FFCP PHASE1:Hg19::chr16:27548256..27548258,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:27548256..27548258,- | |||
|id=chr16:27548256..27548258,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;8.34e-18;2!CL:1000398;8.34e-18;2!CL:0000306;1.38e-09;4!CL:0002222;1.38e-09;4!CL:0002224;1.38e-09;4!CL:0000333;6.33e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,6.48e-18,2;CL:1000398,6.48e-18,2;CL:0000306,1.57e-09,4;CL:0002222,1.57e-09,4;CL:0002224,1.57e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0008814;8.34e-18;2!UBERON:0010056;8.34e-18;2 | |||
|ontology_enrichment_disease=DOID:162!1.46e-11!235;DOID:14566!4.73e-11!239;DOID:305!1.10e-07!106;DOID:1749!5.22e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:169;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.48e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;8.34e-18;2!UBERON:0003497;8.34e-18;2!UBERON:0003909;8.34e-18;2!UBERON:0003835;8.34e-18;2!UBERON:0001723;2.45e-12;3!UBERON:0001280;2.45e-12;3!UBERON:0004647;2.45e-12;3!UBERON:0001033;2.45e-12;3!UBERON:0003343;1.38e-09;4!UBERON:0010077;1.38e-09;4!UBERON:0005389;1.38e-09;4!UBERON:0000484;1.38e-09;4!UBERON:0004785;1.38e-09;4!UBERON:0000965;1.38e-09;4!UBERON:0001803;1.38e-09;4!UBERON:0000013;6.33e-08;5!UBERON:0002410;6.33e-08;5!UBERON:0000974;8.25e-07;6!UBERON:0000020;9.95e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,6.48e-18,2;UBERON:0003497,6.48e-18,2;UBERON:0003909,6.48e-18,2;UBERON:0003835,6.48e-18,2;UBERON:0001723,1.85e-12,3;UBERON:0001033,1.85e-12,3;UBERON:0010056,1.85e-12,3;UBERON:0001280,2.07e-12,3;UBERON:0004647,2.07e-12,3;UBERON:0005171,2.07e-12,3;UBERON:0003343,1.12e-09,4;UBERON:0004785,1.12e-09,4;UBERON:0010077,1.57e-09,4;UBERON:0005389,1.57e-09,4;UBERON:0000484,1.57e-09,4;UBERON:0002546,1.57e-09,4;UBERON:0000965,1.57e-09,4;UBERON:0001803,1.57e-09,4;UBERON:0003073,1.57e-09,4;UBERON:0005426,1.57e-09,4;UBERON:0000013,6.55e-08,5;UBERON:0002410,6.55e-08,5;UBERON:0002394,7.58e-07,6;UBERON:0003928,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0.919421224478927,0.30120591877825,0,0,0,0.293600439334847,0.553995408531877,0,0.868043482863407,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0.641858054152187,1.27867425159808,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0.949387162322653,0.211255286311942,0,0.628975936525128,0.22465726229299,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.268675568108545,0,0,0,0.088048434013226,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448340575974109,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0.159426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0.329607748453519,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.524759999977174,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0.189753732724185,0.158936578980379,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0,0,0,0.137041924646751,0.397429223405979,0,0,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0.235694034616795,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19730191562487,1.06720276974141,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.499921631848426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0.19998739585493,0,0.172214979660816,0,0.552317850755522,0,0,0,0,1.25812753484717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,1.73288499225507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.230467975111559,0,0,0,0.709163045303809,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.218531143927391,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr16:27548256..27548258,- | |||
}} |
Revision as of 02:54, 12 January 2014
Short description: | p@chr16:27548256..27548258, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:27548256..27548258, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 6.48e-18 | 2 |
endothelial cell of hepatic sinusoid | 6.48e-18 | 2 |
crystallin accumulating cell | 1.57e-09 | 4 |
vertebrate lens cell | 1.57e-09 | 4 |
lens epithelial cell | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 6.48e-18 | 2 |
abdomen blood vessel | 6.48e-18 | 2 |
sinusoid | 6.48e-18 | 2 |
abdominal segment blood vessel | 6.48e-18 | 2 |
tongue | 1.85e-12 | 3 |
gustatory system | 1.85e-12 | 3 |
future tongue | 1.85e-12 | 3 |
liver parenchyma | 2.07e-12 | 3 |
liver lobule | 2.07e-12 | 3 |
hepatic duct | 2.07e-12 | 3 |
mucosa of oral region | 1.12e-09 | 4 |
respiratory system mucosa | 1.12e-09 | 4 |
cuboidal epithelium | 1.57e-09 | 4 |
transparent eye structure | 1.57e-09 | 4 |
simple cuboidal epithelium | 1.57e-09 | 4 |
cranial placode | 1.57e-09 | 4 |
lens of camera-type eye | 1.57e-09 | 4 |
epithelium of lens | 1.57e-09 | 4 |
lens placode | 1.57e-09 | 4 |
lens vesicle | 1.57e-09 | 4 |
sympathetic nervous system | 6.55e-08 | 5 |
autonomic nervous system | 6.55e-08 | 5 |
bile duct | 7.58e-07 | 6 |
digestive system duct | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.48e-07 | 6 |