FFCP PHASE1:Hg19::chr15:50429597..50429636,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr15:50429597..50429636,- | |||
|id=chr15:50429597..50429636,- | |||
|ontology_enrichment_celltype=CL:0000860!3.47e-42!45;CL:0002057!5.92e-38!42;CL:0002009!1.92e-32!65;CL:0000557!2.59e-30!71;CL:0002194!9.81e-30!63;CL:0000576!9.81e-30!63;CL:0000040!9.81e-30!63;CL:0000559!9.81e-30!63;CL:0000766!2.35e-27!76;CL:0000839!3.53e-27!70;CL:0000763!2.23e-20!112;CL:0000049!2.23e-20!112;CL:0002031!1.60e-16!124;CL:0000738!6.66e-16!140;CL:0002087!1.20e-14!119;CL:0000988!3.34e-13!182;CL:0000048!3.35e-13!430;CL:0002032!4.05e-13!165;CL:0000837!4.05e-13!165;CL:0000034!1.04e-12!444;CL:0000723!1.05e-12!436;CL:0000037!4.60e-12!172;CL:0000566!4.60e-12!172;CL:0000134!1.16e-11!358;CL:0002320!1.38e-11!365;CL:0002620!2.46e-11!23;CL:0000219!5.39e-09!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.08e-64;33!CL:0002057;7.08e-64;33!CL:0000473;1.63e-44;39!CL:0000234;1.63e-44;39!CL:0000576;3.56e-32;48!CL:0000766;1.24e-17;69!CL:0002087;1.29e-10;104!CL:0000763;6.61e-08;100!CL:0000738;4.99e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.13e-60,42;CL:0002057,3.13e-60,42;CL:0000473,4.09e-52,48;CL:0000234,4.09e-52,48;CL:0002009,4.72e-43,61;CL:0002194,9.54e-41,59;CL:0000576,9.54e-41,59;CL:0000040,9.54e-41,59;CL:0000559,9.54e-41,59;CL:0000557,8.04e-39,67;CL:0000839,5.39e-36,66;CL:0000766,1.20e-32,72;CL:0002031,7.22e-24,120;CL:0002087,5.66e-23,115;CL:0000763,2.30e-22,108;CL:0000049,2.30e-22,108;CL:0000738,1.83e-20,136;CL:0000988,2.45e-19,177;CL:0002032,1.73e-16,161;CL:0000837,1.73e-16,161;CL:0000037,1.38e-15,168;CL:0000134,1.90e-07,354;CL:0002320,3.44e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.01e-44;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.08e-07;1!DOID:0060061;3.08e-07;1!DOID:8691;3.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.36e-07,1;DOID:0060061,3.36e-07,1;DOID:8691,3.36e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.40e-29!80;UBERON:0001474!4.23e-26!86;UBERON:0002390!1.65e-24!102;UBERON:0003061!1.65e-24!102;UBERON:0004765!8.93e-23!101;UBERON:0001434!8.93e-23!101;UBERON:0002193!3.81e-21!112;UBERON:0002204!2.06e-19!167;UBERON:0002405!1.82e-16!115;UBERON:0002384!1.66e-12!375;UBERON:0003081!2.34e-08!216;UBERON:0002097!3.58e-07!40;UBERON:0002199!6.11e-07!45;UBERON:0002416!6.11e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.27e-37,76;UBERON:0002390,3.62e-36,98;UBERON:0003061,3.62e-36,98;UBERON:0001474,6.83e-34,82;UBERON:0002193,2.43e-32,108;UBERON:0004765,1.83e-30,90;UBERON:0002405,2.49e-29,93;UBERON:0001434,6.07e-27,100;UBERON:0003081,1.14e-14,203;UBERON:0002204,3.66e-14,167;UBERON:0000926,2.60e-08,315;UBERON:0004120,2.60e-08,315;UBERON:0006603,2.60e-08,315;UBERON:0002384,1.40e-07,371 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0,0.217010870715852,0,0,0,0.145398238779565,0.377875943688809,0.485168122375632,2.09186133215116,2.05583944010913,4.33588919253145,2.01384674625505,0.768482119587302,4.49316236788312,4.82643953031266,3.87290810150296,5.41705946377367,1.12945403725563,0.545812300115692,3.37085226667627,5.20342617030534,3.53021929783703,1.27867425159808,0.659702600373432,0.398927315243264,0,2.03146467040009,1.70215567407342,0.622822248995575,8.79370328398601,5.73631210262222,9.33912032232002,1.81619850790011,2.94622108790052,3.79754864929061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.358779271377724,0,0.423863802319124,0,0.206105058476878,0.515281080091258,0,0.506328996723799,0,0.757301322732344,0.0920498986422993,0,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0.464367928031979,1.44375896333917,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.868687840005475,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0.657017248110473,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0.644521469209642,0.435050081742686,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0.636406495851874,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403599414382095,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0.824019371133798,0,0,0,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.9834227099366,10.9971905662388,13.8881192842256,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483781656445426,0.292357268344742,0.492692742319255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.46908502274835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,0.77380195455795,0,0,0,0,0,0.717149357331379,0,0,0,0,0,0,0.979762080328227,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.467426619694449,1.66441758450784,0.757612021100357,0,1.77962244319307,0.228840068396924,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0.194860308839388,0,0,0,0,0,5.19967229222818,0,0,0,1.28874165176289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:50429597..50429636,- | |||
}} |
Revision as of 23:28, 11 January 2014
Short description: | p@chr15:50429597..50429636, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:50429597..50429636, - |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.13e-60 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.13e-60 | 42 |
defensive cell | 4.09e-52 | 48 |
phagocyte | 4.09e-52 | 48 |
macrophage dendritic cell progenitor | 4.72e-43 | 61 |
monopoietic cell | 9.54e-41 | 59 |
monocyte | 9.54e-41 | 59 |
monoblast | 9.54e-41 | 59 |
promonocyte | 9.54e-41 | 59 |
granulocyte monocyte progenitor cell | 8.04e-39 | 67 |
myeloid lineage restricted progenitor cell | 5.39e-36 | 66 |
myeloid leukocyte | 1.20e-32 | 72 |
hematopoietic lineage restricted progenitor cell | 7.22e-24 | 120 |
nongranular leukocyte | 5.66e-23 | 115 |
myeloid cell | 2.30e-22 | 108 |
common myeloid progenitor | 2.30e-22 | 108 |
leukocyte | 1.83e-20 | 136 |
hematopoietic cell | 2.45e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.73e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-16 | 161 |
hematopoietic stem cell | 1.38e-15 | 168 |
mesenchymal cell | 1.90e-07 | 354 |
connective tissue cell | 3.44e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.27e-37 | 76 |
hematopoietic system | 3.62e-36 | 98 |
blood island | 3.62e-36 | 98 |
bone element | 6.83e-34 | 82 |
hemolymphoid system | 2.43e-32 | 108 |
skeletal element | 1.83e-30 | 90 |
immune system | 2.49e-29 | 93 |
skeletal system | 6.07e-27 | 100 |
lateral plate mesoderm | 1.14e-14 | 203 |
musculoskeletal system | 3.66e-14 | 167 |
mesoderm | 2.60e-08 | 315 |
mesoderm-derived structure | 2.60e-08 | 315 |
presumptive mesoderm | 2.60e-08 | 315 |
connective tissue | 1.40e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.36e-07 | 1 |
cutaneous T cell lymphoma | 3.36e-07 | 1 |
mycosis fungoides | 3.36e-07 | 1 |