FFCP PHASE1:Hg19::chr13:50589574..50589585,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=283518 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18893 | |||
|TSSclassifier=weak | |||
|UniProt=Q8N5I3 | |||
|association_with_transcript=184bp_to_ENST00000312942,ENST00000360473,NM_173605,NM_199464,uc001vdt.2,uc001vdu.2_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_1_at_KCNRG_5end | |||
|id=chr13:50589574..50589585,+ | |||
|ontology_enrichment_celltype=CL:0000064!4.05e-08!3;CL:0005012!4.05e-08!3;CL:0000067!4.05e-08!3;CL:0002304!4.05e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.17e-17;2!UBERON:0008947;4.64e-11;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!7.89e-13!2;UBERON:0006947!9.08e-09!3;UBERON:0004054!9.08e-09!3;UBERON:0001778!4.05e-08!3;UBERON:0001775!4.05e-08!3;UBERON:0004175!1.62e-07!25;UBERON:0001301!2.66e-07!1;UBERON:0002171!2.99e-07!1;UBERON:0006518!2.99e-07!1;UBERON:0008949!2.99e-07!1;UBERON:0000101!2.99e-07!1;UBERON:0002167!2.99e-07!1;UBERON:0007029!3.78e-07!1;UBERON:0000998!4.25e-07!1;UBERON:0006868!4.25e-07!1;UBERON:0005904!9.01e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;8.34e-34;1!UBERON:0003127;5.48e-18;2!UBERON:0000341;1.17e-17;2!UBERON:0006947;3.06e-12;3!UBERON:0004054;3.06e-12;3!UBERON:0005904;1.63e-09;4!UBERON:0005178;1.63e-07;34!UBERON:0002224;1.63e-07;34!UBERON:0002048;5.24e-07;22!UBERON:0000117;5.24e-07;22!UBERON:0000171;5.24e-07;22!UBERON:0000170;5.24e-07;22!UBERON:0000974;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,7.06e-34,1;UBERON:0003127,5.48e-18,2;UBERON:0000341,1.27e-17,2;UBERON:0006947,2.89e-12,3;UBERON:0004054,2.89e-12,3;UBERON:0005178,1.53e-09,34;UBERON:0002224,1.53e-09,34;UBERON:0005904,1.57e-09,4;UBERON:0005181,2.73e-09,35;UBERON:0008947,1.30e-08,38;UBERON:0003258,1.30e-08,38;UBERON:0007023,1.14e-07,114;UBERON:0002048,5.24e-07,22;UBERON:0000117,5.24e-07,22;UBERON:0000171,5.24e-07,22;UBERON:0000170,5.24e-07,22;UBERON:0005597,5.24e-07,22;UBERON:0000118,5.24e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34932307648928,6.75978511928564,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,4.06135773085989,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.0661699095049,0.714193294391221,0,0,0,0,0,0,0,0,9.03699787947722,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@KCNRG | |||
}} |
Revision as of 17:48, 11 January 2014
Short description: | p1@KCNRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNRG_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 184bp_to_ENST00000312942, ENST00000360473, NM_173605, NM_199464, uc001vdt.2, uc001vdu.2_5end |
EntrezGene: | KCNRG |
HGNC: | 18893 |
UniProt: | Q8N5I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 7.06e-34 | 1 |
open tracheal system trachea | 5.48e-18 | 2 |
throat | 1.27e-17 | 2 |
male genital duct | 2.89e-12 | 3 |
internal male genitalia | 2.89e-12 | 3 |
thoracic cavity element | 1.53e-09 | 34 |
thoracic cavity | 1.53e-09 | 34 |
duct of male reproductive system | 1.57e-09 | 4 |
thoracic segment organ | 2.73e-09 | 35 |
respiratory primordium | 1.30e-08 | 38 |
endoderm of foregut | 1.30e-08 | 38 |
adult organism | 1.14e-07 | 114 |
lung | 5.24e-07 | 22 |
respiratory tube | 5.24e-07 | 22 |
respiration organ | 5.24e-07 | 22 |
pair of lungs | 5.24e-07 | 22 |
lung primordium | 5.24e-07 | 22 |
lung bud | 5.24e-07 | 22 |