FFCP PHASE1:Hg19::chr15:39885810..39885845,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11785 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=-423bp_to_ENST00000559746_5end | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_21_at_THBS1_5end | |||
|id=chr15:39885810..39885845,+ | |||
|ontology_enrichment_celltype=CL:0002371!2.97e-20!591;CL:0000144!3.36e-19!625;CL:0000548!5.97e-17!679;CL:0000004!5.97e-17!679;CL:0000255!5.97e-17!679;CL:0000055!6.98e-17!180;CL:0000012!7.28e-17!682;CL:0000222!1.15e-16!119;CL:0000057!5.53e-15!75;CL:0000220!1.08e-12!246;CL:0002139!2.48e-12!24;CL:0002321!3.01e-12!248;CL:0002078!4.17e-12!44;CL:0000115!8.23e-12!35;CL:0000003!7.48e-11!722;CL:0000213!2.86e-10!57;CL:0000215!2.86e-10!57;CL:0000071!3.04e-09!18;CL:0002546!3.04e-09!18;CL:0000063!1.47e-08!578;CL:0000359!1.71e-08!32;CL:0002334!4.47e-08!12;CL:0002620!9.21e-08!23;CL:0000192!2.37e-07!42;CL:0000514!2.37e-07!42;CL:0000680!5.50e-07!57;CL:0000056!5.50e-07!57;CL:0000355!5.50e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.31e-17;24!CL:0000115;5.22e-15;36!CL:0000071;1.13e-12;18!CL:0002334;4.75e-11;12!CL:0002620;2.90e-09;23!CL:1000413;8.38e-09;9!CL:0002078;1.71e-08;45!CL:0000057;4.09e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.23e-19,76;CL:0002139,4.92e-18,24;CL:0000115,1.74e-17,36;CL:0000071,4.80e-13,18;CL:0002546,4.80e-13,18;CL:0002078,3.08e-12,45;CL:0002334,5.09e-11,12;CL:0000222,3.26e-10,121;CL:0000213,3.53e-10,58;CL:0000215,3.53e-10,58;CL:0002620,3.20e-09,23;CL:1000413,4.53e-09,9;CL:0000723,6.08e-08,433;CL:0000048,2.16e-07,427;CL:0000034,2.64e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002546;1.13e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;3.24e-07;5!DOID:450;3.24e-07;5!DOID:66;3.24e-07;5!DOID:423;3.24e-07;5!DOID:0080000;3.24e-07;5!DOID:11722;3.24e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,3.94e-07,5;DOID:450,3.94e-07,5;DOID:66,3.94e-07,5;DOID:423,3.94e-07,5;DOID:0080000,3.94e-07,5;DOID:11722,3.94e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.73e-22!69;UBERON:0001981!2.16e-21!60;UBERON:0007500!2.16e-21!60;UBERON:0004537!2.16e-21!60;UBERON:0006965!2.16e-21!60;UBERON:0002049!1.13e-20!79;UBERON:0007798!1.13e-20!79;UBERON:0004872!1.80e-20!84;UBERON:0001637!5.87e-16!42;UBERON:0003509!5.87e-16!42;UBERON:0004572!5.87e-16!42;UBERON:0003914!3.96e-15!118;UBERON:0004535!7.39e-15!110;UBERON:0001009!1.39e-14!113;UBERON:0004573!6.39e-12!33;UBERON:0004571!6.39e-12!33;UBERON:0000490!4.62e-10!138;UBERON:0000947!1.31e-09!21;UBERON:0010191!1.31e-09!21;UBERON:0001986!3.04e-09!18;UBERON:0004638!3.04e-09!18;UBERON:0004852!3.04e-09!18;UBERON:0000487!2.49e-08!22;UBERON:0000468!4.51e-08!659;UBERON:0006914!5.18e-08!25;UBERON:0000467!7.73e-08!625;UBERON:0003081!8.38e-08!216;UBERON:0000480!1.05e-07!626;UBERON:0005256!1.44e-07!143;UBERON:0003102!1.53e-07!95;UBERON:0000914!3.57e-07!83;UBERON:0002329!3.57e-07!83;UBERON:0003077!3.57e-07!83;UBERON:0003059!3.57e-07!83;UBERON:0007282!3.57e-07!83;UBERON:0009618!3.57e-07!83;UBERON:0007285!3.57e-07!83;UBERON:0000486!3.88e-07!82;UBERON:0000926!4.61e-07!448;UBERON:0004120!4.61e-07!448;UBERON:0006603!4.61e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;4.54e-13;56!UBERON:0001981;4.54e-13;56!UBERON:0004537;4.54e-13;56!UBERON:0004638;1.13e-12;18!UBERON:0001986;1.13e-12;18!UBERON:0004852;1.13e-12;18!UBERON:0000055;2.89e-12;65!UBERON:0000487;4.27e-12;22!UBERON:0001637;6.81e-12;42!UBERON:0003509;6.81e-12;42!UBERON:0004572;6.81e-12;42!UBERON:0006914;5.11e-10;25!UBERON:0004573;5.84e-10;33!UBERON:0004571;5.84e-10;33!UBERON:0000490;5.64e-09;33!UBERON:0003915;8.38e-09;9!UBERON:0004700;8.38e-09;9!UBERON:0001917;8.38e-09;9!UBERON