FFCP PHASE1:Hg19::chr13:49549932..49549944,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22862 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20296 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2H6 | |||
|association_with_transcript=-103bp_to_ENST00000492622,NM_001079673,uc001vcl.1,uc001vcm.2_5end | |||
|description=CAGE_peak_14_at_FNDC3A_5end | |||
|id=chr13:49549932..49549944,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.76e-13!42;CL:0000557!1.02e-12!71;CL:0000860!3.16e-12!45;CL:0000839!7.88e-12!70;CL:0002009!3.82e-10!65;CL:0000766!1.21e-09!76;CL:0002194!1.47e-09!63;CL:0000576!1.47e-09!63;CL:0000040!1.47e-09!63;CL:0000559!1.47e-09!63;CL:0000048!3.74e-08!430;CL:0000723!2.13e-07!436;CL:0000034!4.23e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.93e-21;33!CL:0002057;1.93e-21;33!CL:0000473;3.71e-17;39!CL:0000234;3.71e-17;39!CL:0000576;3.43e-10;48!CL:0000197;1.14e-08;6!CL:0000098;1.14e-08;6!CL:0002167;1.14e-08;6!CL:0000766;8.21e-08;69!CL:0000075;2.80e-07;27!CL:0000710;3.60e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,9.64e-18,48;CL:0000234,9.64e-18,48;CL:0000860,6.44e-17,42;CL:0002057,6.44e-17,42;CL:0000557,6.27e-16,67;CL:0000839,6.09e-15,66;CL:0000766,2.29e-14,72;CL:0002194,6.58e-13,59;CL:0000576,6.58e-13,59;CL:0000040,6.58e-13,59;CL:0000559,6.58e-13,59;CL:0002009,2.73e-12,61;CL:0000763,1.20e-09,108;CL:0000049,1.20e-09,108;CL:0000197,1.07e-08,6;CL:0000098,1.07e-08,6;CL:0002167,1.07e-08,6;CL:0000075,2.30e-07,27;CL:0000710,4.88e-07,20 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.98e-13!80;UBERON:0001474!2.30e-11!86;UBERON:0002204!4.58e-11!167;UBERON:0004765!6.56e-11!101;UBERON:0001434!6.56e-11!101;UBERON:0002405!1.35e-09!115;UBERON:0002390!5.16e-09!102;UBERON:0003061!5.16e-09!102;UBERON:0002193!9.92e-08!112;UBERON:0003081!5.84e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.44e-13,76;UBERON:0001474,1.04e-11,82;UBERON:0002405,2.12e-11,93;UBERON:0004765,4.30e-11,90;UBERON:0001434,2.80e-09,100;UBERON:0002193,8.27e-09,108;UBERON:0002390,1.08e-08,98;UBERON:0003061,1.08e-08,98 | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,1.74467704820074,0,0,1.04474251279935,0,0,0,1.05506791291381,0.247532705920093,0.662794751455832,6.05092631806598,3.61616716814386,5.11217063271161,1.46379839637152,0.123121058076788,0.204000691244253,0.626909442956176,0.286235987131057,0,0.125542639594803,0,0.0821005894499457,0.0787107813136792,0,0.383829398097213,1.54816123316076,0,0,0,0,0,0.880801318004542,0.553995408531877,0.601633342410425,0,0.447830948479849,0,0,2.32637182047304,0.755751887377619,1.4555043671269,2.32429036905685,1.23350366406548,1.54853185447552,1.1507695692886,3.07392847834921,0.945928919554341,0.689491361473237,0.645484683583826,1.35426486594342,1.88242339542605,1.63743690034707,2.02251136000576,3.36692281607993,0,1.91801137739712,0.989553900560148,1.79517291859469,0,0.290209238628584,3.97169657283798,4.35975574296902,1.00499466102697,1.5644487552606,1.08594422352558,0.605399502633369,0.736555271975129,1.26584954976354,0,0.637812899895131,0.419317291016752,0.561643155732475,1.50176892841506,0.16072558669708,0,0.79566670879636,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0,0.764546456250458,0,0,0.790152254325231,0.590129310341499,0,0,0.334372990781356,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0.221533894583621,0.812411591295047,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0.296573126324121,0.535081656179426,1.04535523804977,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,1.79007586580942,0,0.50133791063589,0.434539556882471,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0.370784442784429,0.97364218096405,0.522389211897802,0.26591592103773,0,0,0.371457501329565,0.198762407366705,0,1.04142150482278,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,1.20848795132744,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0,1.98788780678127,0.25326102332916,3.04541115870403,0.286836620748814,0,0,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0.454072282934794,0.576175924479999,0.234321431833797,0,1.1409436430889,0.149448680551801,0,0,0,0,0.368502951935304,0.103325781175765,0,0.989067