272906150057846,0.449446968890169,0.306083892370903,1.28371610830437,0.639337125799041,0,0,0.426224750532694,0.290209238628584,0.56738522469114,0,0.502497330513487,1.0429658368404,0.868755378820466,0.605399502633369,1.10483290796269,0.632924774881769,0.211255286311942,0.425208599930087,0.209658645508376,0.44931452458598,0.600707571366025,0.803627933485401,1.14005097496499,0,0.182664153764634,0,0,1.77901850772711,1.28019066769952,0.800791974072025,0.574752439954483,1.32208974556972,2.86216126360609,0,1.76171156811282,0,0,0.560508562981536,0.263384084775077,2.55722701147983,0.393010762749165,3.08402248499264,0.668745981562712,2.28145586643513,0,3.89653456815823,0.891283655081389,1.47302953737419,1.32920336750173,1.89562704635511,0.512365278902701,0.650296737799391,0.657751618414705,0.552700035571697,0,3.41059095272739,1.87278579662799,7.31748666634838,1.0197840842781,3.83220493601921,3.09264700934367,3.03623630423403,1.59282707162048,0,1.90090408889675,1.20460095262218,0.895906278080929,0,1.89421801635213,2.46338399076314,5.44338206706778,3.7441627409691,2.46201486600758,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0.263504357079378,1.37528029272598,0.364295288292542,0,0,0,0,0.238490624305342,0,0.74291500265913,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.646584227275248,0,0,0.339121184620975,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0.69716365721711,0.10366105501537,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0.168584690078102,0,0,0,0.474541238222193,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,2.6487785964879,0.245976877086227,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0,0,0,0,1.58040879591855,4.29243081047436,0,0,0,0,0,0,0,0,0.383382679165211,0.492663237895943,0.176096868026452,1.86595303986695,1.8735593944205,2.39860623510122,0,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,2.12961773587702,3.34952292343276,4.31255149719035,4.62034930607094,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0.195801157462741,0,0.82707210449155,1.72571360654893,0.426910231213777,0.303127571446259,0,0.604780586659361,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0,0,0,0.116210378459959,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.657779629937804,1.0457418040996,0,0,0,1.23649213977267,0.27470839445503,0.247528499761764,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0.31481234683064,0,0.308033580176089,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,1.41215701165169,0,0,0,0,0,0.764637207142375,0,0.714695326373367,0,0.648473311192717,0.540031437238115,0,0,0,0,0.929015875628594,0.432807638929335,0.640276590135727,0.478278818186467,0,0,0.635020748171649,0.649243880549111,0.280797178113459,0.684704037099577,0,0,0.338583555603207,0,0,0.851692475380653,1.03051603426729,0,0,0,0,0.278406173895242,0,1.08182271390393,0,0,0,0.146508179271894,0.121360521749513,1.67165076416218,0,0.23874448473769,0,0.614321404198464,1.9882952955326,0.984685914873589,0.556543525114529,0.494411622680279,1.90012867315194,0.19924798825107,0.276283915531148,0,0.306806047506464,0.615424027305347,0,0.179736702294654,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0,0,0.7812832832557,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.709163045303809,0,0.291604613383254,0.347249989866585,0.885741385813839,1.32656082487949,0,1.43753037910592,0,0.438770794307945,0.32681539055697,0.139423744278603,0.538651809526579,0.341826167541004,0,0.179515288819544,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| |||
|short_description=p1@BC053934 | |||
}} |
Revision as of 16:15, 11 January 2014
Short description: | p1@BC053934 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC053934_5end |
Coexpression cluster: | NA |
Association with transcript: | -187bp_to_BC053934_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.03e-25 | 18 |
alpha-beta T cell | 1.03e-25 | 18 |
immature T cell | 1.03e-25 | 18 |
mature T cell | 1.03e-25 | 18 |
immature alpha-beta T cell | 1.03e-25 | 18 |
lymphoid lineage restricted progenitor cell | 1.55e-24 | 52 |
lymphocyte | 6.17e-24 | 53 |
common lymphoid progenitor | 6.17e-24 | 53 |
T cell | 3.94e-20 | 25 |
pro-T cell | 3.94e-20 | 25 |
leukocyte | 1.45e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 4.45e-17 | 120 |
hematopoietic stem cell | 6.90e-16 | 168 |
nongranular leukocyte | 1.35e-14 | 115 |
hematopoietic cell | 1.62e-14 | 177 |
CD8-positive, alpha-beta T cell | 3.72e-14 | 11 |
hematopoietic oligopotent progenitor cell | 6.29e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.29e-14 | 161 |
CD4-positive, alpha-beta T cell | 3.95e-11 | 6 |
natural killer cell | 2.85e-09 | 3 |
pro-NK cell | 2.85e-09 | 3 |
naive T cell | 1.23e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 6.75e-07 | 4 |
hemolymphoid system gland | 6.75e-07 | 4 |
thymic region | 6.75e-07 | 4 |
pharyngeal gland | 6.75e-07 | 4 |
thymus primordium | 6.75e-07 | 4 |