:0003914;2.50e-08;74!UBERON:0000947;3.10e-08;21!UBERON:0010191;3.10e-08;21!UBERON:0003688;3.57e-08;6!UBERON:0002358;3.57e-08;6!UBERON:0003684;3.57e-08;6!UBERON:0001178;3.57e-08;6!UBERON:0002097;1.64e-07;41!UBERON:0003513;1.89e-07;7!UBERON:0002049;2.40e-07;75!UBERON:0007798;2.40e-07;75!UBERON:0002199;4.25e-07;46!UBERON:0002416;4.25e-07;46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.07e-22,68;UBERON:0007500,1.32e-19,59;UBERON:0001981,1.32e-19,59;UBERON:0004537,1.32e-19,59;UBERON:0006965,1.32e-19,59;UBERON:0002049,1.16e-17,78;UBERON:0007798,1.16e-17,78;UBERON:0004872,2.21e-17,83;UBERON:0001637,5.90e-15,42;UBERON:0003509,5.90e-15,42;UBERON:0004572,5.90e-15,42;UBERON:0004638,4.80e-13,18;UBERON:0001986,4.80e-13,18;UBERON:0004852,4.80e-13,18;UBERON:0000487,1.81e-12,22;UBERON:0003914,2.47e-12,117;UBERON:0004535,2.97e-12,109;UBERON:0001009,1.50e-11,112;UBERON:0006914,2.47e-10,25;UBERON:0004573,3.89e-10,33;UBERON:0004571,3.89e-10,33;UBERON:0002199,6.37e-10,46;UBERON:0002416,6.37e-10,46;UBERON:0002097,6.83e-10,41;UBERON:0003102,3.81e-09,99;UBERON:0003915,4.53e-09,9;UBERON:0004700,4.53e-09,9;UBERON:0001917,4.53e-09,9;UBERON:0003081,1.04e-08,203;UBERON:0000947,2.17e-08,21;UBERON:0010191,2.17e-08,21;UBERON:0003688,3.10e-08,6;UBERON:0002358,3.10e-08,6;UBERON:0003684,3.10e-08,6;UBERON:0001178,3.10e-08,6;UBERON:0003513,2.58e-07,7;UBERON:0000490,3.01e-07,148 | |||
|phase1_expression=4.54195948176392,23.9792586757901,2.96004248601539,34.0249214400643,5.36353313312745,18.3191090061077,0,0,0.261185628199839,1.47440361900905,0,2.62129646556207,2.11013582582763,0.123766352960047,1.65698687863958,3.36162573225888,10.8485015044316,4.38186054232424,5.85519358548608,0,0.408001382488506,0.313454721478088,0.286235987131057,0.410623275218653,0.753255837568817,0,0,0,0,0,0.464448369948228,0,1.50602959389125,1.10926203050036,0,0,0,0.553995408531877,3.60980005446255,0.217010870715852,0.223915474239924,0,0,0.290796477559129,0,0,1.62700325833979,0,0,3.16461631554365,0,0,1.37898272294647,1.29096936716765,0,1.69418105588344,0.818718450173537,0,4.28517449319264,0.320929027076094,0.639337125799041,0,0.199463657621632,0,7.2552309657146,1.13477044938228,0,3.01498398308092,0,0.217188844705117,3.63239701580021,0,0,0,0,0,0.112328631146495,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,2.55725123687061,0.361439152384566,4.51204119572301,2.02785126545153,0.795285947051099,2.43317435151318,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,1.39133685156694,1.72046919021225,2.42998351125316,1.69592382577203,2.93649605346934,6.32771496462155,1.67195973229448,1.8089173141853,1.42306505074684,1.00416183829401,3.62546385398232,6.84244895146661,8.29810995663776,5.14728312484216,8.91156142669936,2.14319347881791,1.34717623575702,0.900891843866578,0,1.89853131913626,3.66403487860815,0,0,1.3082821564276,10.933382937297,6.45815609489357,2.78059279707759,2.58152958673932,0.709336764396714,0,1.06748995729705,12.0867098724408,0,0.269421344139376,1.9615428373615,0.151357427644931,0,0,0,0,0.747243402759005,0.23486899728753,0.161872944368132,0.140450806702248,1.02077085627447,0.245668634623536,0.206651562351531,2.37600571456411,12.6106133932064,0,0,0.168336113954066,0,0.554128230968366,1.75591048352335,15.017901994152,3.75595147266492,1.70148274740032,10.404598869954,8.11518077510556,5.93409323246773,5.40163972951924,3.09157587715317,8.24449728146013,3.16398655763703,3.71307930930786,3.02054715999716,4.29137416214995,3.49789614840738,2.7479829659198,6.03516307278244,2.31729825923573,3.89989362314122,0.57978255948989,1.09098448236334,0.860413786167011,0,0,0,0,0,0,0,18.6539872075937,0,6.96551892047969,4.33127689001751,0.354920