FFCP PHASE1:Hg19::chr15:49256110..49256122,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399694 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16743 | |||
|TSSclassifier=weak | |||
|UniProt=Q6S5L8 | |||
|association_with_transcript=-469bp_to_ENST00000332408,NM_203349,uc001zxb.1_5end | |||
|description=CAGE_peak_11_at_SHC4_5end | |||
|id=chr15:49256110..49256122,- | |||
|ontology_enrichment_celltype=CL:0000133!7.81e-11!59;CL:0000333!7.57e-10!41;CL:0000221!1.24e-09!71;CL:0000148!8.34e-08!10;CL:0000541!8.34e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;3.83e-32;10!CL:0002567;8.98e-28;3!CL:0000147;7.15e-23;14!CL:0000710;6.68e-16;20!CL:0000075;1.13e-11;27!CL:0002077;3.26e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.79e-32,10;CL:0000541,1.79e-32,10;CL:0002567,5.69e-28,3;CL:0000147,4.17e-23,14;CL:0000710,4.61e-16,20;CL:0000333,1.27e-12,41;CL:0000075,8.64e-12,27;CL:0000133,6.59e-11,59;CL:0002077,2.86e-09,34;CL:0000221,9.08e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.57e-18!94;UBERON:0001016!1.57e-18!94;UBERON:0001017!9.26e-17!82;UBERON:0005743!2.55e-16!86;UBERON:0000924!2.11e-15!173;UBERON:0006601!2.11e-15!173;UBERON:0001049!5.37e-15!57;UBERON:0005068!5.37e-15!57;UBERON:0006241!5.37e-15!57;UBERON:0007135!5.37e-15!57;UBERON:0002346!1.30e-14!90;UBERON:0004121!5.14e-14!169;UBERON:0003075!4.92e-13!86;UBERON:0007284!4.92e-13!86;UBERON:0000955!3.86e-12!69;UBERON:0006238!3.86e-12!69;UBERON:0002780!7.32e-12!41;UBERON:0001890!7.32e-12!41;UBERON:0006240!7.32e-12!41;UBERON:0003080!2.11e-11!42;UBERON:0002616!5.99e-11!59;UBERON:0001893!4.96e-10!34;UBERON:0003056!1.82e-09!61;UBERON:0002791!2.62e-09!33;UBERON:0000033!3.02e-09!123;UBERON:0002020!4.03e-09!34;UBERON:0003528!4.03e-09!34;UBERON:0001869!8.16e-09!32;UBERON:0000956!1.74e-08!25;UBERON:0000203!1.74e-08!25;UBERON:0001950!1.76e-08!20;UBERON:0000153!3.11e-08!129;UBERON:0007811!3.11e-08!129;UBERON:0000483!5.47e-08!309;UBERON:0000025!7.89e-08!194;UBERON:0004111!8.83e-08!241;UBERON:0000119!1.05e-07!312;UBERON:0007023!1.53e-07!115;UBERON:0002619!2.13e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.06e-19;2!UBERON:0002757;2.06e-19;2!UBERON:0010134;2.06e-19;2!UBERON:0005408;2.06e-19;2!UBERON:0001899;2.06e-19;2!UBERON:0003296;3.53e-10;4!UBERON:0010133;3.53e-10;4!UBERON:0002784;3.53e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.13e-19,2;UBERON:0002757,3.13e-19,2;UBERON:0010134,3.13e-19,2;UBERON:0005408,3.13e-19,2;UBERON:0001899,3.13e-19,2;UBERON:0003296,4.35e-10,4;UBERON:0010133,4.35e-10,4;UBERON:0002784,4.35e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,1.46062018077475,0,0,0,0,0,0.410623275218653,0.502170558379211,0.152826811495903,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0,0,2.91980922181582,0.567208902984407,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0.264818361626438,0.573673241497627,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0,0,0,1.03993478527958,0,0,0.117408694235822,0,0.462985512576611,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0.290633938513962,0.766765358330422,0.985326475791887,0,0,0,0.12624243342638,0.190493682876507,1.14596527667483,2.34434894420094,1.71072446022705,2.98199728839638,1.8020583470635,1.14330573052231,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0.508189248444927,0,0.773288812777695,2.51274398001523,0.637938751653163,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0.229628896329213,0.364182336013434,0,0,0.770153371044148,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0,0,0,0,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0.924100740528266,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.353437207037059,0,0,0.421258456238981,0,0,0,0,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,1.00177834520615,0,0,0.19924798825107,0,0,7.05653909264868,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0.139423744278603,0.0769502585037971,0,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.146178634172371,0,0,0,0,0.137041924646751,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0.104602846312333,0,0,1.20084057741958,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,1.6135860539956,0.191915197319445,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.511164065356265,0,0,0,0,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0.573409195690071,0.332787154610557,0.310482014706917,0.415045904808692,0.249960815924213,1.06154382279153,0.570930667089935,0.470531639396343,0,0.28984205722165,0,0,0,0,0,0,0,0,0.310874401165561,0.443565449968902,0.159296767163702,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0.429642228169954,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0,0,0.368211900503681,0,0,0.255788742607303,0.107824811396682,0.157265941855896,0.218419276384028,0,0.637724760305049,0.123935764259002,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0.41023272848151,1.00828678488687,0.0691572524642179,0.322951291263702,0,0,0.11796972334774,0,0.115525666150338,0,0,0,0,0,0,0,0.49131575253029,0,0.337687923091973,0,0.413373593002368,0.19024743058172,1.09394961803644,0,0,1.05522746615772,0,4.82131652290458,1.00885116665647,0,0.682986574053893,0,0,0,0.135939465953663,0.197318320688547,0,0.667388411352415,0,0,0,0,0.647782773655864,0,0.285906176706625,0,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0.170426809518315,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0.397901550322736,0,0.11294608203896,0.109940516745429,0,0,0,0.940634592723046,0,0.235676547101626,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,3.52894871715692,0,0,0.458729283404541,0.286679166302903,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0.20686599172379,0,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0.0673520530145875,0.358611026963382,0,0.325613074443898,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p11@SHC4 | |||
}} |
Revision as of 23:26, 11 January 2014
Short description: | p11@SHC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SHC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -469bp_to_ENST00000332408, NM_203349, uc001zxb.1_5end |
EntrezGene: | SHC4 |
HGNC: | 16743 |
UniProt: | Q6S5L8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.79e-32 | 10 |
melanoblast | 1.79e-32 | 10 |
light melanocyte | 5.69e-28 | 3 |
pigment cell | 4.17e-23 | 14 |
neurecto-epithelial cell | 4.61e-16 | 20 |
migratory neural crest cell | 1.27e-12 | 41 |
columnar/cuboidal epithelial cell | 8.64e-12 | 27 |
neurectodermal cell | 6.59e-11 | 59 |
ecto-epithelial cell | 2.86e-09 | 34 |
ectodermal cell | 9.08e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.13e-19 | 2 |
regional part of epithalamus | 3.13e-19 | 2 |
secretory circumventricular organ | 3.13e-19 | 2 |
circumventricular organ | 3.13e-19 | 2 |
epithalamus | 3.13e-19 | 2 |
gland of diencephalon | 4.35e-10 | 4 |
neuroendocrine gland | 4.35e-10 | 4 |
regional part of diencephalon | 4.35e-10 | 4 |