717114227,0,0,0.673344455816265,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0,0.213557388818567,0.423863802319124,1.20036438433761,0.206105058476878,0,0,1.35021065793013,0.0974370051611986,0,0,1.61646056818812,0.710019185033229,0.302256294682921,0.339121184620975,0.386521706326594,0,0,0.121973706129595,0,0,0,1.00928340350251,0,1.56449532329816,0,0,0,1.44375896333917,0.828147600278907,0.505754070234305,0.723033089650446,1.10293972732394,0.217879444092406,0.949082476444386,1.21348177344148,0,0.38474715694639,0,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0,0,0,1.3725424823882,0.109750285408626,0,0,0,0,1.03993478527958,0,1.97081688457631,1.99594780200897,0,1.85194205030644,1.14152491340759,0,0,0.984868024349589,0,0.445893486866185,0,0.335964256397719,0.141775097242386,0.358234090811393,0.581267877027924,0,0.492663237895943,2.55340458638356,2.48793738648926,0.720599767084807,2.39860623510122,1.26995788584338,0.381988425558278,0,0,0.205654985406647,5.70651809903443,7.71731368102561,0.448524337381443,0,0.07333828582095,0.129271715757778,0,1.690605505112,0,1.04007436911366,0.257207374262142,0,0.799266537048298,0,0,0,0.65147236858747,0.355391948742546,0,0.301439377059586,0,0.299918973546171,4.86495122564762,10.0451418286425,0,0.479249710983165,0,1.42636905040718,0.579125226670317,0.205476322550383,0,0.112085143993527,0,0,0.256686072559497,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,2.17012018959788,1.87173775377726,3.39015078714607,1.57702415033935,1.17141414992713,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0.260650843404249,0.195801157462741,0,0.206768026122887,0,0.213455115606889,0,0,0.30239029332968,0,1.53461973288062,0.561320188866147,0.128139149255701,0,0.482561763430822,0,0.154209693802656,0.177561725313127,0.410635780069046,0,0.348631135379878,0,0.200506470303285,0.184161977871793,0.114814448164607,0,0.655622074797121,0.451199612907412,0,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0.215915916102139,0,0.541892875087706,0.501689773854853,0,0.831076008928724,0.223874754722178,0.219259876645935,0.261435451024901,0,0,0,0.206082023295445,0.0915694648183434,0.082509499920588,0,0.650060246036521,0,0,0,0.307007349452259,0,0.214840489736547,0.145016693914229,0.255679882248303,0,0,0,0.510450849978337,0,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0.55597265731176,0.429374660225974,0.372158369359667,0,0.571890581771475,0.767693373934002,0,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0.404364963146632,0,0,0.48763373908959,0,0,0.409499734223957,0.282810863907425,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0.5633912050644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| |||
|short_description=p14@FNDC3A | |||
}} |
Revision as of 17:45, 11 January 2014
Short description: | p14@FNDC3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_FNDC3A_5end |
Coexpression cluster: | NA |
Association with transcript: | -103bp_to_ENST00000492622, NM_001079673, uc001vcl.1, uc001vcm.2_5end |
EntrezGene: | FNDC3A |
HGNC: | 20296 |
UniProt: | Q9Y2H6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 9.64e-18 | 48 |
phagocyte | 9.64e-18 | 48 |
classical monocyte | 6.44e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.44e-17 | 42 |
granulocyte monocyte progenitor cell | 6.27e-16 | 67 |
myeloid lineage restricted progenitor cell | 6.09e-15 | 66 |
myeloid leukocyte | 2.29e-14 | 72 |
monopoietic cell | 6.58e-13 | 59 |
monocyte | 6.58e-13 | 59 |
monoblast | 6.58e-13 | 59 |
promonocyte | 6.58e-13 | 59 |
macrophage dendritic cell progenitor | 2.73e-12 | 61 |
myeloid cell | 1.20e-09 | 108 |
common myeloid progenitor | 1.20e-09 | 108 |
receptor cell | 1.07e-08 | 6 |
sensory epithelial cell | 1.07e-08 | 6 |
olfactory epithelial cell | 1.07e-08 | 6 |
columnar/cuboidal epithelial cell | 2.30e-07 | 27 |
neurecto-epithelial cell | 4.88e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.44e-13 | 76 |
bone element | 1.04e-11 | 82 |
immune system | 2.12e-11 | 93 |
skeletal element | 4.30e-11 | 90 |
skeletal system | 2.80e-09 | 100 |
hemolymphoid system | 8.27e-09 | 108 |
hematopoietic system | 1.08e-08 | 98 |
blood island | 1.08e-08 | 98 |