400119532,0.168584690078102,0,0.330881918197182,0.435758888184812,0.237270619111097,0.539325232640658,0.784885860501384,0.38474715694639,2.21446636387394,4.20725321410337,0,2.94017422771084,0,0,0,0,0,0.686271241194102,1.42675371031213,0,2.01057944823262,1.75918045801206,0,0,0,0,0,3.75352764178792,8.7967247389556,8.94194515502612,0,0,0,0,0,0,2.85569617938061,0.992425680696705,2.4180801129769,1.16253575405585,3.06706143332169,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,0.224262168690721,0,0.07333828582095,0.517086863031111,0,0.845302752556,1.32969058292435,3.12022310734098,0,1.41849132023278,0,0.428933980974443,0,0.823240336780769,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,2.15662369942424,4.59447743336456,0,2.02693829334611,0.410952645100767,0.537182889719687,0,0,0,0,0,0,0,0.335032530668698,0.637938751653163,0,0,0,0.49076596687656,0,0.271265023699736,8.11086359970148,29.9760701179232,9.77754973210395,5.50564650465752,1.20378439891088,0,0,0,1.29058417979192,2.17209036170207,0.391602314925481,0.343143423810856,0,0,0.106727557803444,0.606255142892519,1.66435439510497,3.32629322662648,3.2254015016441,12.5838818096211,21.8914873657797,3.33161788064823,6.65219423786715,13.511729376063,4.45254199334973,2.62156479464514,2.30830242907065,0.328508624055237,2.59627214591811,1.27831416305955,0,4.41114234667227,0.368323955743585,1.14814448164607,1.27463817604702,2.09799063935079,0.451199612907412,0,0,0,0,3.4120015221269,1.02056223165909,1.0795795805107,9.25363516141736,0,0,0.764628819135115,0.831076008928724,0.223874754722178,0,0.261435451024901,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0,1.14853107599234,1.95018073810956,1.6068392984416,0,0,0.15350367472613,0.413509717453592,0.644521469209642,0.145016693914229,0.255679882248303,0.356128142586949,0.991709492165869,1.15314040419064,1.40373983744043,0.50578890427775,0.929691098594572,6.92587163027408,0.6970372701606,0.616067160352178,0.532306030317022,0,0.74129687641568,0.143124886741991,0,0.632758849437452,0,0,0,0.318203247925937,1.56989728039846,1.79872457583315,0,0.471249609382746,0.202182481573316,0,1.26377536871694,0,3.1682753652067,3.16950440270266,0.818999468447914,1.83827061539827,1.13008116620243,1.10273068709225,4.64407282668854,1.75380354101505,0,0.655894752046633,0.811641507850816,3.40805847909725,1.69017361519345,0.573645408816206,1.27723753317057,3.21003946333125,0,0.422215270595328,0.987884678879706,0,0.699869440489966,0.288666338176536,0.670302275535787,0,0.188287601553558,2.15252686335615,3.36942951335251,3.54744122829341,6.43225520579487,0.507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| |||
|short_description=p21@THBS1 | |||
}} |
Revision as of 22:56, 11 January 2014
Short description: | p21@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -423bp_to_ENST00000559746_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.23e-19 | 76 |
endothelial cell of vascular tree | 4.92e-18 | 24 |
endothelial cell | 1.74e-17 | 36 |
blood vessel endothelial cell | 4.80e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.80e-13 | 18 |
meso-epithelial cell | 3.08e-12 | 45 |
preadipocyte | 5.09e-11 | 12 |
mesodermal cell | 3.26e-10 | 121 |
lining cell | 3.53e-10 | 58 |
barrier cell | 3.53e-10 | 58 |
skin fibroblast | 3.20e-09 | 23 |
endothelial cell of artery | 4.53e-09 | 9 |
somatic stem cell | 6.08e-08 | 433 |
multi fate stem cell | 2.16e-07 | 427 |
stem cell | 2.64e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.94e-07 | 5 |
myotonic disease | 3.94e-07 | 5 |
muscle tissue disease | 3.94e-07 | 5 |
myopathy | 3.94e-07 | 5 |
muscular disease | 3.94e-07 | 5 |
myotonic dystrophy | 3.94e-07 | 5 |